RNA–Protein interactions for RNA: ENST00000486964.5

POLR1A-208, Transcript of RNA polymerase I subunit A, humanhuman

TSL 5

Gene POLR1A, Length 1,427 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1A-208ENST00000486964 KANSL3Q9P2N6 904 aa10.03□□□□□ -0.8
POLR1A-208ENST00000486964 CACNG4Q9UBN1 327 aa10.03□□□□□ -0.8
POLR1A-208ENST00000486964 ANAPC5Q9UJX4 755 aa10.03□□□□□ -0.8
POLR1A-208ENST00000486964 TSPAN16Q9UKR8 245 aa10.03□□□□□ -0.8
POLR1A-208ENST00000486964 SCN1AP35498 2009 aa10.02□□□□□ -0.81
POLR1A-208ENST00000486964 FAM170AA1A519 330 aa10.02□□□□□ -0.81
POLR1A-208ENST00000486964 PQBP1O60828 265 aaKnown RBP10.02□□□□□ -0.81
POLR1A-208ENST00000486964 DDHD2O94830 711 aa10.02□□□□□ -0.81
POLR1A-208ENST00000486964 PDGFRBP09619 1106 aa10.02□□□□□ -0.81
POLR1A-208ENST00000486964 PTPN1P18031 435 aaKnown RBP10.02□□□□□ -0.81
POLR1A-208ENST00000486964 STX2P32856 288 aa10.02□□□□□ -0.81
POLR1A-208ENST00000486964 LHX1P48742 406 aa10.02□□□□□ -0.81
POLR1A-208ENST00000486964 ATN1P54259 1190 aaPredicted RBP10.02□□□□□ -0.81
POLR1A-208ENST00000486964 IL9RQ01113 521 aa10.02□□□□□ -0.81
POLR1A-208ENST00000486964 TAP1Q03518 808 aa10.02□□□□□ -0.81
POLR1A-208ENST00000486964 RASA2Q15283 850 aa10.02□□□□□ -0.81
POLR1A-208ENST00000486964 TRIM60Q495X7 471 aa10.02□□□□□ -0.81
POLR1A-208ENST00000486964 NOMO2Q5JPE7 1267 aa10.02□□□□□ -0.81
POLR1A-208ENST00000486964 RNF43Q68DV7 783 aa10.02□□□□□ -0.81
POLR1A-208ENST00000486964 HIBCHQ6NVY1 386 aaPredicted RBP10.02□□□□□ -0.81
POLR1A-208ENST00000486964 AADACL2Q6P093 401 aa10.02□□□□□ -0.81
POLR1A-208ENST00000486964 GLB1LQ6UWU2 654 aa10.02□□□□□ -0.81
POLR1A-208ENST00000486964 EXOC3L1Q86VI1 746 aa10.02□□□□□ -0.81
POLR1A-208ENST00000486964 ZNF280BQ86YH2 543 aa10.02□□□□□ -0.81
POLR1A-208ENST00000486964 CPNE8Q86YQ8 564 aa10.02□□□□□ -0.81
POLR1A-208ENST00000486964 ADGRF2Q8IZF7 708 aa10.02□□□□□ -0.81
POLR1A-208ENST00000486964 EXD1Q8NHP7 514 aa10.02□□□□□ -0.81
POLR1A-208ENST00000486964 UBA3Q8TBC4 463 aa10.02□□□□□ -0.81
POLR1A-208ENST00000486964 RSRC1Q96IZ7 334 aaKnown RBP10.02□□□□□ -0.81
POLR1A-208ENST00000486964 SUSD3Q96L08 255 aa10.02□□□□□ -0.81
POLR1A-208ENST00000486964 CASD1Q96PB1 797 aa10.02□□□□□ -0.81
POLR1A-208ENST00000486964 PKMYT1Q99640 499 aa10.02□□□□□ -0.81
POLR1A-208ENST00000486964 LPIN3Q9BQK8 851 aa10.02□□□□□ -0.81
POLR1A-208ENST00000486964 RTP3Q9BQQ7 232 aa10.02□□□□□ -0.81
POLR1A-208ENST00000486964 SNX25Q9H3E2 840 aa10.02□□□□□ -0.81
POLR1A-208ENST00000486964 HIPK3Q9H422 1215 aa10.02□□□□□ -0.81
POLR1A-208ENST00000486964 RXFP1Q9HBX9 757 aa10.02□□□□□ -0.81
POLR1A-208ENST00000486964 CD248Q9HCU0 757 aa10.02□□□□□ -0.81
POLR1A-208ENST00000486964 CYLDQ9NQC7 956 aa10.02□□□□□ -0.81
POLR1A-208ENST00000486964 TXLNGQ9NUQ3 528 aa10.02□□□□□ -0.81
POLR1A-208ENST00000486964 KLHL14Q9P2G3 628 aa10.02□□□□□ -0.81
POLR1A-208ENST00000486964 TJP2Q9UDY2 1190 aa10.02□□□□□ -0.81
POLR1A-208ENST00000486964 STRIP2Q9ULQ0 834 aa10.02□□□□□ -0.81
POLR1A-208ENST00000486964 SMG5Q9UPR3 1016 aaKnown RBP10.02□□□□□ -0.81
POLR1A-208ENST00000486964 CEP83Q9Y592 693 aa10.02□□□□□ -0.81
POLR1A-208ENST00000486964 PDCD11Q14690 1871 aaKnown RBP10.01□□□□□ -0.81
POLR1A-208ENST00000486964 CASTOR2A6NHX0 329 aa10.01□□□□□ -0.81
POLR1A-208ENST00000486964 WFS1O76024 890 aa10.01□□□□□ -0.81
POLR1A-208ENST00000486964 ACSL3O95573 720 aa10.01□□□□□ -0.81
POLR1A-208ENST00000486964 ERBB2P04626 1255 aa10.01□□□□□ -0.81
POLR1A-208ENST00000486964 BRAFP15056 766 aa10.01□□□□□ -0.81
POLR1A-208ENST00000486964 TYMPP19971 482 aa10.01□□□□□ -0.81
POLR1A-208ENST00000486964 ELF1P32519 619 aa10.01□□□□□ -0.81
POLR1A-208ENST00000486964 ADCY8P40145 1251 aa10.01□□□□□ -0.81
POLR1A-208ENST00000486964 SLCO1A2P46721 670 aa10.01□□□□□ -0.81
POLR1A-208ENST00000486964 IFNAR2P48551 515 aa10.01□□□□□ -0.81
POLR1A-208ENST00000486964 ITGA8P53708 1063 aa10.01□□□□□ -0.81
POLR1A-208ENST00000486964 COPS2P61201 443 aa10.01□□□□□ -0.81
POLR1A-208ENST00000486964 RPL7AP62424 266 aaKnown RBP10.01□□□□□ -0.81
POLR1A-208ENST00000486964 OGDHQ02218 1023 aa10.01□□□□□ -0.81
POLR1A-208ENST00000486964 ZNF252P-AS1Q0IIN9 211 aa10.01□□□□□ -0.81
POLR1A-208ENST00000486964 GALNTL6Q49A17 601 aa10.01□□□□□ -0.81
POLR1A-208ENST00000486964 SPDYAQ5MJ70 313 aa10.01□□□□□ -0.81
POLR1A-208ENST00000486964 PMF1Q6P1K2 205 aa10.01□□□□□ -0.81
POLR1A-208ENST00000486964 FAM171BQ6P995 826 aa10.01□□□□□ -0.81
POLR1A-208ENST00000486964 DRICH1Q6PGQ1 229 aaPredicted RBP10.01□□□□□ -0.81
POLR1A-208ENST00000486964 PHLDB2Q86SQ0 1253 aa10.01□□□□□ -0.81
POLR1A-208ENST00000486964 CEP57Q86XR8 500 aa10.01□□□□□ -0.81
POLR1A-208ENST00000486964 TDRPQ86YL5 185 aa10.01□□□□□ -0.81
POLR1A-208ENST00000486964 ZDHHC14Q8IZN3 488 aa10.01□□□□□ -0.81
POLR1A-208ENST00000486964 ZCCHC9Q8N567 271 aaKnown RBP10.01□□□□□ -0.81
POLR1A-208ENST00000486964 NIPA2Q8N8Q9 360 aa10.01□□□□□ -0.81
POLR1A-208ENST00000486964 RNF169Q8NCN4 708 aa10.01□□□□□ -0.81
POLR1A-208ENST00000486964 B3GALNT2Q8NCR0 500 aa10.01□□□□□ -0.81
POLR1A-208ENST00000486964 FNIP1Q8TF40 1166 aa10.01□□□□□ -0.81
POLR1A-208ENST00000486964 RSPH1Q8WYR4 309 aa10.01□□□□□ -0.81
POLR1A-208ENST00000486964 TNIP3Q96KP6 325 aa10.01□□□□□ -0.81
POLR1A-208ENST00000486964 FRMD8P1Q9BZ68 369 aaPredicted RBP10.01□□□□□ -0.81
POLR1A-208ENST00000486964 CXorf56Q9H5V9 222 aa10.01□□□□□ -0.81
POLR1A-208ENST00000486964 NOD2Q9HC29 1040 aa10.01□□□□□ -0.81
POLR1A-208ENST00000486964 CRTAC1Q9NQ79 661 aa10.01□□□□□ -0.81
POLR1A-208ENST00000486964 TBC1D13Q9NVG8 400 aa10.01□□□□□ -0.81
POLR1A-208ENST00000486964 TRIP11Q15643 1979 aa10□□□□□ -0.81
POLR1A-208ENST00000486964 TCRBV7S2A1N4TA0A589 114 aa10□□□□□ -0.81
POLR1A-208ENST00000486964 TCP11X1B4DZS4 312 aa10□□□□□ -0.81
POLR1A-208ENST00000486964 M0QYV0 167 aa10□□□□□ -0.81
POLR1A-208ENST00000486964 ATP2C2O75185 946 aa10□□□□□ -0.81
POLR1A-208ENST00000486964 B3GAT3O94766 335 aa10□□□□□ -0.81
POLR1A-208ENST00000486964 EFEMP2O95967 443 aa10□□□□□ -0.81
POLR1A-208ENST00000486964 ALADP13716 330 aa10□□□□□ -0.81
POLR1A-208ENST00000486964 NQO1P15559 274 aaKnown RBP10□□□□□ -0.81
POLR1A-208ENST00000486964 CYP2C18P33260 490 aa10□□□□□ -0.81
POLR1A-208ENST00000486964 PTPN7P35236 360 aa10□□□□□ -0.81
POLR1A-208ENST00000486964 RFC2P35250 354 aa10□□□□□ -0.81
POLR1A-208ENST00000486964 SCNN1AP37088 669 aa10□□□□□ -0.81
POLR1A-208ENST00000486964 SLC8A3P57103 927 aa10□□□□□ -0.81
POLR1A-208ENST00000486964 PLCB3Q01970 1234 aa10□□□□□ -0.81
POLR1A-208ENST00000486964 PDE4CQ08493 712 aa10□□□□□ -0.81
POLR1A-208ENST00000486964 BNIP1Q12981 228 aa10□□□□□ -0.81
POLR1A-208ENST00000486964 KLF1Q13351 362 aaPredicted RBP10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms