RNA–Protein interactions for RNA: ENST00000485065.1

TRUB1-202, Transcript of TruB pseudouridine synthase family member 1, humanhuman

TSL 2

Gene TRUB1, Length 584 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB1-202ENST00000485065 CSH1P0DML2 217 aa10.47□□□□□ -0.73
TRUB1-202ENST00000485065 CSH2P0DML3 217 aa10.47□□□□□ -0.73
TRUB1-202ENST00000485065 HAPLN1P10915 354 aaPredicted RBP10.47□□□□□ -0.73
TRUB1-202ENST00000485065 GNSP15586 552 aa10.47□□□□□ -0.73
TRUB1-202ENST00000485065 CMA1P23946 247 aa10.47□□□□□ -0.73
TRUB1-202ENST00000485065 EIF2S3P41091 472 aaKnown RBP10.47□□□□□ -0.73
TRUB1-202ENST00000485065 KIR2DL1P43626 348 aaPredicted RBP10.47□□□□□ -0.73
TRUB1-202ENST00000485065 ALCAMQ13740 583 aa10.47□□□□□ -0.73
TRUB1-202ENST00000485065 SMAD1Q15797 465 aaKnown RBP10.47□□□□□ -0.73
TRUB1-202ENST00000485065 BMT2Q1RMZ1 405 aa10.47□□□□□ -0.73
TRUB1-202ENST00000485065 GAB4Q2WGN9 574 aa10.47□□□□□ -0.73
TRUB1-202ENST00000485065 WSCD1Q658N2 575 aa10.47□□□□□ -0.73
TRUB1-202ENST00000485065 LRRC69Q6ZNQ3 347 aa10.47□□□□□ -0.73
TRUB1-202ENST00000485065 UNC13DQ70J99 1090 aa10.47□□□□□ -0.73
TRUB1-202ENST00000485065 LIMS2Q7Z4I7 341 aa10.47□□□□□ -0.73
TRUB1-202ENST00000485065 SLC41A1Q8IVJ1 513 aa10.47□□□□□ -0.73
TRUB1-202ENST00000485065 ALLCQ8N6M5 410 aa10.47□□□□□ -0.73
TRUB1-202ENST00000485065 OR5B17Q8NGF7 314 aa10.47□□□□□ -0.73
TRUB1-202ENST00000485065 HMGB4Q8WW32 186 aa10.47□□□□□ -0.73
TRUB1-202ENST00000485065 THAP11Q96EK4 314 aa10.47□□□□□ -0.73
TRUB1-202ENST00000485065 PAGE5Q96GU1 130 aa10.47□□□□□ -0.73
TRUB1-202ENST00000485065 TMLHEQ9NVH6 421 aa10.47□□□□□ -0.73
TRUB1-202ENST00000485065 RBAKQ9NYW8 714 aaPredicted RBP10.47□□□□□ -0.73
TRUB1-202ENST00000485065 UXTQ9UBK9 157 aaPredicted RBP10.47□□□□□ -0.73
TRUB1-202ENST00000485065 CFAP45Q9UL16 551 aa10.47□□□□□ -0.73
TRUB1-202ENST00000485065 EXOC7Q9UPT5 735 aa10.47□□□□□ -0.73
TRUB1-202ENST00000485065 NFE2L3Q9Y4A8 694 aa10.47□□□□□ -0.73
TRUB1-202ENST00000485065 PCDHGB2Q9Y5G2 931 aa10.47□□□□□ -0.73
TRUB1-202ENST00000485065 WNT6Q9Y6F9 365 aa10.47□□□□□ -0.73
TRUB1-202ENST00000485065 KNL1Q8NG31 2342 aa10.47□□□□□ -0.73
TRUB1-202ENST00000485065 PTPN13Q12923 2485 aa10.47□□□□□ -0.73
TRUB1-202ENST00000485065 A0A1B0GVL5 298 aa10.46□□□□□ -0.73
TRUB1-202ENST00000485065 PVALEFA0A1B0GWK0 134 aa10.46□□□□□ -0.73
TRUB1-202ENST00000485065 KPNA7A9QM74 516 aa10.46□□□□□ -0.73
TRUB1-202ENST00000485065 EIF3DO15371 548 aaKnown RBP eCLIP10.46□□□□□ -0.73
TRUB1-202ENST00000485065 HCRTO43612 131 aa10.46□□□□□ -0.73
TRUB1-202ENST00000485065 ADAM23O75077 832 aa10.46□□□□□ -0.73
TRUB1-202ENST00000485065 ITGB3P05106 788 aa10.46□□□□□ -0.73
TRUB1-202ENST00000485065 HSP90AA1P07900 732 aaKnown RBP10.46□□□□□ -0.73
TRUB1-202ENST00000485065 SLFN14P0C7P3 912 aa10.46□□□□□ -0.73
TRUB1-202ENST00000485065 ODC1P11926 461 aa10.46□□□□□ -0.73
TRUB1-202ENST00000485065 ITPKBP27987 946 aa10.46□□□□□ -0.73
TRUB1-202ENST00000485065 TNFRSF4P43489 277 aa10.46□□□□□ -0.73
TRUB1-202ENST00000485065 AFMP43652 599 aa10.46□□□□□ -0.73
TRUB1-202ENST00000485065 TAF6P49848 677 aa10.46□□□□□ -0.73
TRUB1-202ENST00000485065 ASIC1P78348 528 aa10.46□□□□□ -0.73
TRUB1-202ENST00000485065 TFAMQ00059 246 aaKnown RBP10.46□□□□□ -0.73
TRUB1-202ENST00000485065 SRSF1Q07955 248 aaKnown RBP eCLIP10.46□□□□□ -0.73
TRUB1-202ENST00000485065 STK4Q13043 487 aa10.46□□□□□ -0.73
TRUB1-202ENST00000485065 SLC39A12Q504Y0 691 aa10.46□□□□□ -0.73
TRUB1-202ENST00000485065 FAM26FQ5R3K3 315 aa10.46□□□□□ -0.73
TRUB1-202ENST00000485065 SYCP2LQ5T4T6 812 aa10.46□□□□□ -0.73
TRUB1-202ENST00000485065 GPR155Q7Z3F1 870 aa10.46□□□□□ -0.73
TRUB1-202ENST00000485065 OSTM1Q86WC4 334 aa10.46□□□□□ -0.73
TRUB1-202ENST00000485065 NT5DC4Q86YG4 428 aa10.46□□□□□ -0.73
TRUB1-202ENST00000485065 SYCP3Q8IZU3 236 aa10.46□□□□□ -0.73
TRUB1-202ENST00000485065 PGBD3Q8N328 593 aa10.46□□□□□ -0.73
TRUB1-202ENST00000485065 GPD1LQ8N335 351 aa10.46□□□□□ -0.73
TRUB1-202ENST00000485065 SPATA18Q8TC71 538 aa10.46□□□□□ -0.73
TRUB1-202ENST00000485065 GIPC2Q8TF65 315 aa10.46□□□□□ -0.73
TRUB1-202ENST00000485065 FOXJ1Q92949 421 aa10.46□□□□□ -0.73
TRUB1-202ENST00000485065 TRMT2BQ96GJ1 504 aaKnown RBP10.46□□□□□ -0.73
TRUB1-202ENST00000485065 MYRFLQ96LU7 910 aa10.46□□□□□ -0.73
TRUB1-202ENST00000485065 FCRL3Q96P31 734 aaPredicted RBP10.46□□□□□ -0.73
TRUB1-202ENST00000485065 PKMYT1Q99640 499 aa10.46□□□□□ -0.73
TRUB1-202ENST00000485065 PYM1Q9BRP8 204 aaKnown RBP10.46□□□□□ -0.73
TRUB1-202ENST00000485065 LINC00597Q9H2U6 94 aa10.46□□□□□ -0.73
TRUB1-202ENST00000485065 SLC39A2Q9NP94 309 aa10.46□□□□□ -0.73
TRUB1-202ENST00000485065 AGPAT3Q9NRZ7 376 aa10.46□□□□□ -0.73
TRUB1-202ENST00000485065 INTS13Q9NVM9 706 aa10.46□□□□□ -0.73
TRUB1-202ENST00000485065 HSPBP1Q9NZL4 362 aa10.46□□□□□ -0.73
TRUB1-202ENST00000485065 DSEQ9UL01 958 aa10.46□□□□□ -0.73
TRUB1-202ENST00000485065 AGAP1Q9UPQ3 857 aa10.46□□□□□ -0.73
TRUB1-202ENST00000485065 FCF1Q9Y324 198 aaKnown RBP10.46□□□□□ -0.73
TRUB1-202ENST00000485065 USP9XQ93008 2570 aaPredicted RBP10.45□□□□□ -0.74
TRUB1-202ENST00000485065 TRAV19A0A0A6YYK7 116 aa10.45□□□□□ -0.74
TRUB1-202ENST00000485065 IGHV1OR15-9A0A0B4J2B8 117 aa10.45□□□□□ -0.74
TRUB1-202ENST00000485065 TCRBV21S2A2A0A5A6 115 aa10.45□□□□□ -0.74
TRUB1-202ENST00000485065 ANTXRLA6NF34 631 aa10.45□□□□□ -0.74
TRUB1-202ENST00000485065 ERVH48-1M5A8F1 160 aa10.45□□□□□ -0.74
TRUB1-202ENST00000485065 CLIC2O15247 247 aa10.45□□□□□ -0.74
TRUB1-202ENST00000485065 FLRT2O43155 660 aa10.45□□□□□ -0.74
TRUB1-202ENST00000485065 RRP8O43159 456 aaKnown RBP10.45□□□□□ -0.74
TRUB1-202ENST00000485065 LDHAP00338 332 aaKnown RBP10.45□□□□□ -0.74
TRUB1-202ENST00000485065 CST3P01034 146 aaPredicted RBP10.45□□□□□ -0.74
TRUB1-202ENST00000485065 NTRK1P04629 796 aa10.45□□□□□ -0.74
TRUB1-202ENST00000485065 APODP05090 189 aa10.45□□□□□ -0.74
TRUB1-202ENST00000485065 ATXN1LP0C7T5 689 aaKnown RBP10.45□□□□□ -0.74
TRUB1-202ENST00000485065 HLA-EP13747 358 aa10.45□□□□□ -0.74
TRUB1-202ENST00000485065 PFKFB1P16118 471 aa10.45□□□□□ -0.74
TRUB1-202ENST00000485065 PFKLP17858 780 aa10.45□□□□□ -0.74
TRUB1-202ENST00000485065 POLR2BP30876 1174 aaKnown RBP10.45□□□□□ -0.74
TRUB1-202ENST00000485065 AMPD3Q01432 767 aa10.45□□□□□ -0.74
TRUB1-202ENST00000485065 GRIK2Q13002 908 aa10.45□□□□□ -0.74
TRUB1-202ENST00000485065 CCDC142Q17RM4 750 aa10.45□□□□□ -0.74
TRUB1-202ENST00000485065 LCE2CQ5TA81 110 aa10.45□□□□□ -0.74
TRUB1-202ENST00000485065 PCSK4Q6UW60 755 aa10.45□□□□□ -0.74
TRUB1-202ENST00000485065 IL27RAQ6UWB1 636 aa10.45□□□□□ -0.74
TRUB1-202ENST00000485065 TRMT11Q7Z4G4 463 aaKnown RBP10.45□□□□□ -0.74
TRUB1-202ENST00000485065 PDCL2Q8N4E4 241 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms