RNA–Protein interactions for RNA: ENST00000485055.5

CCDC39-205, Transcript of coiled-coil domain containing 39, humanhuman

TSL 1 (best)

Gene CCDC39, Length 2,874 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-205ENST00000485055 EXOC1Q9NV70 894 aa5.61□□□□□ -1.51
CCDC39-205ENST00000485055 POLR3KQ9Y2Y1 108 aaPredicted RBP5.61□□□□□ -1.51
CCDC39-205ENST00000485055 MRFAP1Q9Y605 127 aa5.61□□□□□ -1.51
CCDC39-205ENST00000485055 ZBTB14O43829 449 aa5.61□□□□□ -1.51
CCDC39-205ENST00000485055 E2F6O75461 281 aa5.61□□□□□ -1.51
CCDC39-205ENST00000485055 KCNH1O95259 989 aa5.61□□□□□ -1.51
CCDC39-205ENST00000485055 ASLP04424 464 aa5.61□□□□□ -1.51
CCDC39-205ENST00000485055 CCDC172P0C7W6 258 aa5.61□□□□□ -1.51
CCDC39-205ENST00000485055 CCNYL3P0C7X3 344 aa5.61□□□□□ -1.51
CCDC39-205ENST00000485055 RPS2P15880 293 aaKnown RBP5.61□□□□□ -1.51
CCDC39-205ENST00000485055 RXRAP19793 462 aa5.61□□□□□ -1.51
CCDC39-205ENST00000485055 IGFALSP35858 605 aa5.61□□□□□ -1.51
CCDC39-205ENST00000485055 KRT2P35908 639 aa5.61□□□□□ -1.51
CCDC39-205ENST00000485055 TKTL1P51854 596 aa5.61□□□□□ -1.51
CCDC39-205ENST00000485055 PRKCEQ02156 737 aa5.61□□□□□ -1.51
CCDC39-205ENST00000485055 DSG1Q02413 1049 aa5.61□□□□□ -1.51
CCDC39-205ENST00000485055 ST3GAL1Q11201 340 aa5.61□□□□□ -1.51
CCDC39-205ENST00000485055 MPP2Q14168 576 aa5.61□□□□□ -1.51
CCDC39-205ENST00000485055 RABEP1Q15276 862 aa5.61□□□□□ -1.51
CCDC39-205ENST00000485055 HSF5Q4G112 596 aaPredicted RBP5.61□□□□□ -1.51
CCDC39-205ENST00000485055 XKR4Q5GH76 650 aa5.61□□□□□ -1.51
CCDC39-205ENST00000485055 KLHDC7AQ5VTJ3 777 aa5.61□□□□□ -1.51
CCDC39-205ENST00000485055 NPNTQ6UXI9 565 aa5.61□□□□□ -1.51
CCDC39-205ENST00000485055 DTHD1Q6ZMT9 781 aa5.61□□□□□ -1.51
CCDC39-205ENST00000485055 DDX53Q86TM3 631 aaKnown RBP5.61□□□□□ -1.51
CCDC39-205ENST00000485055 PACS2Q86VP3 889 aa5.61□□□□□ -1.51
CCDC39-205ENST00000485055 ADHFE1Q8IWW8 467 aa5.61□□□□□ -1.51
CCDC39-205ENST00000485055 ZDHHC1Q8WTX9 485 aa5.61□□□□□ -1.51
CCDC39-205ENST00000485055 RIN2Q8WYP3 895 aaPredicted RBP5.61□□□□□ -1.51
CCDC39-205ENST00000485055 MRPS27Q92552 414 aaKnown RBP5.61□□□□□ -1.51
CCDC39-205ENST00000485055 POP1Q99575 1024 aaKnown RBP5.61□□□□□ -1.51
CCDC39-205ENST00000485055 S1PR5Q9H228 398 aa5.61□□□□□ -1.51
CCDC39-205ENST00000485055 RXFP1Q9HBX9 757 aa5.61□□□□□ -1.51
CCDC39-205ENST00000485055 CYP26B1Q9NR63 512 aa5.61□□□□□ -1.51
CCDC39-205ENST00000485055 AGPAT5Q9NUQ2 364 aa5.61□□□□□ -1.51
CCDC39-205ENST00000485055 DZANK1Q9NVP4 752 aa5.61□□□□□ -1.51
CCDC39-205ENST00000485055 THG1LQ9NWX6 298 aaKnown RBP5.61□□□□□ -1.51
CCDC39-205ENST00000485055 KIF17Q9P2E2 1029 aa5.61□□□□□ -1.51
CCDC39-205ENST00000485055 KANSL3Q9P2N6 904 aa5.61□□□□□ -1.51
CCDC39-205ENST00000485055 SEPT9Q9UHD8 586 aaPredicted RBP5.61□□□□□ -1.51
CCDC39-205ENST00000485055 DDX25Q9UHL0 483 aaKnown RBP5.61□□□□□ -1.51
CCDC39-205ENST00000485055 ST3GAL5Q9UNP4 418 aa5.61□□□□□ -1.51
CCDC39-205ENST00000485055 SSX2IPQ9Y2D8 614 aa5.61□□□□□ -1.51
CCDC39-205ENST00000485055 TRAF6Q9Y4K3 522 aa5.61□□□□□ -1.51
CCDC39-205ENST00000485055 KRT87PA6NCN2 255 aa5.61□□□□□ -1.51
CCDC39-205ENST00000485055 TMEM189-UBE2V1I3L0A0 370 aa5.61□□□□□ -1.51
CCDC39-205ENST00000485055 PRODHO43272 600 aa5.61□□□□□ -1.51
CCDC39-205ENST00000485055 MGEA5O60502 916 aa5.61□□□□□ -1.51
CCDC39-205ENST00000485055 GAS7O60861 476 aa5.61□□□□□ -1.51
CCDC39-205ENST00000485055 RPS6KA5O75582 802 aa5.61□□□□□ -1.51
CCDC39-205ENST00000485055 RTN3O95197 1032 aaPredicted RBP5.61□□□□□ -1.51
CCDC39-205ENST00000485055 BAG4O95429 457 aaKnown RBP5.61□□□□□ -1.51
CCDC39-205ENST00000485055 ALDH2P05091 517 aa5.61□□□□□ -1.51
CCDC39-205ENST00000485055 C6P13671 934 aa5.61□□□□□ -1.51
CCDC39-205ENST00000485055 HYAL1Q12794 435 aa5.61□□□□□ -1.51
CCDC39-205ENST00000485055 NFE2L1Q14494 772 aa5.61□□□□□ -1.51
CCDC39-205ENST00000485055 ANO5Q75V66 913 aa5.61□□□□□ -1.51
CCDC39-205ENST00000485055 MIER3Q7Z3K6 550 aa5.61□□□□□ -1.51
CCDC39-205ENST00000485055 MTDHQ86UE4 582 aaKnown RBP5.61□□□□□ -1.51
CCDC39-205ENST00000485055 SCUBE1Q8IWY4 988 aa5.61□□□□□ -1.51
CCDC39-205ENST00000485055 SLC39A11Q8N1S5 342 aa5.61□□□□□ -1.51
CCDC39-205ENST00000485055 CCDC33Q8N5R6 958 aa5.61□□□□□ -1.51
CCDC39-205ENST00000485055 C19orf47Q8N9M1 422 aaKnown RBP5.61□□□□□ -1.51
CCDC39-205ENST00000485055 ZBTB8BQ8NAP8 495 aaPredicted RBP5.61□□□□□ -1.51
CCDC39-205ENST00000485055 ZSCAN1Q8NBB4 408 aa5.61□□□□□ -1.51
CCDC39-205ENST00000485055 SLC22A17Q8WUG5 538 aa5.61□□□□□ -1.51
CCDC39-205ENST00000485055 TMEM40Q8WWA1 233 aa5.61□□□□□ -1.51
CCDC39-205ENST00000485055 PPP1R14AQ96A00 147 aa5.61□□□□□ -1.51
CCDC39-205ENST00000485055 MFSD14AQ96MC6 490 aa5.61□□□□□ -1.51
CCDC39-205ENST00000485055 MAP7D2Q96T17 732 aa5.61□□□□□ -1.51
CCDC39-205ENST00000485055 GCOM2Q9BZD3 368 aaPredicted RBP5.61□□□□□ -1.51
CCDC39-205ENST00000485055 CNTD2Q9H8S5 307 aa5.61□□□□□ -1.51
CCDC39-205ENST00000485055 C17orf75Q9HAS0 396 aa5.61□□□□□ -1.51
CCDC39-205ENST00000485055 KCND2Q9NZV8 630 aa5.61□□□□□ -1.51
CCDC39-205ENST00000485055 DACH1Q9UI36 760 aa5.61□□□□□ -1.51
CCDC39-205ENST00000485055 LIMCH1Q9UPQ0 1083 aa5.61□□□□□ -1.51
CCDC39-205ENST00000485055 ANK1P16157 1881 aa5.6□□□□□ -1.51
CCDC39-205ENST00000485055 TRANK1O15050 2925 aa5.6□□□□□ -1.51
CCDC39-205ENST00000485055 TCRBV16S1A1N1A0A5B0 115 aa5.6□□□□□ -1.51
CCDC39-205ENST00000485055 SLC12A8A0AV02 714 aa5.6□□□□□ -1.51
CCDC39-205ENST00000485055 FAM227AF5H4B4 570 aa5.6□□□□□ -1.51
CCDC39-205ENST00000485055 NDC80O14777 642 aa5.6□□□□□ -1.51
CCDC39-205ENST00000485055 SMPD2O60906 423 aa5.6□□□□□ -1.51
CCDC39-205ENST00000485055 RTN2O75298 545 aa5.6□□□□□ -1.51
CCDC39-205ENST00000485055 MTRF1O75570 445 aaKnown RBP5.6□□□□□ -1.51
CCDC39-205ENST00000485055 PGM3O95394 542 aa5.6□□□□□ -1.51
CCDC39-205ENST00000485055 HRGP04196 525 aa5.6□□□□□ -1.51
CCDC39-205ENST00000485055 GSNP06396 782 aa5.6□□□□□ -1.51
CCDC39-205ENST00000485055 NUDT7P0C024 238 aa5.6□□□□□ -1.51
CCDC39-205ENST00000485055 SFPQP23246 707 aaKnown RBP eCLIP5.6□□□□□ -1.51
CCDC39-205ENST00000485055 CD52P31358 61 aa5.6□□□□□ -1.51
CCDC39-205ENST00000485055 PHKA2P46019 1235 aa5.6□□□□□ -1.51
CCDC39-205ENST00000485055 SULT1E1P49888 294 aa5.6□□□□□ -1.51
CCDC39-205ENST00000485055 DNM2P50570 870 aa5.6□□□□□ -1.51
CCDC39-205ENST00000485055 CASP6P55212 293 aa5.6□□□□□ -1.51
CCDC39-205ENST00000485055 PTENP60484 403 aa5.6□□□□□ -1.51
CCDC39-205ENST00000485055 EFR3AQ14156 821 aa5.6□□□□□ -1.51
CCDC39-205ENST00000485055 ME3Q16798 604 aa5.6□□□□□ -1.51
CCDC39-205ENST00000485055 PFKFB4Q16877 469 aa5.6□□□□□ -1.51
CCDC39-205ENST00000485055 C5orf22Q49AR2 442 aa5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms