RNA–Protein interactions for RNA: ENST00000483723.5

CLK3-204, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 1,749 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-204ENST00000483723 CALCOCO1Q9P1Z2 691 aa14.66□□□□□ -0.06
CLK3-204ENST00000483723 WHRNQ9P202 907 aa14.66□□□□□ -0.06
CLK3-204ENST00000483723 DNPEPQ9ULA0 475 aa14.66□□□□□ -0.06
CLK3-204ENST00000483723 FAN1Q9Y2M0 1017 aa14.66□□□□□ -0.06
CLK3-204ENST00000483723 YJEFN3A6XGL0 299 aa14.65□□□□□ -0.06
CLK3-204ENST00000483723 E7ENQ6 273 aa14.65□□□□□ -0.06
CLK3-204ENST00000483723 TP73O15350 636 aa14.65□□□□□ -0.06
CLK3-204ENST00000483723 EFEMP2O95967 443 aa14.65□□□□□ -0.06
CLK3-204ENST00000483723 ZBED1O96006 694 aa14.65□□□□□ -0.06
CLK3-204ENST00000483723 ITGAVP06756 1048 aa14.65□□□□□ -0.06
CLK3-204ENST00000483723 CAPN2P17655 700 aa14.65□□□□□ -0.06
CLK3-204ENST00000483723 KLRC2P26717 231 aa14.65□□□□□ -0.06
CLK3-204ENST00000483723 L1CAMP32004 1257 aa14.65□□□□□ -0.06
CLK3-204ENST00000483723 VCPP55072 806 aaKnown RBP14.65□□□□□ -0.06
CLK3-204ENST00000483723 BYSLQ13895 437 aaKnown RBP14.65□□□□□ -0.06
CLK3-204ENST00000483723 PPP1R7Q15435 360 aa14.65□□□□□ -0.06
CLK3-204ENST00000483723 DPYSL2Q16555 572 aa14.65□□□□□ -0.06
CLK3-204ENST00000483723 VARS2Q5ST30 1063 aaKnown RBP14.65□□□□□ -0.06
CLK3-204ENST00000483723 SYPL2Q5VXT5 272 aa14.65□□□□□ -0.06
CLK3-204ENST00000483723 FAM149B1Q96BN6 582 aa14.65□□□□□ -0.06
CLK3-204ENST00000483723 PGAP3Q96FM1 320 aaPredicted RBP14.65□□□□□ -0.06
CLK3-204ENST00000483723 GPR62Q9BZJ7 368 aa14.65□□□□□ -0.06
CLK3-204ENST00000483723 RRN3Q9NYV6 651 aa14.65□□□□□ -0.06
CLK3-204ENST00000483723 STAP1Q9ULZ2 295 aa14.65□□□□□ -0.06
CLK3-204ENST00000483723 APOC4-APOC2K7ER74 178 aa14.64□□□□□ -0.07
CLK3-204ENST00000483723 AGPSO00116 658 aa14.64□□□□□ -0.07
CLK3-204ENST00000483723 TNFRSF10BO14763 440 aa14.64□□□□□ -0.07
CLK3-204ENST00000483723 TBC1D4O60343 1298 aa14.64□□□□□ -0.07
CLK3-204ENST00000483723 APOC2P02655 101 aa14.64□□□□□ -0.07
CLK3-204ENST00000483723 CLTBP09497 229 aa14.64□□□□□ -0.07
CLK3-204ENST00000483723 USP17L7P0C7H9 530 aa14.64□□□□□ -0.07
CLK3-204ENST00000483723 ITIH2P19823 946 aa14.64□□□□□ -0.07
CLK3-204ENST00000483723 SULT1E1P49888 294 aa14.64□□□□□ -0.07
CLK3-204ENST00000483723 ATXN1P54253 815 aaKnown RBP14.64□□□□□ -0.07
CLK3-204ENST00000483723 MMRN1Q13201 1228 aa14.64□□□□□ -0.07
CLK3-204ENST00000483723 IKBKEQ14164 716 aa14.64□□□□□ -0.07
CLK3-204ENST00000483723 TFDP2Q14188 446 aa14.64□□□□□ -0.07
CLK3-204ENST00000483723 CA9Q16790 459 aa14.64□□□□□ -0.07
CLK3-204ENST00000483723 DCAF6Q58WW2 860 aa14.64□□□□□ -0.07
CLK3-204ENST00000483723 ZC3H12AQ5D1E8 599 aaKnown RBP14.64□□□□□ -0.07
CLK3-204ENST00000483723 RHBDF2Q6PJF5 856 aa14.64□□□□□ -0.07
CLK3-204ENST00000483723 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.64□□□□□ -0.075e-12■■□□□ 14.3
CLK3-204ENST00000483723 DEFB128Q7Z7B8 93 aa14.64□□□□□ -0.07
CLK3-204ENST00000483723 RFX6Q8HWS3 928 aa14.64□□□□□ -0.07
CLK3-204ENST00000483723 SPATA2LQ8IUW3 424 aaPredicted RBP14.64□□□□□ -0.07
CLK3-204ENST00000483723 ALLCQ8N6M5 410 aa14.64□□□□□ -0.07
CLK3-204ENST00000483723 ACTL9Q8TC94 416 aa14.64□□□□□ -0.07
CLK3-204ENST00000483723 LRRC45Q96CN5 670 aa14.64□□□□□ -0.07
CLK3-204ENST00000483723 FUBP3Q96I24 572 aaKnown RBP eCLIP14.64□□□□□ -0.07
CLK3-204ENST00000483723 SLC9A7Q96T83 725 aa14.64□□□□□ -0.07
CLK3-204ENST00000483723 FAM118BQ9BPY3 351 aa14.64□□□□□ -0.07
CLK3-204ENST00000483723 ZNF670Q9BS34 389 aa14.64□□□□□ -0.07
CLK3-204ENST00000483723 C11orf49Q9H6J7 331 aa14.64□□□□□ -0.07
CLK3-204ENST00000483723 TMEM39AQ9NV64 488 aa14.64□□□□□ -0.07
CLK3-204ENST00000483723 MTMR10Q9NXD2 777 aa14.64□□□□□ -0.07
CLK3-204ENST00000483723 LTBP2Q14767 1821 aa14.64□□□□□ -0.07
CLK3-204ENST00000483723 OR6C75A6NL08 312 aa14.63□□□□□ -0.07
CLK3-204ENST00000483723 TBKBP1A7MCY6 615 aa14.63□□□□□ -0.07
CLK3-204ENST00000483723 PPFIA2O75334 1257 aa14.63□□□□□ -0.07
CLK3-204ENST00000483723 LTFP02788 710 aa14.63□□□□□ -0.07
CLK3-204ENST00000483723 CDR1P51861 262 aa14.63□□□□□ -0.07
CLK3-204ENST00000483723 PLTPP55058 493 aa14.63□□□□□ -0.07
CLK3-204ENST00000483723 PITX1P78337 314 aaPredicted RBP14.63□□□□□ -0.07
CLK3-204ENST00000483723 OTUD4Q01804 1114 aaKnown RBP14.63□□□□□ -0.07
CLK3-204ENST00000483723 ELAVL2Q12926 359 aaKnown RBP14.63□□□□□ -0.07
CLK3-204ENST00000483723 NFE2Q16621 373 aaPredicted RBP14.63□□□□□ -0.07
CLK3-204ENST00000483723 ANKRD20A8PQ5CZ79 823 aa14.63□□□□□ -0.07
CLK3-204ENST00000483723 SPDYCQ5MJ68 293 aa14.63□□□□□ -0.07
CLK3-204ENST00000483723 FAM171A1Q5VUB5 890 aa14.63□□□□□ -0.07
CLK3-204ENST00000483723 SLC9A4Q6AI14 798 aa14.63□□□□□ -0.07
CLK3-204ENST00000483723 PQLC3Q8N755 202 aa14.63□□□□□ -0.07
CLK3-204ENST00000483723 CCDC89Q8N998 374 aa14.63□□□□□ -0.07
CLK3-204ENST00000483723 FBXO25Q8TCJ0 367 aa14.63□□□□□ -0.07
CLK3-204ENST00000483723 PIK3R5Q8WYR1 880 aa14.63□□□□□ -0.07
CLK3-204ENST00000483723 FMO2Q99518 471 aa14.63□□□□□ -0.07
CLK3-204ENST00000483723 CALN1Q9BXU9 219 aa14.63□□□□□ -0.07
CLK3-204ENST00000483723 GPATCH2LQ9NWQ4 482 aa14.63□□□□□ -0.07
CLK3-204ENST00000483723 FZD10Q9ULW2 581 aa14.63□□□□□ -0.07
CLK3-204ENST00000483723 NAALADL1Q9UQQ1 740 aa14.63□□□□□ -0.07
CLK3-204ENST00000483723 ATP11BQ9Y2G3 1177 aa14.63□□□□□ -0.07
CLK3-204ENST00000483723 DGKIO75912 1065 aa14.63□□□□□ -0.07
CLK3-204ENST00000483723 KRT14P02533 472 aa14.63□□□□□ -0.07
CLK3-204ENST00000483723 CYP2F1P24903 491 aa14.63□□□□□ -0.07
CLK3-204ENST00000483723 RDXP35241 583 aaKnown RBP14.63□□□□□ -0.07
CLK3-204ENST00000483723 MAGEA11P43364 429 aa14.63□□□□□ -0.07
CLK3-204ENST00000483723 GPS2Q13227 327 aa14.63□□□□□ -0.07
CLK3-204ENST00000483723 KRT81Q14533 505 aa14.63□□□□□ -0.07
CLK3-204ENST00000483723 LRRC26Q2I0M4 334 aa14.63□□□□□ -0.07
CLK3-204ENST00000483723 FUT10Q6P4F1 479 aa14.63□□□□□ -0.07
CLK3-204ENST00000483723 TMC3Q7Z5M5 1100 aa14.63□□□□□ -0.07
CLK3-204ENST00000483723 LRRC43Q8N309 656 aa14.63□□□□□ -0.07
CLK3-204ENST00000483723 CCDC185Q8N715 623 aa14.63□□□□□ -0.07
CLK3-204ENST00000483723 PCDH19Q8TAB3 1148 aa14.63□□□□□ -0.07
CLK3-204ENST00000483723 CCHCR1Q8TD31 782 aa14.63□□□□□ -0.07
CLK3-204ENST00000483723 SNF8Q96H20 258 aa14.63□□□□□ -0.07
CLK3-204ENST00000483723 PAWRQ96IZ0 340 aaKnown RBP14.63□□□□□ -0.07
CLK3-204ENST00000483723 CCDC114Q96M63 670 aa14.63□□□□□ -0.07
CLK3-204ENST00000483723 MAK16Q9BXY0 300 aaKnown RBP14.63□□□□□ -0.07
CLK3-204ENST00000483723 PRDM16Q9HAZ2 1276 aa14.63□□□□□ -0.07
CLK3-204ENST00000483723 HCSTQ9UBK5 93 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms