RNA–Protein interactions for RNA: ENST00000485792.1

CUX1-208, Transcript of cut like homeobox 1, humanhuman

TSL 5

Gene CUX1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-208ENST00000485792 SLC38A8A6NNN8 435 aa6.06□□□□□ -1.44
CUX1-208ENST00000485792 A8MXQ7 604 aa6.06□□□□□ -1.44
CUX1-208ENST00000485792 F8VP50 259 aa6.06□□□□□ -1.44
CUX1-208ENST00000485792 PHACTR2O75167 634 aa6.06□□□□□ -1.44
CUX1-208ENST00000485792 OAS1P00973 400 aaKnown RBP6.06□□□□□ -1.44
CUX1-208ENST00000485792 P4HA1P13674 534 aa6.06□□□□□ -1.44
CUX1-208ENST00000485792 PSMC3P17980 439 aa6.06□□□□□ -1.44
CUX1-208ENST00000485792 GABRR2P28476 465 aa6.06□□□□□ -1.44
CUX1-208ENST00000485792 PIK3CAP42336 1068 aa6.06□□□□□ -1.44
CUX1-208ENST00000485792 PPP3CCP48454 512 aa6.06□□□□□ -1.44
CUX1-208ENST00000485792 TNNC1P63316 161 aa6.06□□□□□ -1.44
CUX1-208ENST00000485792 GAS6Q14393 721 aa6.06□□□□□ -1.44
CUX1-208ENST00000485792 MEA1Q16626 185 aa6.06□□□□□ -1.44
CUX1-208ENST00000485792 MGAT5BQ3V5L5 792 aa6.06□□□□□ -1.44
CUX1-208ENST00000485792 CDKAL1Q5VV42 579 aa6.06□□□□□ -1.44
CUX1-208ENST00000485792 ARHGAP17Q68EM7 881 aa6.06□□□□□ -1.44
CUX1-208ENST00000485792 CLEC20AQ6ZU45 233 aa6.06□□□□□ -1.44
CUX1-208ENST00000485792 DENND5BQ6ZUT9 1274 aa6.06□□□□□ -1.44
CUX1-208ENST00000485792 ACOT1Q86TX2 421 aa6.06□□□□□ -1.44
CUX1-208ENST00000485792 ARID3BQ8IVW6 561 aaPredicted RBP6.06□□□□□ -1.44
CUX1-208ENST00000485792 CMTM8Q8IZV2 173 aa6.06□□□□□ -1.44
CUX1-208ENST00000485792 ELMOD1Q8N336 334 aa6.06□□□□□ -1.44
CUX1-208ENST00000485792 FBXL6Q8N531 539 aa6.06□□□□□ -1.44
CUX1-208ENST00000485792 OR6B3Q8NGW1 331 aa6.06□□□□□ -1.44
CUX1-208ENST00000485792 SCAMP5Q8TAC9 235 aa6.06□□□□□ -1.44
CUX1-208ENST00000485792 ZSCAN18Q8TBC5 510 aaPredicted RBP6.06□□□□□ -1.44
CUX1-208ENST00000485792 DEPDC1BQ8WUY9 529 aa6.06□□□□□ -1.44
CUX1-208ENST00000485792 OVCA2Q8WZ82 227 aa6.06□□□□□ -1.44
CUX1-208ENST00000485792 CLDN23Q96B33 292 aa6.06□□□□□ -1.44
CUX1-208ENST00000485792 MCRS1Q96EZ8 462 aa6.06□□□□□ -1.44
CUX1-208ENST00000485792 GBP4Q96PP9 640 aa6.06□□□□□ -1.44
CUX1-208ENST00000485792 MMS19Q96T76 1030 aa6.06□□□□□ -1.44
CUX1-208ENST00000485792 SEPT5Q99719 369 aaPredicted RBP6.06□□□□□ -1.44
CUX1-208ENST00000485792 FAM83CQ9BQN1 747 aa6.06□□□□□ -1.44
CUX1-208ENST00000485792 NT5C1AQ9BXI3 368 aa6.06□□□□□ -1.44
CUX1-208ENST00000485792 SRRTQ9BXP5 876 aaKnown RBP6.06□□□□□ -1.44
CUX1-208ENST00000485792 NUP62CLQ9H1M0 184 aa6.06□□□□□ -1.44
CUX1-208ENST00000485792 SNX25Q9H3E2 840 aa6.06□□□□□ -1.44
CUX1-208ENST00000485792 NMUR1Q9HB89 426 aa6.06□□□□□ -1.44
CUX1-208ENST00000485792 ZFP14Q9HCL3 533 aa6.06□□□□□ -1.44
CUX1-208ENST00000485792 HPS4Q9NQG7 708 aa6.06□□□□□ -1.44
CUX1-208ENST00000485792 CISHQ9NSE2 258 aa6.06□□□□□ -1.44
CUX1-208ENST00000485792 SAMSN1Q9NSI8 373 aaKnown RBP6.06□□□□□ -1.44
CUX1-208ENST00000485792 UXTQ9UBK9 157 aaPredicted RBP6.06□□□□□ -1.44
CUX1-208ENST00000485792 NXF1Q9UBU9 619 aaKnown RBP6.06□□□□□ -1.44
CUX1-208ENST00000485792 HCN2Q9UL51 889 aa6.06□□□□□ -1.44
CUX1-208ENST00000485792 PTPRZ1P23471 2315 aaPredicted RBP6.05□□□□□ -1.44
CUX1-208ENST00000485792 ZFHX2Q9C0A1 2572 aaPredicted RBP6.05□□□□□ -1.44
CUX1-208ENST00000485792 FAM170AA1A519 330 aa6.05□□□□□ -1.44
CUX1-208ENST00000485792 CHADO15335 359 aa6.05□□□□□ -1.44
CUX1-208ENST00000485792 MYL4P12829 197 aa6.05□□□□□ -1.44
CUX1-208ENST00000485792 ZNF18P17022 549 aa6.05□□□□□ -1.44
CUX1-208ENST00000485792 AOC1P19801 751 aa6.05□□□□□ -1.44
CUX1-208ENST00000485792 CD72P21854 359 aa6.05□□□□□ -1.44
CUX1-208ENST00000485792 AVPR2P30518 371 aa6.05□□□□□ -1.44
CUX1-208ENST00000485792 TUBP50607 506 aa6.05□□□□□ -1.44
CUX1-208ENST00000485792 SLC7A9P82251 487 aa6.05□□□□□ -1.44
CUX1-208ENST00000485792 PRKCQQ04759 706 aa6.05□□□□□ -1.44
CUX1-208ENST00000485792 TNK2Q07912 1038 aa6.05□□□□□ -1.44
CUX1-208ENST00000485792 KCNMA1Q12791 1236 aa6.05□□□□□ -1.44
CUX1-208ENST00000485792 CUL2Q13617 745 aa6.05□□□□□ -1.44
CUX1-208ENST00000485792 ZNF77Q15935 545 aa6.05□□□□□ -1.44
CUX1-208ENST00000485792 DCAF17Q5H9S7 520 aaPredicted RBP6.05□□□□□ -1.44
CUX1-208ENST00000485792 OTUD1Q5VV17 481 aaPredicted RBP6.05□□□□□ -1.44
CUX1-208ENST00000485792 E4F1Q66K89 784 aaPredicted RBP6.05□□□□□ -1.44
CUX1-208ENST00000485792 TXNDC8Q6A555 127 aa6.05□□□□□ -1.44
CUX1-208ENST00000485792 TRIM68Q6AZZ1 485 aa6.05□□□□□ -1.44
CUX1-208ENST00000485792 PM20D1Q6GTS8 502 aa6.05□□□□□ -1.44
CUX1-208ENST00000485792 KLHDC10Q6PID8 442 aa6.05□□□□□ -1.44
CUX1-208ENST00000485792 SCD5Q86SK9 330 aa6.05□□□□□ -1.44
CUX1-208ENST00000485792 SPATA2LQ8IUW3 424 aaPredicted RBP6.05□□□□□ -1.44
CUX1-208ENST00000485792 CCDC105Q8IYK2 499 aa6.05□□□□□ -1.44
CUX1-208ENST00000485792 NUP93Q8N1F7 819 aa6.05□□□□□ -1.44
CUX1-208ENST00000485792 SCML4Q8N228 414 aa6.05□□□□□ -1.44
CUX1-208ENST00000485792 KDF1Q8NAX2 398 aaPredicted RBP6.05□□□□□ -1.44
CUX1-208ENST00000485792 ENOX1Q8TC92 643 aaKnown RBP6.05□□□□□ -1.44
CUX1-208ENST00000485792 NDRG1Q92597 394 aaKnown RBP6.05□□□□□ -1.44
CUX1-208ENST00000485792 NELL1Q92832 810 aa6.05□□□□□ -1.44
CUX1-208ENST00000485792 USP13Q92995 863 aaPredicted RBP6.05□□□□□ -1.44
CUX1-208ENST00000485792 MYEOVQ96EZ4 313 aa6.05□□□□□ -1.44
CUX1-208ENST00000485792 CYFIP2Q96F07 1278 aa6.05□□□□□ -1.44
CUX1-208ENST00000485792 SMARCD1Q96GM5 515 aa6.05□□□□□ -1.44
CUX1-208ENST00000485792 CNOT6LQ96LI5 555 aaKnown RBP6.05□□□□□ -1.44
CUX1-208ENST00000485792 DUSP16Q9BY84 665 aa6.05□□□□□ -1.44
CUX1-208ENST00000485792 FOXQ1Q9C009 403 aa6.05□□□□□ -1.44
CUX1-208ENST00000485792 RNF38Q9H0F5 515 aa6.05□□□□□ -1.44
CUX1-208ENST00000485792 THAP9Q9H5L6 903 aa6.05□□□□□ -1.44
CUX1-208ENST00000485792 FBRSL1Q9HCM7 1045 aaKnown RBP6.05□□□□□ -1.44
CUX1-208ENST00000485792 KRT82Q9NSB4 513 aa6.05□□□□□ -1.44
CUX1-208ENST00000485792 KIAA1257Q9ULG3 409 aa6.05□□□□□ -1.44
CUX1-208ENST00000485792 R3HCC1Q9Y3T6 440 aaKnown RBP6.05□□□□□ -1.44
CUX1-208ENST00000485792 PCDHGA11Q9Y5H2 935 aa6.05□□□□□ -1.44
CUX1-208ENST00000485792 ANKRD36A6QL64 1941 aa6.05□□□□□ -1.44
CUX1-208ENST00000485792 A0A0A0MRY4 1105 aa6.04□□□□□ -1.44
CUX1-208ENST00000485792 HEPACAM2A8MVW5 462 aa6.04□□□□□ -1.44
CUX1-208ENST00000485792 O00370 1275 aa6.04□□□□□ -1.44
CUX1-208ENST00000485792 MDM4O15151 490 aa6.04□□□□□ -1.44
CUX1-208ENST00000485792 CYP26A1O43174 497 aa6.04□□□□□ -1.44
CUX1-208ENST00000485792 RTN3O95197 1032 aaPredicted RBP6.04□□□□□ -1.44
CUX1-208ENST00000485792 FGFR1OPO95684 399 aaKnown RBP6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms