RNA–Protein interactions for RNA: ENST00000485627.1

CTSA-208, Transcript of cathepsin A, humanhuman

TSL 3

Gene CTSA, Length 695 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-208ENST00000485627 NCAM1P13591 858 aa9.95□□□□□ -0.82
CTSA-208ENST00000485627 TCF4P15884 667 aa9.95□□□□□ -0.82
CTSA-208ENST00000485627 CHRNA3P32297 505 aa9.95□□□□□ -0.82
CTSA-208ENST00000485627 GLUD2P49448 558 aa9.95□□□□□ -0.82
CTSA-208ENST00000485627 SLC5A3P53794 718 aa9.95□□□□□ -0.82
CTSA-208ENST00000485627 KRT17Q04695 432 aa9.95□□□□□ -0.82
CTSA-208ENST00000485627 DEUP1Q05D60 604 aa9.95□□□□□ -0.82
CTSA-208ENST00000485627 IFRD2Q12894 506 aaPredicted RBP9.95□□□□□ -0.82
CTSA-208ENST00000485627 GPR17Q13304 367 aa9.95□□□□□ -0.82
CTSA-208ENST00000485627 BRD3Q15059 726 aa9.95□□□□□ -0.82
CTSA-208ENST00000485627 LLGL1Q15334 1064 aa9.95□□□□□ -0.82
CTSA-208ENST00000485627 SLC25A52Q3SY17 297 aa9.95□□□□□ -0.82
CTSA-208ENST00000485627 MGAT5BQ3V5L5 792 aa9.95□□□□□ -0.82
CTSA-208ENST00000485627 MAP9Q49MG5 647 aa9.95□□□□□ -0.82
CTSA-208ENST00000485627 TJAP1Q5JTD0 557 aa9.95□□□□□ -0.82
CTSA-208ENST00000485627 RTP2Q5QGT7 225 aa9.95□□□□□ -0.82
CTSA-208ENST00000485627 MFSD7Q6UXD7 560 aa9.95□□□□□ -0.82
CTSA-208ENST00000485627 SPOCD1Q6ZMY3 1216 aa9.95□□□□□ -0.82
CTSA-208ENST00000485627 SND1Q7KZF4 910 aaKnown RBP eCLIP9.95□□□□□ -0.821e-7■■■□□ 15
CTSA-208ENST00000485627 STRADAQ7RTN6 431 aa9.95□□□□□ -0.82
CTSA-208ENST00000485627 TAS1R1Q7RTX1 841 aa9.95□□□□□ -0.82
CTSA-208ENST00000485627 GPRIN1Q7Z2K8 1008 aa9.95□□□□□ -0.82
CTSA-208ENST00000485627 TMCO2Q7Z6W1 182 aaPredicted RBP9.95□□□□□ -0.82
CTSA-208ENST00000485627 TMEM173Q86WV6 379 aaPredicted RBP9.95□□□□□ -0.82
CTSA-208ENST00000485627 CCDC105Q8IYK2 499 aa9.95□□□□□ -0.82
CTSA-208ENST00000485627 SLC39A11Q8N1S5 342 aa9.95□□□□□ -0.82
CTSA-208ENST00000485627 SCML4Q8N228 414 aa9.95□□□□□ -0.82
CTSA-208ENST00000485627 ARFGAP1Q8N6T3 406 aa9.95□□□□□ -0.82
CTSA-208ENST00000485627 BCL7CQ8WUZ0 217 aaPredicted RBP9.95□□□□□ -0.82
CTSA-208ENST00000485627 TEKT4Q8WW24 435 aa9.95□□□□□ -0.82
CTSA-208ENST00000485627 PIK3R5Q8WYR1 880 aa9.95□□□□□ -0.82
CTSA-208ENST00000485627 ANKRD7Q92527 254 aa9.95□□□□□ -0.82
CTSA-208ENST00000485627 RAPGEF5Q92565 580 aa9.95□□□□□ -0.82
CTSA-208ENST00000485627 NDRG1Q92597 394 aaKnown RBP9.95□□□□□ -0.82
CTSA-208ENST00000485627 KHSRPQ92945 711 aaKnown RBP eCLIP9.95□□□□□ -0.82
CTSA-208ENST00000485627 C8orf48Q96LL4 319 aa9.95□□□□□ -0.82
CTSA-208ENST00000485627 PGLYRP2Q96PD5 576 aa9.95□□□□□ -0.82
CTSA-208ENST00000485627 SLITRK1Q96PX8 696 aa9.95□□□□□ -0.82
CTSA-208ENST00000485627 SEPT5Q99719 369 aaPredicted RBP9.95□□□□□ -0.82
CTSA-208ENST00000485627 HEMGNQ9BXL5 484 aa9.95□□□□□ -0.82
CTSA-208ENST00000485627 EPC1Q9H2F5 836 aa9.95□□□□□ -0.82
CTSA-208ENST00000485627 FBXO44Q9H4M3 255 aa9.95□□□□□ -0.82
CTSA-208ENST00000485627 STIM2Q9P246 746 aa9.95□□□□□ -0.82
CTSA-208ENST00000485627 FEZ2Q9UHY8 353 aaPredicted RBP9.95□□□□□ -0.82
CTSA-208ENST00000485627 INSL6Q9Y581 213 aa9.95□□□□□ -0.82
CTSA-208ENST00000485627 BACE2Q9Y5Z0 518 aa9.95□□□□□ -0.82
CTSA-208ENST00000485627 CDY1Q9Y6F8 540 aa9.95□□□□□ -0.82
CTSA-208ENST00000485627 MRPL42Q9Y6G3 142 aaKnown RBP9.95□□□□□ -0.82
CTSA-208ENST00000485627 SLC4A7Q9Y6M7 1214 aa9.95□□□□□ -0.82
CTSA-208ENST00000485627 SYNJ2BP-COX16A0A087WUM0 186 aa9.94□□□□□ -0.82
CTSA-208ENST00000485627 MTMR11A4FU01 709 aa9.94□□□□□ -0.82
CTSA-208ENST00000485627 C19orf67A6NJJ6 358 aa9.94□□□□□ -0.82
CTSA-208ENST00000485627 YJEFN3A6XGL0 299 aa9.94□□□□□ -0.82
CTSA-208ENST00000485627 E7ENQ6 273 aa9.94□□□□□ -0.82
CTSA-208ENST00000485627 M0QYT0 321 aa9.94□□□□□ -0.82
CTSA-208ENST00000485627 C2CD2LO14523 706 aa9.94□□□□□ -0.82
CTSA-208ENST00000485627 TBC1D4O60343 1298 aa9.94□□□□□ -0.82
CTSA-208ENST00000485627 HEXIM1O94992 359 aaKnown RBP9.94□□□□□ -0.82
CTSA-208ENST00000485627 RTN3O95197 1032 aaPredicted RBP9.94□□□□□ -0.82
CTSA-208ENST00000485627 GJB5O95377 273 aa9.94□□□□□ -0.82
CTSA-208ENST00000485627 F9P00740 461 aa9.94□□□□□ -0.82
CTSA-208ENST00000485627 URODP06132 367 aa9.94□□□□□ -0.82
CTSA-208ENST00000485627 RARAP10276 462 aa9.94□□□□□ -0.82
CTSA-208ENST00000485627 KDELR1P24390 212 aa9.94□□□□□ -0.82
CTSA-208ENST00000485627 IL1R2P27930 398 aa9.94□□□□□ -0.82
CTSA-208ENST00000485627 GBP1P32455 592 aa9.94□□□□□ -0.82
CTSA-208ENST00000485627 PTPN7P35236 360 aa9.94□□□□□ -0.82
CTSA-208ENST00000485627 RDXP35241 583 aaKnown RBP9.94□□□□□ -0.82
CTSA-208ENST00000485627 FNTAP49354 379 aa9.94□□□□□ -0.82
CTSA-208ENST00000485627 CDH6P55285 790 aa9.94□□□□□ -0.82
CTSA-208ENST00000485627 RPL10AP62906 217 aaKnown RBP9.94□□□□□ -0.82
CTSA-208ENST00000485627 DR1Q01658 176 aa9.94□□□□□ -0.82
CTSA-208ENST00000485627 DHX34Q14147 1143 aaKnown RBP9.94□□□□□ -0.82
CTSA-208ENST00000485627 PDK2Q15119 407 aa9.94□□□□□ -0.82
CTSA-208ENST00000485627 TFDP3Q5H9I0 405 aa9.94□□□□□ -0.82
CTSA-208ENST00000485627 KCNT1Q5JUK3 1230 aa9.94□□□□□ -0.82
CTSA-208ENST00000485627 TMEM240Q5SV17 173 aa9.94□□□□□ -0.82
CTSA-208ENST00000485627 ERMARDQ5T6L9 678 aa9.94□□□□□ -0.82
CTSA-208ENST00000485627 SH3PXD2AQ5TCZ1 1133 aa9.94□□□□□ -0.82
CTSA-208ENST00000485627 BTBD8Q5XKL5 378 aa9.94□□□□□ -0.82
CTSA-208ENST00000485627 TXNRD3NBQ6F5E7 133 aa9.94□□□□□ -0.82
CTSA-208ENST00000485627 PM20D1Q6GTS8 502 aa9.94□□□□□ -0.82
CTSA-208ENST00000485627 TRNP1Q6NT89 227 aa9.94□□□□□ -0.82
CTSA-208ENST00000485627 PRSS55Q6UWB4 352 aaPredicted RBP9.94□□□□□ -0.82
CTSA-208ENST00000485627 RFX6Q8HWS3 928 aa9.94□□□□□ -0.82
CTSA-208ENST00000485627 IFT20Q8IY31 132 aa9.94□□□□□ -0.82
CTSA-208ENST00000485627 NUP93Q8N1F7 819 aa9.94□□□□□ -0.82
CTSA-208ENST00000485627 ARHGAP18Q8N392 663 aa9.94□□□□□ -0.82
CTSA-208ENST00000485627 ATAD1Q8NBU5 361 aa9.94□□□□□ -0.82
CTSA-208ENST00000485627 SLC7A14Q8TBB6 771 aa9.94□□□□□ -0.82
CTSA-208ENST00000485627 TRAF3IP1Q8TDR0 691 aaPredicted RBP9.94□□□□□ -0.82
CTSA-208ENST00000485627 GRK7Q8WTQ7 553 aa9.94□□□□□ -0.82
CTSA-208ENST00000485627 CENPIQ92674 756 aaPredicted RBP9.94□□□□□ -0.82
CTSA-208ENST00000485627 ACSF2Q96CM8 615 aaPredicted RBP9.94□□□□□ -0.82
CTSA-208ENST00000485627 FAM122AQ96E09 287 aa9.94□□□□□ -0.82
CTSA-208ENST00000485627 NECAB3Q96P71 396 aaPredicted RBP9.94□□□□□ -0.82
CTSA-208ENST00000485627 SLC2A13Q96QE2 648 aa9.94□□□□□ -0.82
CTSA-208ENST00000485627 SLC9A7Q96T83 725 aa9.94□□□□□ -0.82
CTSA-208ENST00000485627 HERC2P3Q9BVR0 1158 aa9.94□□□□□ -0.82
CTSA-208ENST00000485627 CALN1Q9BXU9 219 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms