RNA–Protein interactions for RNA: ENST00000487615.5

TRA2B-214, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 4,485 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-214ENST00000487615 NHSQ6T4R5 1651 aa12.23□□□□□ -0.45
TRA2B-214ENST00000487615 ENO1P06733 434 aaKnown RBP12.23□□□□□ -0.45
TRA2B-214ENST00000487615 PYGBP11216 843 aa12.23□□□□□ -0.45
TRA2B-214ENST00000487615 PGM1P36871 562 aa12.23□□□□□ -0.45
TRA2B-214ENST00000487615 GRM5P41594 1212 aa12.23□□□□□ -0.45
TRA2B-214ENST00000487615 DCAF12L1Q5VU92 463 aa12.23□□□□□ -0.45
TRA2B-214ENST00000487615 KDELC2Q7Z4H8 507 aa12.23□□□□□ -0.45
TRA2B-214ENST00000487615 LONP2Q86WA8 852 aa12.23□□□□□ -0.45
TRA2B-214ENST00000487615 DCP1BQ8IZD4 617 aaKnown RBP12.23□□□□□ -0.45
TRA2B-214ENST00000487615 DEFB106AQ8N104 65 aa12.23□□□□□ -0.45
TRA2B-214ENST00000487615 LMO3Q8TAP4 145 aa12.23□□□□□ -0.45
TRA2B-214ENST00000487615 EXT2Q93063 718 aa12.23□□□□□ -0.45
TRA2B-214ENST00000487615 CPXM1Q96SM3 734 aa12.23□□□□□ -0.45
TRA2B-214ENST00000487615 ZNF112Q9UJU3 913 aa12.23□□□□□ -0.45
TRA2B-214ENST00000487615 PCDHGC3Q9UN70 934 aa12.23□□□□□ -0.45
TRA2B-214ENST00000487615 XIRP1Q702N8 1843 aaKnown RBP12.22□□□□□ -0.45
TRA2B-214ENST00000487615 A0A0G2JLL6 359 aaPredicted RBP12.22□□□□□ -0.45
TRA2B-214ENST00000487615 VNN1O95497 513 aa12.22□□□□□ -0.45
TRA2B-214ENST00000487615 CCDC130P13994 396 aa12.22□□□□□ -0.45
TRA2B-214ENST00000487615 RAD23BP54727 409 aa12.22□□□□□ -0.45
TRA2B-214ENST00000487615 TPD52P55327 224 aaPredicted RBP12.22□□□□□ -0.45
TRA2B-214ENST00000487615 USP10Q14694 798 aaKnown RBP12.22□□□□□ -0.45
TRA2B-214ENST00000487615 PCBP1Q15365 356 aaKnown RBP eCLIP12.22□□□□□ -0.45
TRA2B-214ENST00000487615 PRRT2Q7Z6L0 340 aaPredicted RBP12.22□□□□□ -0.45
TRA2B-214ENST00000487615 C1orf127Q8N9H9 656 aa12.22□□□□□ -0.45
TRA2B-214ENST00000487615 CKAP2Q8WWK9 683 aa12.22□□□□□ -0.45
TRA2B-214ENST00000487615 RXFP1Q9HBX9 757 aa12.22□□□□□ -0.45
TRA2B-214ENST00000487615 EFR3BQ9Y2G0 817 aa12.22□□□□□ -0.45
TRA2B-214ENST00000487615 KPNA6O60684 536 aa12.22□□□□□ -0.45
TRA2B-214ENST00000487615 MYCP01106 439 aaPredicted RBP12.22□□□□□ -0.45
TRA2B-214ENST00000487615 RPLP2P05387 115 aaKnown RBP12.22□□□□□ -0.45
TRA2B-214ENST00000487615 AMPD1P23109 780 aa12.22□□□□□ -0.45
TRA2B-214ENST00000487615 TARSP26639 723 aaKnown RBP12.22□□□□□ -0.45
TRA2B-214ENST00000487615 ZNF235Q14590 738 aa12.22□□□□□ -0.45
TRA2B-214ENST00000487615 CYP1B1Q16678 543 aa12.22□□□□□ -0.45
TRA2B-214ENST00000487615 PAN2Q504Q3 1202 aaKnown RBP12.22□□□□□ -0.45
TRA2B-214ENST00000487615 KCNT2Q6UVM3 1135 aa12.22□□□□□ -0.45
TRA2B-214ENST00000487615 TRIM67Q6ZTA4 783 aa12.22□□□□□ -0.45
TRA2B-214ENST00000487615 GPR142Q7Z601 462 aa12.22□□□□□ -0.45
TRA2B-214ENST00000487615 COLGALT1Q8NBJ5 622 aa12.22□□□□□ -0.45
TRA2B-214ENST00000487615 HIPK4Q8NE63 616 aa12.22□□□□□ -0.45
TRA2B-214ENST00000487615 AGR3Q8TD06 166 aa12.22□□□□□ -0.45
TRA2B-214ENST00000487615 TCP10LQ8TDR4 215 aa12.22□□□□□ -0.45
TRA2B-214ENST00000487615 FNIP1Q8TF40 1166 aa12.22□□□□□ -0.45
TRA2B-214ENST00000487615 PPP1R2P1Q96PQ5 205 aa12.22□□□□□ -0.45
TRA2B-214ENST00000487615 RNF157Q96PX1 679 aa12.22□□□□□ -0.45
TRA2B-214ENST00000487615 UBXN6Q9BZV1 441 aa12.22□□□□□ -0.45
TRA2B-214ENST00000487615 RNF19AQ9NV58 838 aa12.22□□□□□ -0.45
TRA2B-214ENST00000487615 NSMCE4AQ9NXX6 385 aa12.22□□□□□ -0.45
TRA2B-214ENST00000487615 COL1A2P08123 1366 aa12.22□□□□□ -0.45
TRA2B-214ENST00000487615 LAMB1P07942 1786 aa12.22□□□□□ -0.45
TRA2B-214ENST00000487615 NQO1P15559 274 aaKnown RBP12.22□□□□□ -0.45
TRA2B-214ENST00000487615 SPATA24Q86W54 205 aa12.22□□□□□ -0.45
TRA2B-214ENST00000487615 IPMKQ8NFU5 416 aa12.22□□□□□ -0.45
TRA2B-214ENST00000487615 HTR3CQ8WXA8 447 aa12.22□□□□□ -0.45
TRA2B-214ENST00000487615 PTPRN2Q92932 1015 aa12.22□□□□□ -0.45
TRA2B-214ENST00000487615 TTC1Q99614 292 aa12.22□□□□□ -0.45
TRA2B-214ENST00000487615 SPON2Q9BUD6 331 aa12.22□□□□□ -0.45
TRA2B-214ENST00000487615 GRHL1Q9NZI5 618 aa12.22□□□□□ -0.45
TRA2B-214ENST00000487615 TJP2Q9UDY2 1190 aa12.22□□□□□ -0.45
TRA2B-214ENST00000487615 SHANK3Q9BYB0 1731 aa12.22□□□□□ -0.45
TRA2B-214ENST00000487615 GPR25O00155 361 aa12.21□□□□□ -0.45
TRA2B-214ENST00000487615 GLRA3O75311 464 aa12.21□□□□□ -0.45
TRA2B-214ENST00000487615 SREBF2Q12772 1141 aa12.21□□□□□ -0.45
TRA2B-214ENST00000487615 LRRC52Q8N7C0 313 aa12.21□□□□□ -0.45
TRA2B-214ENST00000487615 C12orf29Q8N999 325 aa12.21□□□□□ -0.45
TRA2B-214ENST00000487615 PABPC5Q96DU9 382 aaKnown RBP12.21□□□□□ -0.45
TRA2B-214ENST00000487615 SNRNP25Q9BV90 132 aaKnown RBP12.21□□□□□ -0.45
TRA2B-214ENST00000487615 HEY2Q9UBP5 337 aa12.21□□□□□ -0.45
TRA2B-214ENST00000487615 LTBP3Q9NS15 1303 aa12.21□□□□□ -0.45
TRA2B-214ENST00000487615 SNX3O60493 162 aa12.21□□□□□ -0.45
TRA2B-214ENST00000487615 MSCO60682 206 aa12.21□□□□□ -0.45
TRA2B-214ENST00000487615 OPHN1O60890 802 aa12.21□□□□□ -0.45
TRA2B-214ENST00000487615 CILPO75339 1184 aa12.21□□□□□ -0.45
TRA2B-214ENST00000487615 S100BP04271 92 aaPredicted RBP12.21□□□□□ -0.45
TRA2B-214ENST00000487615 CCND1P24385 295 aa12.21□□□□□ -0.45
TRA2B-214ENST00000487615 YY1P25490 414 aa12.21□□□□□ -0.45
TRA2B-214ENST00000487615 CNTFP26441 200 aa12.21□□□□□ -0.45
TRA2B-214ENST00000487615 FCGRTP55899 365 aa12.21□□□□□ -0.45
TRA2B-214ENST00000487615 LINC00523Q86TU6 105 aa12.21□□□□□ -0.45
TRA2B-214ENST00000487615 CPNE8Q86YQ8 564 aa12.21□□□□□ -0.45
TRA2B-214ENST00000487615 APBB2Q92870 758 aa12.21□□□□□ -0.45
TRA2B-214ENST00000487615 HSFY1Q96LI6 401 aa12.21□□□□□ -0.45
TRA2B-214ENST00000487615 LRGUKQ96M69 825 aa12.21□□□□□ -0.45
TRA2B-214ENST00000487615 LRRC40Q9H9A6 602 aa12.21□□□□□ -0.45
TRA2B-214ENST00000487615 NOD2Q9HC29 1040 aa12.21□□□□□ -0.45
TRA2B-214ENST00000487615 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.21□□□□□ -0.45
TRA2B-214ENST00000487615 TIMM13Q9Y5L4 95 aaPredicted RBP12.21□□□□□ -0.45
TRA2B-214ENST00000487615 CNTNAP2Q9UHC6 1331 aa12.21□□□□□ -0.45
TRA2B-214ENST00000487615 LRCH4O75427 683 aa12.21□□□□□ -0.46
TRA2B-214ENST00000487615 FSBPO95073 299 aa12.21□□□□□ -0.46
TRA2B-214ENST00000487615 SMIM10L2AP0DMW4 78 aa12.21□□□□□ -0.46
TRA2B-214ENST00000487615 SMIM10L2BP0DMW5 78 aa12.21□□□□□ -0.46
TRA2B-214ENST00000487615 DRD4P21917 467 aa12.21□□□□□ -0.46
TRA2B-214ENST00000487615 OR1G1P47890 313 aa12.21□□□□□ -0.46
TRA2B-214ENST00000487615 BMPR2Q13873 1038 aa12.21□□□□□ -0.46
TRA2B-214ENST00000487615 DUSP28Q4G0W2 176 aa12.21□□□□□ -0.46
TRA2B-214ENST00000487615 SH2D4BQ5SQS7 431 aa12.21□□□□□ -0.46
TRA2B-214ENST00000487615 MFSD5Q6N075 450 aa12.21□□□□□ -0.46
TRA2B-214ENST00000487615 NPNTQ6UXI9 565 aa12.21□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms