RNA–Protein interactions for RNA: ENST00000485618.1

SF3A1-208, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 593 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-208ENST00000485618 PMF1Q6P1K2 205 aa8.67□□□□□ -1.02
SF3A1-208ENST00000485618 C1orf228Q6PIY5 440 aa8.67□□□□□ -1.02
SF3A1-208ENST00000485618 TMC6Q7Z403 805 aa8.67□□□□□ -1.02
SF3A1-208ENST00000485618 IRF2BP2Q7Z5L9 587 aa8.67□□□□□ -1.02
SF3A1-208ENST00000485618 NOP9Q86U38 636 aaKnown RBP8.67□□□□□ -1.02
SF3A1-208ENST00000485618 PASD1Q8IV76 773 aa8.67□□□□□ -1.02
SF3A1-208ENST00000485618 SCUBE3Q8IX30 993 aa8.67□□□□□ -1.02
SF3A1-208ENST00000485618 BAP1Q92560 729 aa8.67□□□□□ -1.02
SF3A1-208ENST00000485618 IRF7Q92985 503 aa8.67□□□□□ -1.02
SF3A1-208ENST00000485618 FAM149B1Q96BN6 582 aa8.67□□□□□ -1.02
SF3A1-208ENST00000485618 TCEAL4Q96EI5 215 aa8.67□□□□□ -1.02
SF3A1-208ENST00000485618 VCPIP1Q96JH7 1222 aa8.67□□□□□ -1.02
SF3A1-208ENST00000485618 ASB16Q96NS5 453 aa8.67□□□□□ -1.02
SF3A1-208ENST00000485618 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP8.67□□□□□ -1.02
SF3A1-208ENST00000485618 TRMT61BQ9BVS5 477 aaKnown RBP8.67□□□□□ -1.02
SF3A1-208ENST00000485618 SLC4A5Q9BY07 1137 aa8.67□□□□□ -1.02
SF3A1-208ENST00000485618 SLC46A2Q9BY10 475 aa8.67□□□□□ -1.02
SF3A1-208ENST00000485618 ULBP1Q9BZM6 244 aa8.67□□□□□ -1.02
SF3A1-208ENST00000485618 DCLK3Q9C098 648 aa8.67□□□□□ -1.02
SF3A1-208ENST00000485618 MFSD1Q9H3U5 465 aa8.67□□□□□ -1.02
SF3A1-208ENST00000485618 SMOC2Q9H3U7 446 aa8.67□□□□□ -1.02
SF3A1-208ENST00000485618 KCNK12Q9HB15 430 aa8.67□□□□□ -1.02
SF3A1-208ENST00000485618 ZNF334Q9HCZ1 680 aaPredicted RBP8.67□□□□□ -1.02
SF3A1-208ENST00000485618 LUC7LQ9NQ29 371 aaKnown RBP8.67□□□□□ -1.02
SF3A1-208ENST00000485618 ASNSD1Q9NWL6 643 aa8.67□□□□□ -1.02
SF3A1-208ENST00000485618 GMIPQ9P107 970 aa8.67□□□□□ -1.02
SF3A1-208ENST00000485618 IMPACTQ9P2X3 320 aa8.67□□□□□ -1.02
SF3A1-208ENST00000485618 SLC12A6Q9UHW9 1150 aa8.67□□□□□ -1.02
SF3A1-208ENST00000485618 NOCTQ9UK39 431 aaKnown RBP8.67□□□□□ -1.02
SF3A1-208ENST00000485618 AJAP1Q9UKB5 411 aaPredicted RBP8.67□□□□□ -1.02
SF3A1-208ENST00000485618 ARHGAP26Q9UNA1 814 aa8.67□□□□□ -1.02
SF3A1-208ENST00000485618 ZNF510Q9Y2H8 683 aa8.67□□□□□ -1.02
SF3A1-208ENST00000485618 PAXBP1Q9Y5B6 917 aa8.67□□□□□ -1.02
SF3A1-208ENST00000485618 CFAP54Q96N23 3096 aa8.67□□□□□ -1.02
SF3A1-208ENST00000485618 A0A1W2PQH9 124 aa8.66□□□□□ -1.02
SF3A1-208ENST00000485618 ZNF263O14978 683 aa8.66□□□□□ -1.02
SF3A1-208ENST00000485618 IPO7O95373 1038 aaKnown RBP8.66□□□□□ -1.02
SF3A1-208ENST00000485618 F9P00740 461 aa8.66□□□□□ -1.02
SF3A1-208ENST00000485618 MMEP08473 750 aa8.66□□□□□ -1.02
SF3A1-208ENST00000485618 PNMA6AP0CW24 399 aaPredicted RBP8.66□□□□□ -1.02
SF3A1-208ENST00000485618 MYBL1P10243 752 aa8.66□□□□□ -1.02
SF3A1-208ENST00000485618 SLC2A3P11169 496 aa8.66□□□□□ -1.02
SF3A1-208ENST00000485618 MBL2P11226 248 aaPredicted RBP8.66□□□□□ -1.02
SF3A1-208ENST00000485618 GZMAP12544 262 aa8.66□□□□□ -1.02
SF3A1-208ENST00000485618 TCF3P15923 654 aa8.66□□□□□ -1.02
SF3A1-208ENST00000485618 GJA1P17302 382 aa8.66□□□□□ -1.02
SF3A1-208ENST00000485618 PSMC3P17980 439 aa8.66□□□□□ -1.02
SF3A1-208ENST00000485618 CASP14P31944 242 aa8.66□□□□□ -1.02
SF3A1-208ENST00000485618 GBP1P32455 592 aa8.66□□□□□ -1.02
SF3A1-208ENST00000485618 SCNN1AP37088 669 aa8.66□□□□□ -1.02
SF3A1-208ENST00000485618 CCR2P41597 374 aa8.66□□□□□ -1.02
SF3A1-208ENST00000485618 HARS2P49590 506 aaKnown RBP8.66□□□□□ -1.02
SF3A1-208ENST00000485618 ZNF75DP51815 510 aa8.66□□□□□ -1.02
SF3A1-208ENST00000485618 CYP4F8P98187 520 aa8.66□□□□□ -1.02
SF3A1-208ENST00000485618 CDK17Q00537 523 aa8.66□□□□□ -1.02
SF3A1-208ENST00000485618 SLC6A3Q01959 620 aa8.66□□□□□ -1.02
SF3A1-208ENST00000485618 C1QBPQ07021 282 aaKnown RBP8.66□□□□□ -1.02
SF3A1-208ENST00000485618 PDGFRLQ15198 375 aa8.66□□□□□ -1.02
SF3A1-208ENST00000485618 ARHGAP29Q52LW3 1261 aa8.66□□□□□ -1.02
SF3A1-208ENST00000485618 BSPRYQ5W0U4 402 aa8.66□□□□□ -1.02
SF3A1-208ENST00000485618 OR6B2Q6IFH4 312 aa8.66□□□□□ -1.02
SF3A1-208ENST00000485618 SND1Q7KZF4 910 aaKnown RBP eCLIP8.66□□□□□ -1.02
SF3A1-208ENST00000485618 ARHGAP30Q7Z6I6 1101 aaPredicted RBP8.66□□□□□ -1.02
SF3A1-208ENST00000485618 GAS2L3Q86XJ1 694 aa8.66□□□□□ -1.02
SF3A1-208ENST00000485618 MFSD6LQ8IWD5 586 aa8.66□□□□□ -1.02
SF3A1-208ENST00000485618 ARL14EPQ8N8R7 260 aaPredicted RBP8.66□□□□□ -1.02
SF3A1-208ENST00000485618 TMEM105Q8N8V8 129 aa8.66□□□□□ -1.02
SF3A1-208ENST00000485618 BPIFB1Q8TDL5 484 aa8.66□□□□□ -1.02
SF3A1-208ENST00000485618 CSGALNACT1Q8TDX6 532 aa8.66□□□□□ -1.02
SF3A1-208ENST00000485618 CPA5Q8WXQ8 436 aa8.66□□□□□ -1.02
SF3A1-208ENST00000485618 DDX1Q92499 740 aaKnown RBP8.66□□□□□ -1.02
SF3A1-208ENST00000485618 SHDQ96IW2 340 aa8.66□□□□□ -1.02
SF3A1-208ENST00000485618 CCDC42Q96M95 316 aa8.66□□□□□ -1.02
SF3A1-208ENST00000485618 TTYH3Q9C0H2 523 aa8.66□□□□□ -1.02
SF3A1-208ENST00000485618 HAUS4Q9H6D7 363 aa8.66□□□□□ -1.02
SF3A1-208ENST00000485618 POPDC2Q9HBU9 364 aa8.66□□□□□ -1.02
SF3A1-208ENST00000485618 ACP6Q9NPH0 428 aa8.66□□□□□ -1.02
SF3A1-208ENST00000485618 TMEM30AQ9NV96 361 aa8.66□□□□□ -1.02
SF3A1-208ENST00000485618 ADAM22Q9P0K1 906 aa8.66□□□□□ -1.02
SF3A1-208ENST00000485618 MARCH2Q9P0N8 246 aa8.66□□□□□ -1.02
SF3A1-208ENST00000485618 TBC1D14Q9P2M4 693 aa8.66□□□□□ -1.02
SF3A1-208ENST00000485618 SH3BP1Q9Y3L3 701 aa8.66□□□□□ -1.02
SF3A1-208ENST00000485618 PTPRDP23468 1912 aa8.65□□□□□ -1.02
SF3A1-208ENST00000485618 E2F8A0AVK6 867 aa8.65□□□□□ -1.02
SF3A1-208ENST00000485618 HEPACAM2A8MVW5 462 aa8.65□□□□□ -1.02
SF3A1-208ENST00000485618 E5RJQ4 531 aa8.65□□□□□ -1.02
SF3A1-208ENST00000485618 TULP2O00295 520 aa8.65□□□□□ -1.02
SF3A1-208ENST00000485618 AKR1B10O60218 316 aa8.65□□□□□ -1.02
SF3A1-208ENST00000485618 RTN2O75298 545 aa8.65□□□□□ -1.02
SF3A1-208ENST00000485618 MOSPD3O75425 235 aa8.65□□□□□ -1.02
SF3A1-208ENST00000485618 OAS1P00973 400 aaKnown RBP8.65□□□□□ -1.02
SF3A1-208ENST00000485618 LTFP02788 710 aa8.65□□□□□ -1.02
SF3A1-208ENST00000485618 CYP1A1P04798 512 aaPredicted RBP8.65□□□□□ -1.02
SF3A1-208ENST00000485618 GYPCP04921 128 aa8.65□□□□□ -1.02
SF3A1-208ENST00000485618 SRFP11831 508 aa8.65□□□□□ -1.02
SF3A1-208ENST00000485618 NCAM1P13591 858 aa8.65□□□□□ -1.02
SF3A1-208ENST00000485618 GLULP15104 373 aa8.65□□□□□ -1.02
SF3A1-208ENST00000485618 MMP8P22894 467 aa8.65□□□□□ -1.02
SF3A1-208ENST00000485618 CDC25BP30305 580 aa8.65□□□□□ -1.02
SF3A1-208ENST00000485618 HNRNPH3P31942 346 aaKnown RBP8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms