RNA–Protein interactions for RNA: ENST00000483763.5

CDC42SE1-204, Transcript of CDC42 small effector 1, humanhuman

TSL 1 (best)

Gene CDC42SE1, Length 2,379 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-204ENST00000483763 MTMR10Q9NXD2 777 aa9.22□□□□□ -0.93
CDC42SE1-204ENST00000483763 ZKSCAN7Q9P0L1 754 aaPredicted RBP9.22□□□□□ -0.93
CDC42SE1-204ENST00000483763 PHF24Q9UPV7 400 aa9.22□□□□□ -0.93
CDC42SE1-204ENST00000483763 DRG1Q9Y295 367 aaKnown RBP9.22□□□□□ -0.93
CDC42SE1-204ENST00000483763 HHLA1C9JL84 531 aa9.22□□□□□ -0.93
CDC42SE1-204ENST00000483763 APOC4-APOC2K7ER74 178 aa9.22□□□□□ -0.93
CDC42SE1-204ENST00000483763 M0QZQ0 153 aa9.22□□□□□ -0.93
CDC42SE1-204ENST00000483763 SGK1O00141 431 aa9.22□□□□□ -0.93
CDC42SE1-204ENST00000483763 RIPK2O43353 540 aa9.22□□□□□ -0.93
CDC42SE1-204ENST00000483763 AP1G2O75843 785 aa9.22□□□□□ -0.93
CDC42SE1-204ENST00000483763 APOC2P02655 101 aa9.22□□□□□ -0.93
CDC42SE1-204ENST00000483763 FAM200BP0CF97 657 aa9.22□□□□□ -0.93
CDC42SE1-204ENST00000483763 GBP1P32455 592 aa9.22□□□□□ -0.93
CDC42SE1-204ENST00000483763 MATKP42679 507 aa9.22□□□□□ -0.93
CDC42SE1-204ENST00000483763 PTPN9P43378 593 aa9.22□□□□□ -0.93
CDC42SE1-204ENST00000483763 ACADSBP45954 432 aa9.22□□□□□ -0.93
CDC42SE1-204ENST00000483763 ATN1P54259 1190 aaPredicted RBP9.22□□□□□ -0.93
CDC42SE1-204ENST00000483763 YWHAZP63104 245 aaKnown RBP9.22□□□□□ -0.93
CDC42SE1-204ENST00000483763 FAM189BP81408 668 aa9.22□□□□□ -0.93
CDC42SE1-204ENST00000483763 GAD2Q05329 585 aa9.22□□□□□ -0.93
CDC42SE1-204ENST00000483763 GPS1Q13098 491 aa9.22□□□□□ -0.93
CDC42SE1-204ENST00000483763 MTMR3Q13615 1198 aa9.22□□□□□ -0.93
CDC42SE1-204ENST00000483763 BOLA3Q53S33 107 aa9.22□□□□□ -0.93
CDC42SE1-204ENST00000483763 PPP6R3Q5H9R7 873 aaPredicted RBP9.22□□□□□ -0.93
CDC42SE1-204ENST00000483763 IZUMO3Q5VZ72 239 aa9.22□□□□□ -0.93
CDC42SE1-204ENST00000483763 HIBCHQ6NVY1 386 aaPredicted RBP9.22□□□□□ -0.93
CDC42SE1-204ENST00000483763 LRIG3Q6UXM1 1119 aa9.22□□□□□ -0.93
CDC42SE1-204ENST00000483763 ARCQ7LC44 396 aa9.22□□□□□ -0.93
CDC42SE1-204ENST00000483763 ZC3H18Q86VM9 953 aaKnown RBP9.22□□□□□ -0.93
CDC42SE1-204ENST00000483763 FAM131BQ86XD5 332 aa9.22□□□□□ -0.93
CDC42SE1-204ENST00000483763 FAM126BQ8IXS8 530 aa9.22□□□□□ -0.93
CDC42SE1-204ENST00000483763 HS6ST3Q8IZP7 471 aa9.22□□□□□ -0.93
CDC42SE1-204ENST00000483763 PYROXD2Q8N2H3 581 aa9.22□□□□□ -0.93
CDC42SE1-204ENST00000483763 TAB3Q8N5C8 712 aaPredicted RBP9.22□□□□□ -0.93
CDC42SE1-204ENST00000483763 SPATA18Q8TC71 538 aa9.22□□□□□ -0.93
CDC42SE1-204ENST00000483763 KCTD13Q8WZ19 329 aa9.22□□□□□ -0.93
CDC42SE1-204ENST00000483763 PGBD4Q96DM1 585 aa9.22□□□□□ -0.93
CDC42SE1-204ENST00000483763 RNF157Q96PX1 679 aa9.22□□□□□ -0.93
CDC42SE1-204ENST00000483763 PKMYT1Q99640 499 aa9.22□□□□□ -0.93
CDC42SE1-204ENST00000483763 CDC42EP4Q9H3Q1 356 aaKnown RBP9.22□□□□□ -0.93
CDC42SE1-204ENST00000483763 CYLDQ9NQC7 956 aa9.22□□□□□ -0.93
CDC42SE1-204ENST00000483763 PAK6Q9NQU5 681 aaPredicted RBP9.22□□□□□ -0.93
CDC42SE1-204ENST00000483763 DNAJB4Q9UDY4 337 aa9.22□□□□□ -0.93
CDC42SE1-204ENST00000483763 MTRF1LQ9UGC7 380 aaKnown RBP9.22□□□□□ -0.93
CDC42SE1-204ENST00000483763 ANAPC5Q9UJX4 755 aa9.22□□□□□ -0.93
CDC42SE1-204ENST00000483763 NAALADL1Q9UQQ1 740 aa9.22□□□□□ -0.93
CDC42SE1-204ENST00000483763 GOLGA8KD6RF30 607 aa9.21□□□□□ -0.93
CDC42SE1-204ENST00000483763 I6L893 689 aaPredicted RBP9.21□□□□□ -0.93
CDC42SE1-204ENST00000483763 DNM1LO00429 736 aa9.21□□□□□ -0.93
CDC42SE1-204ENST00000483763 INPPL1O15357 1258 aa9.21□□□□□ -0.93
CDC42SE1-204ENST00000483763 CAND2O75155 1236 aa9.21□□□□□ -0.93
CDC42SE1-204ENST00000483763 NUDT17P0C025 328 aa9.21□□□□□ -0.93
CDC42SE1-204ENST00000483763 USP17L7P0C7H9 530 aa9.21□□□□□ -0.93
CDC42SE1-204ENST00000483763 L1CAMP32004 1257 aa9.21□□□□□ -0.93
CDC42SE1-204ENST00000483763 MNX1P50219 401 aaPredicted RBP9.21□□□□□ -0.93
CDC42SE1-204ENST00000483763 DSC1Q08554 894 aa9.21□□□□□ -0.93
CDC42SE1-204ENST00000483763 ANKRD20A8PQ5CZ79 823 aa9.21□□□□□ -0.93
CDC42SE1-204ENST00000483763 ERMARDQ5T6L9 678 aa9.21□□□□□ -0.93
CDC42SE1-204ENST00000483763 TTC19Q6DKK2 380 aaPredicted RBP9.21□□□□□ -0.93
CDC42SE1-204ENST00000483763 FAM171BQ6P995 826 aa9.21□□□□□ -0.93
CDC42SE1-204ENST00000483763 C1orf228Q6PIY5 440 aa9.21□□□□□ -0.93
CDC42SE1-204ENST00000483763 BHLHA9Q7RTU4 235 aa9.21□□□□□ -0.93
CDC42SE1-204ENST00000483763 CCDC33Q8N5R6 958 aa9.21□□□□□ -0.93
CDC42SE1-204ENST00000483763 FAM71DQ8N9W8 422 aa9.21□□□□□ -0.93
CDC42SE1-204ENST00000483763 DBF4BQ8NFT6 615 aa9.21□□□□□ -0.93
CDC42SE1-204ENST00000483763 ADAM32Q8TC27 787 aa9.21□□□□□ -0.93
CDC42SE1-204ENST00000483763 NT5C3BQ969T7 300 aa9.21□□□□□ -0.93
CDC42SE1-204ENST00000483763 MYLPFQ96A32 169 aa9.21□□□□□ -0.93
CDC42SE1-204ENST00000483763 EXOC4Q96A65 974 aa9.21□□□□□ -0.93
CDC42SE1-204ENST00000483763 ATP6V1G3Q96LB4 118 aa9.21□□□□□ -0.93
CDC42SE1-204ENST00000483763 ULBP1Q9BZM6 244 aa9.21□□□□□ -0.93
CDC42SE1-204ENST00000483763 LRRC4Q9HBW1 653 aa9.21□□□□□ -0.93
CDC42SE1-204ENST00000483763 ANLNQ9NQW6 1124 aa9.21□□□□□ -0.93
CDC42SE1-204ENST00000483763 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP9.21□□□□□ -0.93
CDC42SE1-204ENST00000483763 HCSTQ9UBK5 93 aa9.21□□□□□ -0.93
CDC42SE1-204ENST00000483763 CDH9Q9ULB4 789 aa9.21□□□□□ -0.93
CDC42SE1-204ENST00000483763 SYNJ2BP-COX16A0A087WUM0 186 aa9.21□□□□□ -0.94
CDC42SE1-204ENST00000483763 MDM4O15151 490 aa9.21□□□□□ -0.94
CDC42SE1-204ENST00000483763 ACSL3O95573 720 aa9.21□□□□□ -0.94
CDC42SE1-204ENST00000483763 CYP11A1P05108 521 aa9.21□□□□□ -0.94
CDC42SE1-204ENST00000483763 OR4Q2P0C623 313 aa9.21□□□□□ -0.94
CDC42SE1-204ENST00000483763 RBP3P10745 1247 aa9.21□□□□□ -0.94
CDC42SE1-204ENST00000483763 ODC1P11926 461 aa9.21□□□□□ -0.94
CDC42SE1-204ENST00000483763 BDNFP23560 247 aa9.21□□□□□ -0.94
CDC42SE1-204ENST00000483763 SCNN1AP37088 669 aa9.21□□□□□ -0.94
CDC42SE1-204ENST00000483763 GJA8P48165 433 aa9.21□□□□□ -0.94
CDC42SE1-204ENST00000483763 LMAN1P49257 510 aa9.21□□□□□ -0.94
CDC42SE1-204ENST00000483763 RGS19P49795 217 aa9.21□□□□□ -0.94
CDC42SE1-204ENST00000483763 GATMP50440 423 aa9.21□□□□□ -0.94
CDC42SE1-204ENST00000483763 SNX16P57768 344 aa9.21□□□□□ -0.94
CDC42SE1-204ENST00000483763 EIF3EP60228 445 aaKnown RBP9.21□□□□□ -0.94
CDC42SE1-204ENST00000483763 SLC10A2Q12908 348 aaPredicted RBP9.21□□□□□ -0.94
CDC42SE1-204ENST00000483763 MTM1Q13496 603 aa9.21□□□□□ -0.94
CDC42SE1-204ENST00000483763 KYNUQ16719 465 aa9.21□□□□□ -0.94
CDC42SE1-204ENST00000483763 SKIDA1Q1XH10 827 aa9.21□□□□□ -0.94
CDC42SE1-204ENST00000483763 SLC25A52Q3SY17 297 aa9.21□□□□□ -0.94
CDC42SE1-204ENST00000483763 RAB41Q5JT25 222 aa9.21□□□□□ -0.94
CDC42SE1-204ENST00000483763 EFHC1Q5JVL4 640 aa9.21□□□□□ -0.94
CDC42SE1-204ENST00000483763 HP1BP3Q5SSJ5 553 aaPredicted RBP9.21□□□□□ -0.94
CDC42SE1-204ENST00000483763 LRRC8DQ7L1W4 858 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms