RNA–Protein interactions for RNA: ENST00000484275.1

SCAF11-207, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 3

Gene SCAF11, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-207ENST00000484275 ZSCAN21Q9Y5A6 473 aaPredicted RBP5.29□□□□□ -1.56
SCAF11-207ENST00000484275 CNTNAP2Q9UHC6 1331 aa5.28□□□□□ -1.56
SCAF11-207ENST00000484275 FYB1O15117 783 aa5.28□□□□□ -1.56
SCAF11-207ENST00000484275 CTNND1O60716 968 aaKnown RBP5.28□□□□□ -1.56
SCAF11-207ENST00000484275 RASSF9O75901 435 aa5.28□□□□□ -1.56
SCAF11-207ENST00000484275 PIAS2O75928 621 aa5.28□□□□□ -1.56
SCAF11-207ENST00000484275 OAZ2O95190 189 aa5.28□□□□□ -1.56
SCAF11-207ENST00000484275 PDGFRBP09619 1106 aa5.28□□□□□ -1.56
SCAF11-207ENST00000484275 IL1R1P14778 569 aa5.28□□□□□ -1.56
SCAF11-207ENST00000484275 NTSR1P30989 418 aa5.28□□□□□ -1.56
SCAF11-207ENST00000484275 HTR6P50406 440 aa5.28□□□□□ -1.56
SCAF11-207ENST00000484275 GPC5P78333 572 aa5.28□□□□□ -1.56
SCAF11-207ENST00000484275 ARHGEF7Q14155 803 aa5.28□□□□□ -1.56
SCAF11-207ENST00000484275 NMD3Q96D46 503 aaKnown RBP5.28□□□□□ -1.56
SCAF11-207ENST00000484275 ZFYVE19Q96K21 471 aa5.28□□□□□ -1.56
SCAF11-207ENST00000484275 ZIM2Q9NZV7 527 aa5.28□□□□□ -1.56
SCAF11-207ENST00000484275 L1RE1Q9UN81 338 aa5.28□□□□□ -1.56
SCAF11-207ENST00000484275 PAXBP1Q9Y5B6 917 aa5.28□□□□□ -1.56
SCAF11-207ENST00000484275 H3BNX3 289 aa5.27□□□□□ -1.57
SCAF11-207ENST00000484275 PRAMEF2O60811 474 aa5.27□□□□□ -1.57
SCAF11-207ENST00000484275 BRAFP15056 766 aa5.27□□□□□ -1.57
SCAF11-207ENST00000484275 TNFRSF1BP20333 461 aa5.27□□□□□ -1.57
SCAF11-207ENST00000484275 IBSPP21815 317 aaPredicted RBP5.27□□□□□ -1.57
SCAF11-207ENST00000484275 ME1P48163 572 aa5.27□□□□□ -1.57
SCAF11-207ENST00000484275 RPS16P62249 146 aaKnown RBP5.27□□□□□ -1.57
SCAF11-207ENST00000484275 RPS13P62277 151 aaKnown RBP5.27□□□□□ -1.57
SCAF11-207ENST00000484275 STK3Q13188 491 aa5.27□□□□□ -1.57
SCAF11-207ENST00000484275 CNN3Q15417 329 aaKnown RBP5.27□□□□□ -1.57
SCAF11-207ENST00000484275 CC2D1BQ5T0F9 858 aaKnown RBP5.27□□□□□ -1.57
SCAF11-207ENST00000484275 TMEM63BQ5T3F8 832 aa5.27□□□□□ -1.57
SCAF11-207ENST00000484275 ANO7Q6IWH7 933 aa5.27□□□□□ -1.57
SCAF11-207ENST00000484275 ARFGAP1Q8N6T3 406 aa5.27□□□□□ -1.57
SCAF11-207ENST00000484275 DHX36Q9H2U1 1008 aaKnown RBP5.27□□□□□ -1.57
SCAF11-207ENST00000484275 MLXIPLQ9NP71 852 aa5.27□□□□□ -1.57
SCAF11-207ENST00000484275 ZBTB40Q9NUA8 1239 aa5.27□□□□□ -1.57
SCAF11-207ENST00000484275 COL20A1Q9P218 1284 aa5.27□□□□□ -1.57
SCAF11-207ENST00000484275 SQORQ9Y6N5 450 aa5.27□□□□□ -1.57
SCAF11-207ENST00000484275 LOC105378220A0A1B0GUY1 285 aaPredicted RBP5.26□□□□□ -1.57
SCAF11-207ENST00000484275 CFAP69A5D8W1 941 aa5.26□□□□□ -1.57
SCAF11-207ENST00000484275 A6NNZ2 444 aa5.26□□□□□ -1.57
SCAF11-207ENST00000484275 A8MVJ9 347 aa5.26□□□□□ -1.57
SCAF11-207ENST00000484275 RAB27BO00194 218 aa5.26□□□□□ -1.57
SCAF11-207ENST00000484275 RRHO14718 337 aa5.26□□□□□ -1.57
SCAF11-207ENST00000484275 PRPF3O43395 683 aaKnown RBP5.26□□□□□ -1.57
SCAF11-207ENST00000484275 CRYABP02511 175 aaKnown RBP5.26□□□□□ -1.57
SCAF11-207ENST00000484275 FGF2P09038 288 aa5.26□□□□□ -1.57
SCAF11-207ENST00000484275 MTX1Q13505 466 aa5.26□□□□□ -1.57
SCAF11-207ENST00000484275 KRTAP5-11Q6L8G4 156 aa5.26□□□□□ -1.57
SCAF11-207ENST00000484275 KIAA1161Q6NSJ0 714 aa5.26□□□□□ -1.57
SCAF11-207ENST00000484275 RAVER1Q8IY67 606 aaKnown RBP5.26□□□□□ -1.57
SCAF11-207ENST00000484275 PNPLA1Q8N8W4 532 aa5.26□□□□□ -1.57
SCAF11-207ENST00000484275 ACRBPQ8NEB7 543 aa5.26□□□□□ -1.57
SCAF11-207ENST00000484275 DKK4Q9UBT3 224 aa5.26□□□□□ -1.57
SCAF11-207ENST00000484275 NKX1-2Q9UD57 310 aaPredicted RBP5.26□□□□□ -1.57
SCAF11-207ENST00000484275 AFF4Q9UHB7 1163 aaKnown RBP5.26□□□□□ -1.57
SCAF11-207ENST00000484275 MID2Q9UJV3 735 aa5.26□□□□□ -1.57
SCAF11-207ENST00000484275 HDAC9Q9UKV0 1011 aa5.26□□□□□ -1.57
SCAF11-207ENST00000484275 FZD4Q9ULV1 537 aa5.26□□□□□ -1.57
SCAF11-207ENST00000484275 HS3ST3B1Q9Y662 390 aa5.26□□□□□ -1.57
SCAF11-207ENST00000484275 B4DGG1 531 aa5.25□□□□□ -1.57
SCAF11-207ENST00000484275 FAM227AF5H4B4 570 aa5.25□□□□□ -1.57
SCAF11-207ENST00000484275 CA12O43570 354 aa5.25□□□□□ -1.57
SCAF11-207ENST00000484275 ACVR2AP27037 513 aa5.25□□□□□ -1.57
SCAF11-207ENST00000484275 CPT1AP50416 773 aa5.25□□□□□ -1.57
SCAF11-207ENST00000484275 FMO1Q01740 532 aa5.25□□□□□ -1.57
SCAF11-207ENST00000484275 SLC29A2Q14542 456 aa5.25□□□□□ -1.57
SCAF11-207ENST00000484275 KCNAB1Q14722 419 aa5.25□□□□□ -1.57
SCAF11-207ENST00000484275 CNGA2Q16280 664 aa5.25□□□□□ -1.57
SCAF11-207ENST00000484275 SLC9C1Q4G0N8 1177 aa5.25□□□□□ -1.57
SCAF11-207ENST00000484275 COLCA1Q6ZS62 124 aa5.25□□□□□ -1.57
SCAF11-207ENST00000484275 UBE2Q1Q7Z7E8 422 aa5.25□□□□□ -1.57
SCAF11-207ENST00000484275 PELI3Q8N2H9 469 aa5.25□□□□□ -1.57
SCAF11-207ENST00000484275 HIC2Q96JB3 615 aa5.25□□□□□ -1.57
SCAF11-207ENST00000484275 TRMOQ9BU70 441 aa5.25□□□□□ -1.57
SCAF11-207ENST00000484275 TM2D2Q9BX73 214 aa5.25□□□□□ -1.57
SCAF11-207ENST00000484275 FAM234AQ9H0X4 552 aa5.25□□□□□ -1.57
SCAF11-207ENST00000484275 CHST8Q9H2A9 424 aa5.25□□□□□ -1.57
SCAF11-207ENST00000484275 USP29Q9HBJ7 922 aa5.25□□□□□ -1.57
SCAF11-207ENST00000484275 SEMA5BQ9P283 1151 aa5.25□□□□□ -1.57
SCAF11-207ENST00000484275 VPS51Q9UID3 782 aa5.25□□□□□ -1.57
SCAF11-207ENST00000484275 TTBK1Q5TCY1 1321 aaPredicted RBP5.24□□□□□ -1.57
SCAF11-207ENST00000484275 C16orf96A6NNT2 1141 aa5.24□□□□□ -1.57
SCAF11-207ENST00000484275 ISM1B1AKI9 464 aa5.24□□□□□ -1.57
SCAF11-207ENST00000484275 SMAD6O43541 496 aaKnown RBP5.24□□□□□ -1.57
SCAF11-207ENST00000484275 FRS3O43559 492 aa5.24□□□□□ -1.57
SCAF11-207ENST00000484275 MBPP02686 304 aaPredicted RBP5.24□□□□□ -1.57
SCAF11-207ENST00000484275 TXNP10599 105 aaKnown RBP5.24□□□□□ -1.57
SCAF11-207ENST00000484275 ZKSCAN1P17029 563 aaPredicted RBP5.24□□□□□ -1.57
SCAF11-207ENST00000484275 STIM1Q13586 685 aa5.24□□□□□ -1.57
SCAF11-207ENST00000484275 KPNB1Q14974 876 aaKnown RBP5.24□□□□□ -1.57
SCAF11-207ENST00000484275 PRR11Q96HE9 360 aaPredicted RBP5.24□□□□□ -1.57
SCAF11-207ENST00000484275 LYZL4Q96KX0 146 aa5.24□□□□□ -1.57
SCAF11-207ENST00000484275 TPCN1Q9ULQ1 816 aa5.24□□□□□ -1.57
SCAF11-207ENST00000484275 SLC27A6Q9Y2P4 619 aa5.24□□□□□ -1.57
SCAF11-207ENST00000484275 FAM90A8PA6NJQ4 464 aa5.23□□□□□ -1.57
SCAF11-207ENST00000484275 MARCH6O60337 910 aa5.23□□□□□ -1.57
SCAF11-207ENST00000484275 FAM90A13PP0C7W8 464 aa5.23□□□□□ -1.57
SCAF11-207ENST00000484275 FAM90A24PP0C7X0 464 aa5.23□□□□□ -1.57
SCAF11-207ENST00000484275 BTF3P20290 206 aaKnown RBP5.23□□□□□ -1.57
SCAF11-207ENST00000484275 ADRA1DP25100 572 aa5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms