RNA–Protein interactions for RNA: ENST00000485705.5

RPUSD3-217, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 3

Gene RPUSD3, Length 630 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-217ENST00000485705 CNGA4Q8IV77 575 aa16.24■□□□□ 0.19
RPUSD3-217ENST00000485705 PLCD3Q8N3E9 789 aa16.24■□□□□ 0.19
RPUSD3-217ENST00000485705 ADAMTS19Q8TE59 1207 aa16.24■□□□□ 0.19
RPUSD3-217ENST00000485705 IRGQQ8WZA9 623 aa16.24■□□□□ 0.19
RPUSD3-217ENST00000485705 EDEM1Q92611 657 aa16.24■□□□□ 0.19
RPUSD3-217ENST00000485705 SMARCD2Q92925 531 aa16.24■□□□□ 0.19
RPUSD3-217ENST00000485705 USP13Q92995 863 aaPredicted RBP16.24■□□□□ 0.19
RPUSD3-217ENST00000485705 C18orf8Q96DM3 657 aa16.24■□□□□ 0.19
RPUSD3-217ENST00000485705 LRRC3BQ96PB8 259 aa16.24■□□□□ 0.19
RPUSD3-217ENST00000485705 KXD1Q9BQD3 176 aa16.24■□□□□ 0.19
RPUSD3-217ENST00000485705 C11orf70Q9BRQ4 267 aa16.24■□□□□ 0.19
RPUSD3-217ENST00000485705 CLIC5Q9NZA1 410 aa16.24■□□□□ 0.19
RPUSD3-217ENST00000485705 BZW2Q9Y6E2 419 aaKnown RBP16.24■□□□□ 0.19
RPUSD3-217ENST00000485705 MYOFQ9NZM1 2061 aa16.23■□□□□ 0.19
RPUSD3-217ENST00000485705 SOBPA7XYQ1 873 aa16.23■□□□□ 0.19
RPUSD3-217ENST00000485705 ANHXE9PGG2 379 aa16.23■□□□□ 0.19
RPUSD3-217ENST00000485705 LTFP02788 710 aa16.23■□□□□ 0.19
RPUSD3-217ENST00000485705 FYNP06241 537 aa16.23■□□□□ 0.19
RPUSD3-217ENST00000485705 CKMP06732 381 aa16.23■□□□□ 0.19
RPUSD3-217ENST00000485705 RALAP11233 206 aa16.23■□□□□ 0.19
RPUSD3-217ENST00000485705 AVPR1AP37288 418 aa16.23■□□□□ 0.19
RPUSD3-217ENST00000485705 EIF4A3P38919 411 aaKnown RBP16.23■□□□□ 0.19
RPUSD3-217ENST00000485705 PSEN1P49768 467 aa16.23■□□□□ 0.19
RPUSD3-217ENST00000485705 TUBP50607 506 aa16.23■□□□□ 0.19
RPUSD3-217ENST00000485705 ZXDBP98169 803 aa16.23■□□□□ 0.19
RPUSD3-217ENST00000485705 BTBD8Q5XKL5 378 aa16.23■□□□□ 0.19
RPUSD3-217ENST00000485705 PHF13Q86YI8 300 aaPredicted RBP16.23■□□□□ 0.19
RPUSD3-217ENST00000485705 ARHGAP18Q8N392 663 aa16.23■□□□□ 0.19
RPUSD3-217ENST00000485705 RIN3Q8TB24 985 aa16.23■□□□□ 0.19
RPUSD3-217ENST00000485705 KHSRPQ92945 711 aaKnown RBP eCLIP16.23■□□□□ 0.19
RPUSD3-217ENST00000485705 FAM149B1Q96BN6 582 aa16.23■□□□□ 0.19
RPUSD3-217ENST00000485705 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.23■□□□□ 0.19
RPUSD3-217ENST00000485705 KCNK12Q9HB15 430 aa16.23■□□□□ 0.19
RPUSD3-217ENST00000485705 SMPD4Q9NXE4 827 aa16.23■□□□□ 0.19
RPUSD3-217ENST00000485705 ADAMTS1Q9UHI8 967 aa16.23■□□□□ 0.19
RPUSD3-217ENST00000485705 NUMBLQ9Y6R0 609 aa16.23■□□□□ 0.19
RPUSD3-217ENST00000485705 A0A087X0T9 212 aa16.22■□□□□ 0.19
RPUSD3-217ENST00000485705 GRAP2O75791 330 aa16.22■□□□□ 0.19
RPUSD3-217ENST00000485705 FAM228BP0C875 321 aa16.22■□□□□ 0.19
RPUSD3-217ENST00000485705 MBL2P11226 248 aaPredicted RBP16.22■□□□□ 0.19
RPUSD3-217ENST00000485705 PFKLP17858 780 aa16.22■□□□□ 0.19
RPUSD3-217ENST00000485705 WEE1P30291 646 aa16.22■□□□□ 0.19
RPUSD3-217ENST00000485705 NSFP46459 744 aaKnown RBP16.22■□□□□ 0.19
RPUSD3-217ENST00000485705 SLC7A9P82251 487 aa16.22■□□□□ 0.19
RPUSD3-217ENST00000485705 SLC6A3Q01959 620 aa16.22■□□□□ 0.19
RPUSD3-217ENST00000485705 TSR1Q2NL82 804 aaKnown RBP16.22■□□□□ 0.19
RPUSD3-217ENST00000485705 C10orf120Q5SQS8 335 aa16.22■□□□□ 0.19
RPUSD3-217ENST00000485705 MON1BQ7L1V2 547 aa16.22■□□□□ 0.19
RPUSD3-217ENST00000485705 GJD3Q8N144 294 aa16.22■□□□□ 0.19
RPUSD3-217ENST00000485705 ZFRQ96KR1 1074 aaKnown RBP16.22■□□□□ 0.19
RPUSD3-217ENST00000485705 TRPV4Q9HBA0 871 aa16.22■□□□□ 0.19
RPUSD3-217ENST00000485705 ZFP14Q9HCL3 533 aa16.22■□□□□ 0.19
RPUSD3-217ENST00000485705 ZNHIT6Q9NWK9 470 aaKnown RBP16.22■□□□□ 0.19
RPUSD3-217ENST00000485705 ADAM22Q9P0K1 906 aa16.22■□□□□ 0.19
RPUSD3-217ENST00000485705 ZMYM5Q9UJ78 669 aa16.22■□□□□ 0.19
RPUSD3-217ENST00000485705 NAALADL1Q9UQQ1 740 aa16.22■□□□□ 0.19
RPUSD3-217ENST00000485705 HEPACAM2A8MVW5 462 aa16.21■□□□□ 0.19
RPUSD3-217ENST00000485705 GOLGA8SH3BPF8 625 aa16.21■□□□□ 0.19
RPUSD3-217ENST00000485705 GJB6O95452 261 aa16.21■□□□□ 0.19
RPUSD3-217ENST00000485705 ATP5C1P36542 298 aaKnown RBP16.21■□□□□ 0.19
RPUSD3-217ENST00000485705 SNX16P57768 344 aa16.21■□□□□ 0.19
RPUSD3-217ENST00000485705 EFEMP1Q12805 493 aa16.21■□□□□ 0.19
RPUSD3-217ENST00000485705 ASTE1Q2TB18 679 aaPredicted RBP16.21■□□□□ 0.19
RPUSD3-217ENST00000485705 SYPL2Q5VXT5 272 aa16.21■□□□□ 0.19
RPUSD3-217ENST00000485705 VITQ6UXI7 678 aa16.21■□□□□ 0.19
RPUSD3-217ENST00000485705 MTSS1LQ765P7 747 aa16.21■□□□□ 0.19
RPUSD3-217ENST00000485705 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.21■□□□□ 0.19
RPUSD3-217ENST00000485705 RNF135Q8IUD6 432 aa16.21■□□□□ 0.19
RPUSD3-217ENST00000485705 MCOLN2Q8IZK6 566 aa16.21■□□□□ 0.19
RPUSD3-217ENST00000485705 ZNF276Q8N554 614 aa16.21■□□□□ 0.19
RPUSD3-217ENST00000485705 MSANTD4Q8NCY6 345 aa16.21■□□□□ 0.19
RPUSD3-217ENST00000485705 TTC16Q8NEE8 873 aa16.21■□□□□ 0.19
RPUSD3-217ENST00000485705 WBP2Q969T9 261 aa16.21■□□□□ 0.19
RPUSD3-217ENST00000485705 ELSPBP1Q96BH3 223 aa16.21■□□□□ 0.19
RPUSD3-217ENST00000485705 UHRF1Q96T88 793 aaPredicted RBP16.21■□□□□ 0.19
RPUSD3-217ENST00000485705 NACA2Q9H009 215 aa16.21■□□□□ 0.19
RPUSD3-217ENST00000485705 GKN1Q9NS71 199 aa16.21■□□□□ 0.19
RPUSD3-217ENST00000485705 ABCC13Q9NSE7 274 aa16.21■□□□□ 0.19
RPUSD3-217ENST00000485705 TDP1Q9NUW8 608 aa16.21■□□□□ 0.19
RPUSD3-217ENST00000485705 DNMT3LQ9UJW3 386 aa16.21■□□□□ 0.19
RPUSD3-217ENST00000485705 ARHGAP26Q9UNA1 814 aa16.21■□□□□ 0.19
RPUSD3-217ENST00000485705 CPQQ9Y646 472 aa16.21■□□□□ 0.19
RPUSD3-217ENST00000485705 KIF26AQ9ULI4 1882 aaPredicted RBP16.2■□□□□ 0.18
RPUSD3-217ENST00000485705 TRIOO75962 3097 aa16.2■□□□□ 0.18
RPUSD3-217ENST00000485705 SART1O43290 800 aaKnown RBP16.2■□□□□ 0.18
RPUSD3-217ENST00000485705 ECI2O75521 394 aa16.2■□□□□ 0.18
RPUSD3-217ENST00000485705 FTLP02792 175 aaPredicted RBP16.2■□□□□ 0.18
RPUSD3-217ENST00000485705 GZMAP12544 262 aa16.2■□□□□ 0.18
RPUSD3-217ENST00000485705 RNASE9P60153 205 aaKnown RBP16.2■□□□□ 0.18
RPUSD3-217ENST00000485705 YWHAZP63104 245 aaKnown RBP16.2■□□□□ 0.18
RPUSD3-217ENST00000485705 GFPT1Q06210 699 aaPredicted RBP16.2■□□□□ 0.18
RPUSD3-217ENST00000485705 MAPK8IP2Q13387 824 aaPredicted RBP16.2■□□□□ 0.18
RPUSD3-217ENST00000485705 GRM2Q14416 872 aa16.2■□□□□ 0.18
RPUSD3-217ENST00000485705 ZNF268Q14587 947 aaPredicted RBP16.2■□□□□ 0.18
RPUSD3-217ENST00000485705 EFHC1Q5JVL4 640 aa16.2■□□□□ 0.18
RPUSD3-217ENST00000485705 FAM102AQ5T9C2 384 aaPredicted RBP16.2■□□□□ 0.18
RPUSD3-217ENST00000485705 TOGARAM2Q6ZUX3 1019 aa16.2■□□□□ 0.18
RPUSD3-217ENST00000485705 RSRC2Q7L4I2 434 aaKnown RBP16.2■□□□□ 0.18
RPUSD3-217ENST00000485705 SLC26A9Q7LBE3 791 aa16.2■□□□□ 0.18
RPUSD3-217ENST00000485705 MIB1Q86YT6 1006 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms