RNA–Protein interactions for RNA: ENST00000485985.1

LMBR1-217, Transcript of limb development membrane protein 1, humanhuman

TSL 2

Gene LMBR1, Length 644 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-217ENST00000485985 PMS1P54277 932 aaKnown RBP22.03■■□□□ 1.12
LMBR1-217ENST00000485985 LY6G5CQ5SRR4 150 aa22.03■■□□□ 1.12
LMBR1-217ENST00000485985 PMS2CLQ68D20 193 aa22.03■■□□□ 1.12
LMBR1-217ENST00000485985 C11orf74Q86VG3 221 aa22.03■■□□□ 1.12
LMBR1-217ENST00000485985 RASSF3Q86WH2 238 aa22.03■■□□□ 1.12
LMBR1-217ENST00000485985 BBS7Q8IWZ6 715 aa22.03■■□□□ 1.12
LMBR1-217ENST00000485985 CYFIP2Q96F07 1278 aa22.03■■□□□ 1.12
LMBR1-217ENST00000485985 ARID3AQ99856 593 aa22.03■■□□□ 1.12
LMBR1-217ENST00000485985 TBC1D14Q9P2M4 693 aa22.03■■□□□ 1.12
LMBR1-217ENST00000485985 ZFHX4Q86UP3 3567 aa22.03■■□□□ 1.12
LMBR1-217ENST00000485985 LNP1A1A4G5 178 aa22.02■■□□□ 1.12
LMBR1-217ENST00000485985 TBX18O95935 607 aa22.02■■□□□ 1.12
LMBR1-217ENST00000485985 ADH1CP00326 375 aa22.02■■□□□ 1.12
LMBR1-217ENST00000485985 EPB41P11171 864 aaKnown RBP22.02■■□□□ 1.12
LMBR1-217ENST00000485985 EIF2DP41214 584 aaKnown RBP22.02■■□□□ 1.12
LMBR1-217ENST00000485985 KDSRQ06136 332 aa22.02■■□□□ 1.12
LMBR1-217ENST00000485985 BECN1Q14457 450 aa22.02■■□□□ 1.12
LMBR1-217ENST00000485985 COBLL1Q53SF7 1204 aa22.02■■□□□ 1.12
LMBR1-217ENST00000485985 ZNF658Q5TYW1 1059 aaPredicted RBP22.02■■□□□ 1.12
LMBR1-217ENST00000485985 ANO7Q6IWH7 933 aa22.02■■□□□ 1.12
LMBR1-217ENST00000485985 ZC3H3Q8IXZ2 948 aaKnown RBP22.02■■□□□ 1.12
LMBR1-217ENST00000485985 PHTF2Q8N3S3 785 aa22.02■■□□□ 1.12
LMBR1-217ENST00000485985 SPATA20Q8TB22 786 aa22.02■■□□□ 1.12
LMBR1-217ENST00000485985 CCDC34Q96HJ3 373 aa22.02■■□□□ 1.12
LMBR1-217ENST00000485985 CNOT6LQ96LI5 555 aaKnown RBP22.02■■□□□ 1.12
LMBR1-217ENST00000485985 NMUR1Q9HB89 426 aa22.02■■□□□ 1.12
LMBR1-217ENST00000485985 TLR8Q9NR97 1041 aaKnown RBP22.02■■□□□ 1.12
LMBR1-217ENST00000485985 RMND1Q9NWS8 449 aa22.02■■□□□ 1.12
LMBR1-217ENST00000485985 MMP17Q9ULZ9 603 aa22.02■■□□□ 1.12
LMBR1-217ENST00000485985 SCML2Q9UQR0 700 aa22.02■■□□□ 1.12
LMBR1-217ENST00000485985 SH3BP1Q9Y3L3 701 aa22.02■■□□□ 1.12
LMBR1-217ENST00000485985 TRIM49BA6NDI0 452 aa22.01■■□□□ 1.11
LMBR1-217ENST00000485985 KHNYNO15037 678 aaKnown RBP22.01■■□□□ 1.11
LMBR1-217ENST00000485985 GREM1O60565 184 aa22.01■■□□□ 1.11
LMBR1-217ENST00000485985 NOVA1P51513 510 aaKnown RBP22.01■■□□□ 1.11
LMBR1-217ENST00000485985 CRY1Q16526 586 aa22.01■■□□□ 1.11
LMBR1-217ENST00000485985 CBWD6Q4V339 395 aa22.01■■□□□ 1.11
LMBR1-217ENST00000485985 ZNF394Q53GI3 561 aa22.01■■□□□ 1.11
LMBR1-217ENST00000485985 CBWD3Q5JTY5 395 aa22.01■■□□□ 1.11
LMBR1-217ENST00000485985 CBWD5Q5RIA9 395 aa22.01■■□□□ 1.11
LMBR1-217ENST00000485985 PPP1R26Q5T8A7 1209 aaPredicted RBP22.01■■□□□ 1.11
LMBR1-217ENST00000485985 DAB2IPQ5VWQ8 1189 aa22.01■■□□□ 1.11
LMBR1-217ENST00000485985 CCDC33Q8N5R6 958 aa22.01■■□□□ 1.11
LMBR1-217ENST00000485985 CCDC150Q8NCX0 1101 aa22.01■■□□□ 1.11
LMBR1-217ENST00000485985 FBXL13Q8NEE6 735 aa22.01■■□□□ 1.11
LMBR1-217ENST00000485985 OTUB2Q96DC9 234 aa22.01■■□□□ 1.11
LMBR1-217ENST00000485985 GSDMAQ96QA5 445 aa22.01■■□□□ 1.11
LMBR1-217ENST00000485985 DUSP9Q99956 384 aaKnown RBP22.01■■□□□ 1.11
LMBR1-217ENST00000485985 CYLDQ9NQC7 956 aa22.01■■□□□ 1.11
LMBR1-217ENST00000485985 PCDHA5Q9Y5H7 936 aa22.01■■□□□ 1.11
LMBR1-217ENST00000485985 CEP192Q8TEP8 1941 aa22.01■■□□□ 1.11
LMBR1-217ENST00000485985 GIPC1O14908 333 aa22■■□□□ 1.11
LMBR1-217ENST00000485985 CETN3O15182 167 aa22■■□□□ 1.11
LMBR1-217ENST00000485985 KAT7O95251 611 aa22■■□□□ 1.11
LMBR1-217ENST00000485985 HNRNPLP14866 589 aaKnown RBP eCLIP22■■□□□ 1.115e-9■□□□□ 11.1
LMBR1-217ENST00000485985 TRIM21P19474 475 aaKnown RBP22■■□□□ 1.11
LMBR1-217ENST00000485985 ACO1P21399 889 aaKnown RBP22■■□□□ 1.11
LMBR1-217ENST00000485985 BCKDHBP21953 392 aa22■■□□□ 1.11
LMBR1-217ENST00000485985 MRPS21P82921 87 aaKnown RBP22■■□□□ 1.11
LMBR1-217ENST00000485985 ANKRD40Q6AI12 368 aa22■■□□□ 1.11
LMBR1-217ENST00000485985 ETFBKMTQ8IXQ9 262 aa22■■□□□ 1.11
LMBR1-217ENST00000485985 MDGA1Q8NFP4 955 aa22■■□□□ 1.11
LMBR1-217ENST00000485985 PNKPQ96T60 521 aa22■■□□□ 1.11
LMBR1-217ENST00000485985 KLF16Q9BXK1 252 aaPredicted RBP22■■□□□ 1.11
LMBR1-217ENST00000485985 NACA2Q9H009 215 aa22■■□□□ 1.11
LMBR1-217ENST00000485985 PNPLA8Q9NP80 782 aa22■■□□□ 1.11
LMBR1-217ENST00000485985 CISHQ9NSE2 258 aa22■■□□□ 1.11
LMBR1-217ENST00000485985 RAB20Q9NX57 234 aa22■■□□□ 1.11
LMBR1-217ENST00000485985 A0A1W2PQH9 124 aa21.99■■□□□ 1.11
LMBR1-217ENST00000485985 GOLGA6L4A6NEF3 574 aa21.99■■□□□ 1.11
LMBR1-217ENST00000485985 SLC16A3O15427 465 aaKnown RBP21.99■■□□□ 1.11
LMBR1-217ENST00000485985 HOXC11O43248 304 aaPredicted RBP21.99■■□□□ 1.11
LMBR1-217ENST00000485985 NUCB2P80303 420 aa21.99■■□□□ 1.11
LMBR1-217ENST00000485985 DCAF17Q5H9S7 520 aaPredicted RBP21.99■■□□□ 1.11
LMBR1-217ENST00000485985 SLC4A11Q8NBS3 891 aa21.99■■□□□ 1.11
LMBR1-217ENST00000485985 OLIG1Q8TAK6 271 aa21.99■■□□□ 1.11
LMBR1-217ENST00000485985 TATDN2Q93075 761 aa21.99■■□□□ 1.11
LMBR1-217ENST00000485985 ZDHHC4Q9NPG8 344 aa21.99■■□□□ 1.11
LMBR1-217ENST00000485985 NUDT5Q9UKK9 219 aa21.99■■□□□ 1.11
LMBR1-217ENST00000485985 CFAP47Q6ZTR5 3102 aa21.98■■□□□ 1.11
LMBR1-217ENST00000485985 PATE3B3GLJ2 98 aa21.98■■□□□ 1.11
LMBR1-217ENST00000485985 MDM4O15151 490 aa21.98■■□□□ 1.11
LMBR1-217ENST00000485985 PROS1P07225 676 aa21.98■■□□□ 1.11
LMBR1-217ENST00000485985 KIR2DL1P43626 348 aaPredicted RBP21.98■■□□□ 1.11
LMBR1-217ENST00000485985 KIF11P52732 1056 aa21.98■■□□□ 1.11
LMBR1-217ENST00000485985 RAD23BP54727 409 aa21.98■■□□□ 1.11
LMBR1-217ENST00000485985 GAD2Q05329 585 aa21.98■■□□□ 1.11
LMBR1-217ENST00000485985 SH3PXD2AQ5TCZ1 1133 aa21.98■■□□□ 1.11
LMBR1-217ENST00000485985 TCERG1LQ5VWI1 586 aa21.98■■□□□ 1.11
LMBR1-217ENST00000485985 TMEM92Q6UXU6 159 aa21.98■■□□□ 1.11
LMBR1-217ENST00000485985 CYP2U1Q7Z449 544 aa21.98■■□□□ 1.11
LMBR1-217ENST00000485985 TTC30AQ86WT1 665 aa21.98■■□□□ 1.11
LMBR1-217ENST00000485985 TMEM25Q86YD3 366 aa21.98■■□□□ 1.11
LMBR1-217ENST00000485985 ALLCQ8N6M5 410 aa21.98■■□□□ 1.11
LMBR1-217ENST00000485985 IL17RCQ8NAC3 791 aa21.98■■□□□ 1.11
LMBR1-217ENST00000485985 SMARCE1Q969G3 411 aa21.98■■□□□ 1.11
LMBR1-217ENST00000485985 DUSP16Q9BY84 665 aa21.98■■□□□ 1.11
LMBR1-217ENST00000485985 TMEM9BQ9NQ34 198 aa21.98■■□□□ 1.11
LMBR1-217ENST00000485985 ARHGEF4Q9NR80 690 aa21.98■■□□□ 1.11
LMBR1-217ENST00000485985 SPHK2Q9NRA0 654 aa21.98■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms