RNA–Protein interactions for RNA: ENST00000484555.1

PABPC4-215, Transcript of poly(A) binding protein cytoplasmic 4, humanhuman

TSL 5

Gene PABPC4, Length 450 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC4-215ENST00000484555 PRRT4C9JH25 899 aa13.18□□□□□ -0.3
PABPC4-215ENST00000484555 CLDN5O00501 218 aa13.18□□□□□ -0.3
PABPC4-215ENST00000484555 GREM1O60565 184 aa13.18□□□□□ -0.3
PABPC4-215ENST00000484555 PRPF6O94906 941 aaKnown RBP13.18□□□□□ -0.3
PABPC4-215ENST00000484555 IFRD2Q12894 506 aaPredicted RBP13.18□□□□□ -0.3
PABPC4-215ENST00000484555 CBWD2Q8IUF1 395 aa13.18□□□□□ -0.3
PABPC4-215ENST00000484555 CADM4Q8NFZ8 388 aa13.18□□□□□ -0.3
PABPC4-215ENST00000484555 SCAMP5Q8TAC9 235 aa13.18□□□□□ -0.3
PABPC4-215ENST00000484555 BAHD1Q8TBE0 780 aaPredicted RBP13.18□□□□□ -0.3
PABPC4-215ENST00000484555 NOC3LQ8WTT2 800 aaKnown RBP13.18□□□□□ -0.3
PABPC4-215ENST00000484555 WBP2Q969T9 261 aa13.18□□□□□ -0.3
PABPC4-215ENST00000484555 TMX3Q96JJ7 454 aa13.18□□□□□ -0.3
PABPC4-215ENST00000484555 XPO6Q96QU8 1125 aaKnown RBP13.18□□□□□ -0.3
PABPC4-215ENST00000484555 CCSER2Q9H7U1 834 aa13.18□□□□□ -0.3
PABPC4-215ENST00000484555 DNAJC17Q9NVM6 304 aaKnown RBP13.18□□□□□ -0.3
PABPC4-215ENST00000484555 WDR35Q9P2L0 1181 aa13.18□□□□□ -0.3
PABPC4-215ENST00000484555 A8MXQ7 604 aa13.17□□□□□ -0.3
PABPC4-215ENST00000484555 CISD3P0C7P0 127 aa13.17□□□□□ -0.3
PABPC4-215ENST00000484555 IDEP14735 1019 aa13.17□□□□□ -0.3
PABPC4-215ENST00000484555 MAOBP27338 520 aa13.17□□□□□ -0.3
PABPC4-215ENST00000484555 CD6P30203 668 aa13.17□□□□□ -0.3
PABPC4-215ENST00000484555 ZNF132P52740 706 aa13.17□□□□□ -0.3
PABPC4-215ENST00000484555 WDR72Q3MJ13 1102 aa13.17□□□□□ -0.3
PABPC4-215ENST00000484555 PAQR9Q6ZVX9 377 aa13.17□□□□□ -0.3
PABPC4-215ENST00000484555 SCFD1Q8WVM8 642 aa13.17□□□□□ -0.3
PABPC4-215ENST00000484555 HNRNPLLQ8WVV9 542 aaKnown RBP13.17□□□□□ -0.3
PABPC4-215ENST00000484555 KCNK16Q96T55 309 aa13.17□□□□□ -0.3
PABPC4-215ENST00000484555 CD93Q9NPY3 652 aa13.17□□□□□ -0.3
PABPC4-215ENST00000484555 ITM2CQ9NQX7 267 aa13.17□□□□□ -0.3
PABPC4-215ENST00000484555 PANK4Q9NVE7 773 aa13.17□□□□□ -0.3
PABPC4-215ENST00000484555 TOR4AQ9NXH8 423 aa13.17□□□□□ -0.3
PABPC4-215ENST00000484555 WSB2Q9NYS7 404 aaPredicted RBP13.17□□□□□ -0.3
PABPC4-215ENST00000484555 HSPBP1Q9NZL4 362 aa13.17□□□□□ -0.3
PABPC4-215ENST00000484555 USP36Q9P275 1121 aaKnown RBP13.17□□□□□ -0.3
PABPC4-215ENST00000484555 FBXO10Q9UK96 956 aa13.17□□□□□ -0.3
PABPC4-215ENST00000484555 RAXQ9Y2V3 346 aa13.17□□□□□ -0.3
PABPC4-215ENST00000484555 PCDHGB2Q9Y5G2 931 aa13.17□□□□□ -0.3
PABPC4-215ENST00000484555 SRPRBQ9Y5M8 271 aaKnown RBP13.17□□□□□ -0.3
PABPC4-215ENST00000484555 ATP8B3O60423 1300 aa13.16□□□□□ -0.3
PABPC4-215ENST00000484555 TYRP14679 529 aa13.16□□□□□ -0.3
PABPC4-215ENST00000484555 ATICP31939 592 aa13.16□□□□□ -0.3
PABPC4-215ENST00000484555 SLC5A3P53794 718 aa13.16□□□□□ -0.3
PABPC4-215ENST00000484555 TNNC1P63316 161 aa13.16□□□□□ -0.3
PABPC4-215ENST00000484555 LARP1BQ659C4 914 aaKnown RBP13.16□□□□□ -0.3
PABPC4-215ENST00000484555 IL27RAQ6UWB1 636 aa13.16□□□□□ -0.3
PABPC4-215ENST00000484555 GLIS3Q8NEA6 775 aa13.16□□□□□ -0.3
PABPC4-215ENST00000484555 BBS2Q9BXC9 721 aa13.16□□□□□ -0.3
PABPC4-215ENST00000484555 KLF16Q9BXK1 252 aaPredicted RBP13.16□□□□□ -0.3
PABPC4-215ENST00000484555 SLC6A17Q9H1V8 727 aa13.16□□□□□ -0.3
PABPC4-215ENST00000484555 DMAP1Q9NPF5 467 aaPredicted RBP13.16□□□□□ -0.3
PABPC4-215ENST00000484555 TM7SF3Q9NS93 570 aa13.16□□□□□ -0.3
PABPC4-215ENST00000484555 FBXO2Q9UK22 296 aaPredicted RBP13.16□□□□□ -0.3
PABPC4-215ENST00000484555 RAD54BQ9Y620 910 aa13.16□□□□□ -0.3
PABPC4-215ENST00000484555 GCN1Q92616 2671 aaKnown RBP13.16□□□□□ -0.3
PABPC4-215ENST00000484555 A0A087WV48 116 aa13.15□□□□□ -0.3
PABPC4-215ENST00000484555 NEDD8-MDP1E9PL57 170 aa13.15□□□□□ -0.3
PABPC4-215ENST00000484555 NPC1O15118 1278 aa13.15□□□□□ -0.3
PABPC4-215ENST00000484555 TLR5O60602 858 aa13.15□□□□□ -0.3
PABPC4-215ENST00000484555 CER1O95813 267 aa13.15□□□□□ -0.3
PABPC4-215ENST00000484555 IGLV3-19P01714 112 aa13.15□□□□□ -0.3
PABPC4-215ENST00000484555 HOXD13P35453 343 aa13.15□□□□□ -0.3
PABPC4-215ENST00000484555 TXLNAP40222 546 aa13.15□□□□□ -0.3
PABPC4-215ENST00000484555 DGKGP49619 791 aa13.15□□□□□ -0.3
PABPC4-215ENST00000484555 ENPP2Q13822 863 aa13.15□□□□□ -0.3
PABPC4-215ENST00000484555 PSMD6Q15008 389 aa13.15□□□□□ -0.3
PABPC4-215ENST00000484555 RABEP1Q15276 862 aa13.15□□□□□ -0.3
PABPC4-215ENST00000484555 CCDC73Q6ZRK6 1079 aa13.15□□□□□ -0.3
PABPC4-215ENST00000484555 STXBP4Q6ZWJ1 553 aa13.15□□□□□ -0.3
PABPC4-215ENST00000484555 FAM35AQ86V20 835 aa13.15□□□□□ -0.3
PABPC4-215ENST00000484555 SCUBE3Q8IX30 993 aa13.15□□□□□ -0.3
PABPC4-215ENST00000484555 C1orf216Q8TAB5 229 aa13.15□□□□□ -0.3
PABPC4-215ENST00000484555 SETD7Q8WTS6 366 aaKnown RBP13.15□□□□□ -0.3
PABPC4-215ENST00000484555 SMARCD1Q96GM5 515 aa13.15□□□□□ -0.3
PABPC4-215ENST00000484555 TOE1Q96GM8 510 aaKnown RBP13.15□□□□□ -0.3
PABPC4-215ENST00000484555 LRIG1Q96JA1 1093 aa13.15□□□□□ -0.3
PABPC4-215ENST00000484555 CGRRF1Q99675 332 aa13.15□□□□□ -0.3
PABPC4-215ENST00000484555 CDC6Q99741 560 aa13.15□□□□□ -0.3
PABPC4-215ENST00000484555 XYLT2Q9H1B5 865 aa13.15□□□□□ -0.3
PABPC4-215ENST00000484555 GAREM1Q9H706 876 aa13.15□□□□□ -0.3
PABPC4-215ENST00000484555 VRTNQ9H8Y1 702 aa13.15□□□□□ -0.3
PABPC4-215ENST00000484555 CSNK1G1Q9HCP0 422 aa13.15□□□□□ -0.3
PABPC4-215ENST00000484555 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.15□□□□□ -0.32e-9■■■■■ 76.1
PABPC4-215ENST00000484555 CACNA2D2Q9NY47 1150 aa13.15□□□□□ -0.3
PABPC4-215ENST00000484555 GMIPQ9P107 970 aa13.15□□□□□ -0.3
PABPC4-215ENST00000484555 CLIC4Q9Y696 253 aa13.15□□□□□ -0.3
PABPC4-215ENST00000484555 STON1Q9Y6Q2 735 aa13.15□□□□□ -0.3
PABPC4-215ENST00000484555 METTL12A8MUP2 240 aa13.14□□□□□ -0.31
PABPC4-215ENST00000484555 WASH3PC4AMC7 463 aa13.14□□□□□ -0.31
PABPC4-215ENST00000484555 BCAT2O15382 392 aaPredicted RBP13.14□□□□□ -0.31
PABPC4-215ENST00000484555 FLRT2O43155 660 aa13.14□□□□□ -0.31
PABPC4-215ENST00000484555 CILPO75339 1184 aa13.14□□□□□ -0.31
PABPC4-215ENST00000484555 DLATP10515 647 aaKnown RBP13.14□□□□□ -0.31
PABPC4-215ENST00000484555 IRF1P10914 325 aa13.14□□□□□ -0.31
PABPC4-215ENST00000484555 NCAM1P13591 858 aa13.14□□□□□ -0.31
PABPC4-215ENST00000484555 TNNI1P19237 187 aa13.14□□□□□ -0.31
PABPC4-215ENST00000484555 ACO1P21399 889 aaKnown RBP13.14□□□□□ -0.31
PABPC4-215ENST00000484555 OXTRP30559 389 aa13.14□□□□□ -0.31
PABPC4-215ENST00000484555 MATKP42679 507 aa13.14□□□□□ -0.31
PABPC4-215ENST00000484555 PGFP49763 221 aa13.14□□□□□ -0.31
PABPC4-215ENST00000484555 BNC1Q01954 994 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms