RNA–Protein interactions for RNA: ENST00000485972.5

CDK5-204, Transcript of cyclin dependent kinase 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5, Length 1,758 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5-204ENST00000485972 USP3Q9Y6I4 520 aa22.69■■□□□ 1.22
CDK5-204ENST00000485972 MDM4O15151 490 aa22.68■■□□□ 1.22
CDK5-204ENST00000485972 EPHB4P54760 987 aa22.68■■□□□ 1.22
CDK5-204ENST00000485972 ARPP19P56211 112 aa22.68■■□□□ 1.22
CDK5-204ENST00000485972 ZC3H12AQ5D1E8 599 aaKnown RBP22.68■■□□□ 1.22
CDK5-204ENST00000485972 SPOUT1Q5T280 376 aaKnown RBP22.68■■□□□ 1.22
CDK5-204ENST00000485972 ERMARDQ5T6L9 678 aa22.68■■□□□ 1.22
CDK5-204ENST00000485972 DUPD1Q68J44 220 aa22.68■■□□□ 1.22
CDK5-204ENST00000485972 BHLHA9Q7RTU4 235 aa22.68■■□□□ 1.22
CDK5-204ENST00000485972 RFX6Q8HWS3 928 aa22.68■■□□□ 1.22
CDK5-204ENST00000485972 SCML4Q8N228 414 aa22.68■■□□□ 1.22
CDK5-204ENST00000485972 SCAMP5Q8TAC9 235 aa22.68■■□□□ 1.22
CDK5-204ENST00000485972 GRK7Q8WTQ7 553 aa22.68■■□□□ 1.22
CDK5-204ENST00000485972 PGLYRP2Q96PD5 576 aa22.68■■□□□ 1.22
CDK5-204ENST00000485972 MAK16Q9BXY0 300 aaKnown RBP22.68■■□□□ 1.22
CDK5-204ENST00000485972 GPATCH2LQ9NWQ4 482 aa22.68■■□□□ 1.22
CDK5-204ENST00000485972 CST8O60676 142 aa22.68■■□□□ 1.22
CDK5-204ENST00000485972 NCAM1P13591 858 aa22.68■■□□□ 1.22
CDK5-204ENST00000485972 TNNT3P45378 269 aaPredicted RBP22.68■■□□□ 1.22
CDK5-204ENST00000485972 WDR5P61964 334 aaKnown RBP22.68■■□□□ 1.22
CDK5-204ENST00000485972 DYNLT1P63172 113 aa22.68■■□□□ 1.22
CDK5-204ENST00000485972 DPYSL3Q14195 570 aa22.68■■□□□ 1.22
CDK5-204ENST00000485972 HLTFQ14527 1009 aaKnown RBP eCLIP22.68■■□□□ 1.22
CDK5-204ENST00000485972 EMBQ6PCB8 327 aa22.68■■□□□ 1.22
CDK5-204ENST00000485972 VSTM1Q6UX27 236 aa22.68■■□□□ 1.22
CDK5-204ENST00000485972 BBS12Q6ZW61 710 aa22.68■■□□□ 1.22
CDK5-204ENST00000485972 ANKS3Q6ZW76 656 aa22.68■■□□□ 1.22
CDK5-204ENST00000485972 ZNF689Q96CS4 500 aaPredicted RBP22.68■■□□□ 1.22
CDK5-204ENST00000485972 CCDC114Q96M63 670 aa22.68■■□□□ 1.22
CDK5-204ENST00000485972 GDAP1L1Q96MZ0 367 aa22.68■■□□□ 1.22
CDK5-204ENST00000485972 FAM114A2Q9NRY5 505 aa22.68■■□□□ 1.22
CDK5-204ENST00000485972 PCDH10Q9P2E7 1040 aa22.68■■□□□ 1.22
CDK5-204ENST00000485972 KIAA0100Q14667 2235 aaKnown RBP22.67■■□□□ 1.22
CDK5-204ENST00000485972 M0QYT0 321 aa22.67■■□□□ 1.22
CDK5-204ENST00000485972 TNFRSF10BO14763 440 aa22.67■■□□□ 1.22
CDK5-204ENST00000485972 LIASO43766 372 aa22.67■■□□□ 1.22
CDK5-204ENST00000485972 RDXP35241 583 aaKnown RBP22.67■■□□□ 1.22
CDK5-204ENST00000485972 SLC5A3P53794 718 aa22.67■■□□□ 1.22
CDK5-204ENST00000485972 PITX1P78337 314 aaPredicted RBP22.67■■□□□ 1.22
CDK5-204ENST00000485972 MMRN1Q13201 1228 aa22.67■■□□□ 1.22
CDK5-204ENST00000485972 PPP1R7Q15435 360 aa22.67■■□□□ 1.22
CDK5-204ENST00000485972 OTUD1Q5VV17 481 aaPredicted RBP22.67■■□□□ 1.22
CDK5-204ENST00000485972 BNIPLQ7Z465 357 aa22.67■■□□□ 1.22
CDK5-204ENST00000485972 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP22.67■■□□□ 1.22
CDK5-204ENST00000485972 HAUS1Q96CS2 278 aa22.67■■□□□ 1.22
CDK5-204ENST00000485972 OXCT2Q9BYC2 517 aaPredicted RBP22.67■■□□□ 1.22
CDK5-204ENST00000485972 MICAL3Q7RTP6 2002 aa22.67■■□□□ 1.22
CDK5-204ENST00000485972 SYNJ2BP-COX16A0A087WUM0 186 aa22.66■■□□□ 1.22
CDK5-204ENST00000485972 TBC1D4O60343 1298 aa22.66■■□□□ 1.22
CDK5-204ENST00000485972 SASH3O75995 380 aa22.66■■□□□ 1.22
CDK5-204ENST00000485972 CPB1P15086 417 aa22.66■■□□□ 1.22
CDK5-204ENST00000485972 EN2P19622 333 aaPredicted RBP22.66■■□□□ 1.22
CDK5-204ENST00000485972 DRG2P55039 364 aaKnown RBP22.66■■□□□ 1.22
CDK5-204ENST00000485972 DEUP1Q05D60 604 aa22.66■■□□□ 1.22
CDK5-204ENST00000485972 CA9Q16790 459 aa22.66■■□□□ 1.22
CDK5-204ENST00000485972 BSPRYQ5W0U4 402 aa22.66■■□□□ 1.22
CDK5-204ENST00000485972 RSPO2Q6UXX9 243 aaPredicted RBP22.66■■□□□ 1.22
CDK5-204ENST00000485972 FAM131BQ86XD5 332 aa22.66■■□□□ 1.22
CDK5-204ENST00000485972 CCDC185Q8N715 623 aa22.66■■□□□ 1.22
CDK5-204ENST00000485972 ATAD1Q8NBU5 361 aa22.66■■□□□ 1.22
CDK5-204ENST00000485972 SLC7A14Q8TBB6 771 aa22.66■■□□□ 1.22
CDK5-204ENST00000485972 IGSF21Q96ID5 467 aa22.66■■□□□ 1.22
CDK5-204ENST00000485972 PCDH18Q9HCL0 1135 aa22.66■■□□□ 1.22
CDK5-204ENST00000485972 COX16Q9P0S2 106 aa22.66■■□□□ 1.22
CDK5-204ENST00000485972 TRIM66O15016 1216 aa22.66■■□□□ 1.22
CDK5-204ENST00000485972 BAIAP3O94812 1187 aa22.66■■□□□ 1.22
CDK5-204ENST00000485972 GAS8O95995 478 aa22.66■■□□□ 1.22
CDK5-204ENST00000485972 MAGEA11P43364 429 aa22.66■■□□□ 1.22
CDK5-204ENST00000485972 IFRD2Q12894 506 aaPredicted RBP22.66■■□□□ 1.22
CDK5-204ENST00000485972 NME3Q13232 169 aa22.66■■□□□ 1.22
CDK5-204ENST00000485972 GPR17Q13304 367 aa22.66■■□□□ 1.22
CDK5-204ENST00000485972 BYSLQ13895 437 aaKnown RBP22.66■■□□□ 1.22
CDK5-204ENST00000485972 DDR2Q16832 855 aa22.66■■□□□ 1.22
CDK5-204ENST00000485972 USP41Q3LFD5 358 aa22.66■■□□□ 1.22
CDK5-204ENST00000485972 DRICH1Q6PGQ1 229 aaPredicted RBP22.66■■□□□ 1.22
CDK5-204ENST00000485972 KCNT2Q6UVM3 1135 aa22.66■■□□□ 1.22
CDK5-204ENST00000485972 SYDE1Q6ZW31 735 aaPredicted RBP22.66■■□□□ 1.22
CDK5-204ENST00000485972 SND1Q7KZF4 910 aaKnown RBP eCLIP22.66■■□□□ 1.22
CDK5-204ENST00000485972 TTC13Q8NBP0 860 aa22.66■■□□□ 1.22
CDK5-204ENST00000485972 EDEM1Q92611 657 aa22.66■■□□□ 1.22
CDK5-204ENST00000485972 C8orf48Q96LL4 319 aa22.66■■□□□ 1.22
CDK5-204ENST00000485972 DHX35Q9H5Z1 703 aaKnown RBP22.66■■□□□ 1.22
CDK5-204ENST00000485972 IL23AQ9NPF7 189 aa22.66■■□□□ 1.22
CDK5-204ENST00000485972 RRN3Q9NYV6 651 aa22.66■■□□□ 1.22
CDK5-204ENST00000485972 DNPEPQ9ULA0 475 aa22.66■■□□□ 1.22
CDK5-204ENST00000485972 AP4E1Q9UPM8 1137 aa22.66■■□□□ 1.22
CDK5-204ENST00000485972 SNX24Q9Y343 169 aa22.66■■□□□ 1.22
CDK5-204ENST00000485972 EFEMP2O95967 443 aa22.65■■□□□ 1.22
CDK5-204ENST00000485972 IL4RP24394 825 aa22.65■■□□□ 1.22
CDK5-204ENST00000485972 KRT17Q04695 432 aa22.65■■□□□ 1.22
CDK5-204ENST00000485972 BTG3Q14201 252 aaPredicted RBP22.65■■□□□ 1.22
CDK5-204ENST00000485972 CASP8Q14790 479 aa22.65■■□□□ 1.22
CDK5-204ENST00000485972 PRSS55Q6UWB4 352 aaPredicted RBP22.65■■□□□ 1.22
CDK5-204ENST00000485972 OTOP2Q7RTS6 562 aa22.65■■□□□ 1.22
CDK5-204ENST00000485972 CAVIN3Q969G5 261 aa22.65■■□□□ 1.22
CDK5-204ENST00000485972 RNF157Q96PX1 679 aa22.65■■□□□ 1.22
CDK5-204ENST00000485972 TRIM62Q9BVG3 475 aa22.65■■□□□ 1.22
CDK5-204ENST00000485972 MCOLN1Q9GZU1 580 aa22.65■■□□□ 1.22
CDK5-204ENST00000485972 FNDC1Q4ZHG4 1894 aaPredicted RBP22.64■■□□□ 1.22
CDK5-204ENST00000485972 FAM153BP0C7A2 387 aa22.64■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms