RNA–Protein interactions for RNA: ENST00000485247.1

PTPN4-210, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-210ENST00000485247 FRMD1Q8N878 549 aa5.85□□□□□ -1.47
PTPN4-210ENST00000485247 FANCBQ8NB91 859 aa5.85□□□□□ -1.47
PTPN4-210ENST00000485247 DAGLBQ8NCG7 672 aa5.85□□□□□ -1.47
PTPN4-210ENST00000485247 FAM168AQ92567 244 aa5.85□□□□□ -1.47
PTPN4-210ENST00000485247 CEP170P1Q96L14 293 aa5.85□□□□□ -1.47
PTPN4-210ENST00000485247 Q96M66 194 aa5.85□□□□□ -1.47
PTPN4-210ENST00000485247 FNBP1Q96RU3 617 aa5.85□□□□□ -1.47
PTPN4-210ENST00000485247 RIT2Q99578 217 aa5.85□□□□□ -1.47
PTPN4-210ENST00000485247 RSRP1Q9BUV0 290 aa5.85□□□□□ -1.47
PTPN4-210ENST00000485247 TEKT3Q9BXF9 490 aa5.85□□□□□ -1.47
PTPN4-210ENST00000485247 GLT8D2Q9H1C3 349 aa5.85□□□□□ -1.47
PTPN4-210ENST00000485247 EBF3Q9H4W6 596 aa5.85□□□□□ -1.47
PTPN4-210ENST00000485247 CARS2Q9HA77 564 aaKnown RBP5.85□□□□□ -1.47
PTPN4-210ENST00000485247 GKN1Q9NS71 199 aa5.85□□□□□ -1.47
PTPN4-210ENST00000485247 C19orf73Q9NVV2 129 aa5.85□□□□□ -1.47
PTPN4-210ENST00000485247 CTNND2Q9UQB3 1225 aa5.85□□□□□ -1.47
PTPN4-210ENST00000485247 APOBEC2Q9Y235 224 aaKnown RBP5.85□□□□□ -1.47
PTPN4-210ENST00000485247 ADAMTS9Q9P2N4 1935 aa5.85□□□□□ -1.47
PTPN4-210ENST00000485247 KIF26AQ9ULI4 1882 aaPredicted RBP5.85□□□□□ -1.47
PTPN4-210ENST00000485247 USP9XQ93008 2570 aaPredicted RBP5.84□□□□□ -1.47
PTPN4-210ENST00000485247 SPTA1P02549 2419 aa5.84□□□□□ -1.47
PTPN4-210ENST00000485247 FAM149AA5PLN7 773 aa5.84□□□□□ -1.47
PTPN4-210ENST00000485247 CAPN8A6NHC0 703 aa5.84□□□□□ -1.47
PTPN4-210ENST00000485247 HIP1O00291 1037 aa5.84□□□□□ -1.47
PTPN4-210ENST00000485247 ASAP2O43150 1006 aa5.84□□□□□ -1.47
PTPN4-210ENST00000485247 TRAPPC3O43617 180 aa5.84□□□□□ -1.47
PTPN4-210ENST00000485247 PLCG1P19174 1290 aa5.84□□□□□ -1.47
PTPN4-210ENST00000485247 DRD1P21728 446 aa5.84□□□□□ -1.47
PTPN4-210ENST00000485247 CIITAP33076 1130 aa5.84□□□□□ -1.47
PTPN4-210ENST00000485247 EIF2S3P41091 472 aaKnown RBP5.84□□□□□ -1.47
PTPN4-210ENST00000485247 MCM2P49736 904 aa5.84□□□□□ -1.47
PTPN4-210ENST00000485247 CLCNKBP51801 687 aa5.84□□□□□ -1.47
PTPN4-210ENST00000485247 PTENP60484 403 aa5.84□□□□□ -1.47
PTPN4-210ENST00000485247 PSMC5P62195 406 aa5.84□□□□□ -1.47
PTPN4-210ENST00000485247 MBTD1Q05BQ5 628 aa5.84□□□□□ -1.47
PTPN4-210ENST00000485247 PCBP1Q15365 356 aaKnown RBP eCLIP5.84□□□□□ -1.47
PTPN4-210ENST00000485247 NAB2Q15742 525 aa5.84□□□□□ -1.47
PTPN4-210ENST00000485247 DUOXA1Q1HG43 343 aa5.84□□□□□ -1.47
PTPN4-210ENST00000485247 FBXO43Q4G163 708 aa5.84□□□□□ -1.47
PTPN4-210ENST00000485247 TMEM201Q5SNT2 666 aa5.84□□□□□ -1.47
PTPN4-210ENST00000485247 GPR158Q5T848 1215 aa5.84□□□□□ -1.47
PTPN4-210ENST00000485247 LYSMD4Q5XG99 296 aa5.84□□□□□ -1.47
PTPN4-210ENST00000485247 TPGS2Q68CL5 300 aa5.84□□□□□ -1.47
PTPN4-210ENST00000485247 PCSK4Q6UW60 755 aa5.84□□□□□ -1.47
PTPN4-210ENST00000485247 CD300LGQ6UXG3 332 aa5.84□□□□□ -1.47
PTPN4-210ENST00000485247 TMPRSS7Q7RTY8 843 aa5.84□□□□□ -1.47
PTPN4-210ENST00000485247 RASSF3Q86WH2 238 aa5.84□□□□□ -1.47
PTPN4-210ENST00000485247 MICU3Q86XE3 530 aa5.84□□□□□ -1.47
PTPN4-210ENST00000485247 TMC8Q8IU68 726 aa5.84□□□□□ -1.47
PTPN4-210ENST00000485247 NAXDQ8IW45 347 aa5.84□□□□□ -1.47
PTPN4-210ENST00000485247 POU5F2Q8N7G0 328 aa5.84□□□□□ -1.47
PTPN4-210ENST00000485247 MDGA1Q8NFP4 955 aa5.84□□□□□ -1.47
PTPN4-210ENST00000485247 RDM1Q8NG50 284 aa5.84□□□□□ -1.47
PTPN4-210ENST00000485247 FBXO27Q8NI29 283 aa5.84□□□□□ -1.47
PTPN4-210ENST00000485247 EXOC6Q8TAG9 804 aa5.84□□□□□ -1.47
PTPN4-210ENST00000485247 SLC5A5Q92911 643 aa5.84□□□□□ -1.47
PTPN4-210ENST00000485247 CCDC136Q96JN2 1154 aa5.84□□□□□ -1.47
PTPN4-210ENST00000485247 CNOT6LQ96LI5 555 aaKnown RBP5.84□□□□□ -1.47
PTPN4-210ENST00000485247 P2RY13Q9BPV8 354 aa5.84□□□□□ -1.47
PTPN4-210ENST00000485247 POLR3CQ9BUI4 534 aaPredicted RBP5.84□□□□□ -1.47
PTPN4-210ENST00000485247 LRRC3Q9BY71 257 aa5.84□□□□□ -1.47
PTPN4-210ENST00000485247 KRTAP9-9Q9BYP9 154 aa5.84□□□□□ -1.47
PTPN4-210ENST00000485247 KRTAP9-4Q9BYQ2 154 aa5.84□□□□□ -1.47
PTPN4-210ENST00000485247 DHX33Q9H6R0 707 aaKnown RBP5.84□□□□□ -1.47
PTPN4-210ENST00000485247 HPS4Q9NQG7 708 aa5.84□□□□□ -1.47
PTPN4-210ENST00000485247 THG1LQ9NWX6 298 aaKnown RBP5.84□□□□□ -1.47
PTPN4-210ENST00000485247 BARHL2Q9NY43 387 aa5.84□□□□□ -1.47
PTPN4-210ENST00000485247 OBP2AQ9NY56 170 aa5.84□□□□□ -1.47
PTPN4-210ENST00000485247 FBXL5Q9UKA1 691 aa5.84□□□□□ -1.47
PTPN4-210ENST00000485247 PILRBQ9UKJ0 227 aa5.84□□□□□ -1.47
PTPN4-210ENST00000485247 TPCN1Q9ULQ1 816 aa5.84□□□□□ -1.47
PTPN4-210ENST00000485247 SLC12A7Q9Y666 1083 aa5.84□□□□□ -1.47
PTPN4-210ENST00000485247 CFAP46Q8IYW2 2715 aa5.83□□□□□ -1.48
PTPN4-210ENST00000485247 A0A1B0GUA9 196 aa5.83□□□□□ -1.48
PTPN4-210ENST00000485247 ANTXRLA6NF34 631 aa5.83□□□□□ -1.48
PTPN4-210ENST00000485247 WASH4PA8MWX3 477 aa5.83□□□□□ -1.48
PTPN4-210ENST00000485247 TMEM189-UBE2V1I3L0A0 370 aa5.83□□□□□ -1.48
PTPN4-210ENST00000485247 SH2B2O14492 632 aaPredicted RBP5.83□□□□□ -1.48
PTPN4-210ENST00000485247 TBX3O15119 743 aa5.83□□□□□ -1.48
PTPN4-210ENST00000485247 PRC1O43663 620 aa5.83□□□□□ -1.48
PTPN4-210ENST00000485247 DNAJA2O60884 412 aa5.83□□□□□ -1.48
PTPN4-210ENST00000485247 PSMD10O75832 226 aa5.83□□□□□ -1.48
PTPN4-210ENST00000485247 RECQL4O94761 1208 aa5.83□□□□□ -1.48
PTPN4-210ENST00000485247 BPNT1O95861 308 aa5.83□□□□□ -1.48
PTPN4-210ENST00000485247 NTRK1P04629 796 aa5.83□□□□□ -1.48
PTPN4-210ENST00000485247 SERPINF2P08697 491 aa5.83□□□□□ -1.48
PTPN4-210ENST00000485247 ARSAP15289 507 aa5.83□□□□□ -1.48
PTPN4-210ENST00000485247 KIR3DL1P43629 444 aa5.83□□□□□ -1.48
PTPN4-210ENST00000485247 AMPD2Q01433 879 aa5.83□□□□□ -1.48
PTPN4-210ENST00000485247 PTH1RQ03431 593 aa5.83□□□□□ -1.48
PTPN4-210ENST00000485247 MRPL58Q14197 206 aaKnown RBP5.83□□□□□ -1.48
PTPN4-210ENST00000485247 EMC2Q15006 297 aa5.83□□□□□ -1.48
PTPN4-210ENST00000485247 UPP1Q16831 310 aa5.83□□□□□ -1.48
PTPN4-210ENST00000485247 CTXN3Q4LDR2 81 aa5.83□□□□□ -1.48
PTPN4-210ENST00000485247 TAF1BQ53T94 588 aaPredicted RBP5.83□□□□□ -1.48
PTPN4-210ENST00000485247 C2orf27AQ580R0 203 aa5.83□□□□□ -1.48
PTPN4-210ENST00000485247 GLRA4Q5JXX5 417 aa5.83□□□□□ -1.48
PTPN4-210ENST00000485247 GAREM2Q75VX8 874 aa5.83□□□□□ -1.48
PTPN4-210ENST00000485247 THAP5Q7Z6K1 395 aa5.83□□□□□ -1.48
PTPN4-210ENST00000485247 RELL1Q8IUW5 271 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms