RNA–Protein interactions for RNA: ENST00000485567.1

FN1-222, Transcript of fibronectin 1, human

TSL 1 (best)

Gene FN1, Length 584 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FN1-222	ENST00000485567	MAEL	Q96JY0	434 aa	Known RBP	4.66	□□□□□ -1.66
FN1-222	ENST00000485567	BRD8	Q9H0E9	1235 aa		4.66	□□□□□ -1.66
FN1-222	ENST00000485567	ELAC1	Q9H777	363 aa	Known RBP	4.66	□□□□□ -1.66
FN1-222	ENST00000485567	TBCCD1	Q9NVR7	557 aa		4.66	□□□□□ -1.66
FN1-222	ENST00000485567	GGA3	Q9NZ52	723 aa		4.66	□□□□□ -1.66
FN1-222	ENST00000485567	FZD1	Q9UP38	647 aa		4.66	□□□□□ -1.66
FN1-222	ENST00000485567		A0A0G2JLL6	359 aa	Predicted RBP	4.65	□□□□□ -1.67
FN1-222	ENST00000485567		E7EVH7	732 aa		4.65	□□□□□ -1.67
FN1-222	ENST00000485567		K7ESM1	405 aa		4.65	□□□□□ -1.67
FN1-222	ENST00000485567	PSMD9	O00233	223 aa		4.65	□□□□□ -1.67
FN1-222	ENST00000485567	CTIF	O43310	598 aa	Known RBP	4.65	□□□□□ -1.67
FN1-222	ENST00000485567	LPXN	O60711	386 aa		4.65	□□□□□ -1.67
FN1-222	ENST00000485567	PPP6R2	O75170	966 aa		4.65	□□□□□ -1.67
FN1-222	ENST00000485567	RPP40	O75818	363 aa	Known RBP	4.65	□□□□□ -1.67
FN1-222	ENST00000485567	CER1	O95813	267 aa		4.65	□□□□□ -1.67
FN1-222	ENST00000485567	LMNA	P02545	664 aa	Known RBP	4.65	□□□□□ -1.67
FN1-222	ENST00000485567	XBP1	P17861	261 aa		4.65	□□□□□ -1.67
FN1-222	ENST00000485567	AKT1	P31749	480 aa		4.65	□□□□□ -1.67
FN1-222	ENST00000485567	GSTM5	P46439	218 aa		4.65	□□□□□ -1.67
FN1-222	ENST00000485567	G3BP1	Q13283	466 aa	Known RBP eCLIP	4.65	□□□□□ -1.67
FN1-222	ENST00000485567	KCNJ12	Q14500	433 aa		4.65	□□□□□ -1.67
FN1-222	ENST00000485567	PTPRR	Q15256	657 aa		4.65	□□□□□ -1.67
FN1-222	ENST00000485567	TBRG1	Q3YBR2	411 aa		4.65	□□□□□ -1.67
FN1-222	ENST00000485567	TIGD2	Q4W5G0	525 aa		4.65	□□□□□ -1.67
FN1-222	ENST00000485567	TMEM196	Q5HYL7	178 aa		4.65	□□□□□ -1.67
FN1-222	ENST00000485567	ZNF618	Q5T7W0	954 aa		4.65	□□□□□ -1.67
FN1-222	ENST00000485567	ERICH6B	Q5W0A0	696 aa		4.65	□□□□□ -1.67
FN1-222	ENST00000485567	FAM90A2P	Q658T7	463 aa		4.65	□□□□□ -1.67
FN1-222	ENST00000485567	PIK3AP1	Q6ZUJ8	805 aa		4.65	□□□□□ -1.67
FN1-222	ENST00000485567	GPR149	Q86SP6	731 aa		4.65	□□□□□ -1.67
FN1-222	ENST00000485567	CAND1	Q86VP6	1230 aa	Known RBP	4.65	□□□□□ -1.67
FN1-222	ENST00000485567	TMTC1	Q8IUR5	882 aa		4.65	□□□□□ -1.67
FN1-222	ENST00000485567	C1orf210	Q8IVY1	113 aa		4.65	□□□□□ -1.67
FN1-222	ENST00000485567	LRRC71	Q8N4P6	559 aa		4.65	□□□□□ -1.67
FN1-222	ENST00000485567	TMEM57	Q8N5G2	664 aa		4.65	□□□□□ -1.67
FN1-222	ENST00000485567	METTL25	Q8N6Q8	603 aa		4.65	□□□□□ -1.67
FN1-222	ENST00000485567	C11orf44	Q8N8P7	122 aa		4.65	□□□□□ -1.67
FN1-222	ENST00000485567	SUPT20H	Q8NEM7	779 aa		4.65	□□□□□ -1.67
FN1-222	ENST00000485567	SSH3	Q8TE77	659 aa		4.65	□□□□□ -1.67
FN1-222	ENST00000485567	FKBP10	Q96AY3	582 aa		4.65	□□□□□ -1.67
FN1-222	ENST00000485567	LENG9	Q96B70	501 aa		4.65	□□□□□ -1.67
FN1-222	ENST00000485567	SKA1	Q96BD8	255 aa		4.65	□□□□□ -1.67
FN1-222	ENST00000485567	C3orf49	Q96BT1	292 aa		4.65	□□□□□ -1.67
FN1-222	ENST00000485567	CDK5RAP1	Q96SZ6	601 aa	Known RBP	4.65	□□□□□ -1.67
FN1-222	ENST00000485567	SEC62	Q99442	399 aa	Known RBP	4.65	□□□□□ -1.67
FN1-222	ENST00000485567	BDH2	Q9BUT1	245 aa		4.65	□□□□□ -1.67
FN1-222	ENST00000485567	ALG8	Q9BVK2	526 aa		4.65	□□□□□ -1.67
FN1-222	ENST00000485567	ZHX3	Q9H4I2	956 aa		4.65	□□□□□ -1.67
FN1-222	ENST00000485567	KLC4	Q9NSK0	619 aa		4.65	□□□□□ -1.67
FN1-222	ENST00000485567	TMLHE	Q9NVH6	421 aa		4.65	□□□□□ -1.67
FN1-222	ENST00000485567	IFT80	Q9P2H3	777 aa	Predicted RBP	4.65	□□□□□ -1.67
FN1-222	ENST00000485567	PI4KB	Q9UBF8	816 aa		4.65	□□□□□ -1.67
FN1-222	ENST00000485567	RAPGEFL1	Q9UHV5	662 aa		4.65	□□□□□ -1.67
FN1-222	ENST00000485567	FER1L4	A9Z1Z3	1794 aa		4.64	□□□□□ -1.67
FN1-222	ENST00000485567	CCDC196	A0A1B0GTZ2	297 aa		4.64	□□□□□ -1.67
FN1-222	ENST00000485567	POLB	P06746	335 aa		4.64	□□□□□ -1.67
FN1-222	ENST00000485567	PDHA1	P08559	390 aa		4.64	□□□□□ -1.67
FN1-222	ENST00000485567	CNP	P09543	421 aa	Known RBP	4.64	□□□□□ -1.67
FN1-222	ENST00000485567	TMEM225B	P0DP42	221 aa		4.64	□□□□□ -1.67
FN1-222	ENST00000485567	EGR2	P11161	476 aa	Predicted RBP	4.64	□□□□□ -1.67
FN1-222	ENST00000485567	MMP8	P22894	467 aa		4.64	□□□□□ -1.67
FN1-222	ENST00000485567	CNTF	P26441	200 aa		4.64	□□□□□ -1.67
FN1-222	ENST00000485567	SERPINA4	P29622	427 aa		4.64	□□□□□ -1.67
FN1-222	ENST00000485567	LIPA	P38571	399 aa		4.64	□□□□□ -1.67
FN1-222	ENST00000485567	PBX1	P40424	430 aa		4.64	□□□□□ -1.67
FN1-222	ENST00000485567	EIF4A1	P60842	406 aa	Known RBP	4.64	□□□□□ -1.67
FN1-222	ENST00000485567	PLP2	Q04941	152 aa		4.64	□□□□□ -1.67
FN1-222	ENST00000485567	UBE3A	Q05086	875 aa		4.64	□□□□□ -1.67
FN1-222	ENST00000485567	TRPC3	Q13507	836 aa		4.64	□□□□□ -1.67
FN1-222	ENST00000485567	SIM2	Q14190	667 aa	Predicted RBP	4.64	□□□□□ -1.67
FN1-222	ENST00000485567	NFIX	Q14938	502 aa		4.64	□□□□□ -1.67
FN1-222	ENST00000485567	RPS6KA2	Q15349	733 aa		4.64	□□□□□ -1.67
FN1-222	ENST00000485567	SF3B3	Q15393	1217 aa	Known RBP	4.64	□□□□□ -1.67
FN1-222	ENST00000485567	TBCC	Q15814	346 aa		4.64	□□□□□ -1.67
FN1-222	ENST00000485567	ZNF569	Q5MCW4	686 aa		4.64	□□□□□ -1.67
FN1-222	ENST00000485567	CLEC4G	Q6UXB4	293 aa		4.64	□□□□□ -1.67
FN1-222	ENST00000485567	BBS12	Q6ZW61	710 aa		4.64	□□□□□ -1.67
FN1-222	ENST00000485567	RHOU	Q7L0Q8	258 aa		4.64	□□□□□ -1.67
FN1-222	ENST00000485567	RRAGA	Q7L523	313 aa		4.64	□□□□□ -1.67
FN1-222	ENST00000485567	MAVS	Q7Z434	540 aa		4.64	□□□□□ -1.67
FN1-222	ENST00000485567	PCGF5	Q86SE9	256 aa		4.64	□□□□□ -1.67
FN1-222	ENST00000485567	USP38	Q8NB14	1042 aa		4.64	□□□□□ -1.67
FN1-222	ENST00000485567	CSGALNACT1	Q8TDX6	532 aa		4.64	□□□□□ -1.67
FN1-222	ENST00000485567	EXTL1	Q92935	676 aa		4.64	□□□□□ -1.67
FN1-222	ENST00000485567	DVL3	Q92997	716 aa	Predicted RBP	4.64	□□□□□ -1.67
FN1-222	ENST00000485567	CTHRC1	Q96CG8	243 aa		4.64	□□□□□ -1.67
FN1-222	ENST00000485567	COG8	Q96MW5	612 aa		4.64	□□□□□ -1.67
FN1-222	ENST00000485567	SERHL2	Q9H4I8	314 aa		4.64	□□□□□ -1.67
FN1-222	ENST00000485567	NOD2	Q9HC29	1040 aa		4.64	□□□□□ -1.67
FN1-222	ENST00000485567	LIN7C	Q9NUP9	197 aa	Known RBP	4.64	□□□□□ -1.67
FN1-222	ENST00000485567	TMEM160	Q9NX00	188 aa		4.64	□□□□□ -1.67
FN1-222	ENST00000485567	KCTD5	Q9NXV2	234 aa		4.64	□□□□□ -1.67
FN1-222	ENST00000485567	GABRQ	Q9UN88	632 aa		4.64	□□□□□ -1.67
FN1-222	ENST00000485567	ZBTB1	Q9Y2K1	713 aa		4.64	□□□□□ -1.67
FN1-222	ENST00000485567	DERA	Q9Y315	318 aa		4.64	□□□□□ -1.67
FN1-222	ENST00000485567	ADGRA2	Q96PE1	1338 aa		4.64	□□□□□ -1.67
FN1-222	ENST00000485567	CENPVL1	A0A0U1RR11	272 aa		4.63	□□□□□ -1.67
FN1-222	ENST00000485567	PIPSL	A2A3N6	862 aa		4.63	□□□□□ -1.67
FN1-222	ENST00000485567	WDR27	A2RRH5	827 aa		4.63	□□□□□ -1.67
FN1-222	ENST00000485567	TISP43	B9A030	160 aa		4.63	□□□□□ -1.67

Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms