RNA–Protein interactions for RNA: ENST00000483631.1

HPS4-213, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 737 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-213ENST00000483631 STIM1Q13586 685 aa20.92■□□□□ 0.94
HPS4-213ENST00000483631 CRY1Q16526 586 aa20.92■□□□□ 0.94
HPS4-213ENST00000483631 PLK5Q496M5 336 aa20.92■□□□□ 0.94
HPS4-213ENST00000483631 C2orf27AQ580R0 203 aa20.92■□□□□ 0.94
HPS4-213ENST00000483631 PPP1R26Q5T8A7 1209 aaPredicted RBP20.92■□□□□ 0.94
HPS4-213ENST00000483631 ARHGAP17Q68EM7 881 aa20.92■□□□□ 0.94
HPS4-213ENST00000483631 FOXR2Q6PJQ5 311 aa20.92■□□□□ 0.94
HPS4-213ENST00000483631 BBS7Q8IWZ6 715 aa20.92■□□□□ 0.94
HPS4-213ENST00000483631 PHTF2Q8N3S3 785 aa20.92■□□□□ 0.94
HPS4-213ENST00000483631 TMEM176AQ96HP8 235 aa20.92■□□□□ 0.94
HPS4-213ENST00000483631 MTPAPQ9NVV4 582 aaKnown RBP eCLIP20.92■□□□□ 0.94
HPS4-213ENST00000483631 POLR3BQ9NW08 1133 aaPredicted RBP20.92■□□□□ 0.94
HPS4-213ENST00000483631 CLIC5Q9NZA1 410 aa20.92■□□□□ 0.94
HPS4-213ENST00000483631 LSM7Q9UK45 103 aaKnown RBP20.92■□□□□ 0.94
HPS4-213ENST00000483631 DYNC1LI1Q9Y6G9 523 aaKnown RBP20.92■□□□□ 0.94
HPS4-213ENST00000483631 NCOR2Q9Y618 2525 aa20.92■□□□□ 0.94
HPS4-213ENST00000483631 SLC30A4O14863 429 aa20.91■□□□□ 0.94
HPS4-213ENST00000483631 CYP26A1O43174 497 aa20.91■□□□□ 0.94
HPS4-213ENST00000483631 RHOBTB1O94844 696 aa20.91■□□□□ 0.94
HPS4-213ENST00000483631 KIR2DL1P43626 348 aaPredicted RBP20.91■□□□□ 0.94
HPS4-213ENST00000483631 PLA2G4AP47712 749 aa20.91■□□□□ 0.94
HPS4-213ENST00000483631 SLC6A11P48066 632 aa20.91■□□□□ 0.94
HPS4-213ENST00000483631 PGFP49763 221 aa20.91■□□□□ 0.94
HPS4-213ENST00000483631 ELF2Q15723 593 aa20.91■□□□□ 0.94
HPS4-213ENST00000483631 EOGTQ5NDL2 527 aa20.91■□□□□ 0.94
HPS4-213ENST00000483631 ANKRD40Q6AI12 368 aa20.91■□□□□ 0.94
HPS4-213ENST00000483631 C12orf40Q86WS4 652 aa20.91■□□□□ 0.94
HPS4-213ENST00000483631 SLC4A11Q8NBS3 891 aa20.91■□□□□ 0.94
HPS4-213ENST00000483631 EEF2KMTQ96G04 330 aa20.91■□□□□ 0.94
HPS4-213ENST00000483631 DHTKD1Q96HY7 919 aaPredicted RBP20.91■□□□□ 0.94
HPS4-213ENST00000483631 HEXIM2Q96MH2 286 aaKnown RBP20.91■□□□□ 0.94
HPS4-213ENST00000483631 METTL14Q9HCE5 456 aaKnown RBP20.91■□□□□ 0.94
HPS4-213ENST00000483631 OSER1Q9NX31 292 aa20.91■□□□□ 0.94
HPS4-213ENST00000483631 MARK1Q9P0L2 795 aa20.91■□□□□ 0.94
HPS4-213ENST00000483631 DEC1Q9P2X7 70 aa20.91■□□□□ 0.94
HPS4-213ENST00000483631 ARMCX3Q9UH62 379 aaPredicted RBP20.91■□□□□ 0.94
HPS4-213ENST00000483631 DNMT3LQ9UJW3 386 aa20.91■□□□□ 0.94
HPS4-213ENST00000483631 ABCA7Q8IZY2 2146 aa20.9■□□□□ 0.94
HPS4-213ENST00000483631 NUP205Q92621 2012 aa20.9■□□□□ 0.94
HPS4-213ENST00000483631 PLXND1Q9Y4D7 1925 aa20.9■□□□□ 0.94
HPS4-213ENST00000483631 PSMA7O14818 248 aa20.9■□□□□ 0.94
HPS4-213ENST00000483631 SCAMP3O14828 347 aaKnown RBP20.9■□□□□ 0.94
HPS4-213ENST00000483631 PMM2O15305 246 aa20.9■□□□□ 0.94
HPS4-213ENST00000483631 ALDH1A2O94788 518 aa20.9■□□□□ 0.94
HPS4-213ENST00000483631 RALAP11233 206 aa20.9■□□□□ 0.94
HPS4-213ENST00000483631 RARGP13631 454 aa20.9■□□□□ 0.94
HPS4-213ENST00000483631 LIMK1P53667 647 aa20.9■□□□□ 0.94
HPS4-213ENST00000483631 RAD23BP54727 409 aa20.9■□□□□ 0.94
HPS4-213ENST00000483631 SEC13P55735 322 aa20.9■□□□□ 0.94
HPS4-213ENST00000483631 SLC8A3P57103 927 aa20.9■□□□□ 0.94
HPS4-213ENST00000483631 YWHAEP62258 255 aaKnown RBP20.9■□□□□ 0.94
HPS4-213ENST00000483631 USP39Q53GS9 565 aaKnown RBP20.9■□□□□ 0.94
HPS4-213ENST00000483631 PLA2G2CQ5R387 149 aa20.9■□□□□ 0.94
HPS4-213ENST00000483631 TCERG1LQ5VWI1 586 aa20.9■□□□□ 0.94
HPS4-213ENST00000483631 TRMT11Q7Z4G4 463 aaKnown RBP20.9■□□□□ 0.94
HPS4-213ENST00000483631 ARHGAP18Q8N392 663 aa20.9■□□□□ 0.94
HPS4-213ENST00000483631 IL17RCQ8NAC3 791 aa20.9■□□□□ 0.94
HPS4-213ENST00000483631 CEP63Q96MT8 703 aa20.9■□□□□ 0.94
HPS4-213ENST00000483631 DUSP15Q9H1R2 295 aaPredicted RBP20.9■□□□□ 0.94
HPS4-213ENST00000483631 ARRDC1-AS1Q9H2J1 176 aa20.9■□□□□ 0.94
HPS4-213ENST00000483631 WDR35Q9P2L0 1181 aa20.9■□□□□ 0.94
HPS4-213ENST00000483631 ZNF510Q9Y2H8 683 aa20.9■□□□□ 0.94
HPS4-213ENST00000483631 CNOT1A5YKK6 2376 aaKnown RBP20.9■□□□□ 0.94
HPS4-213ENST00000483631 A0A1W2PQH9 124 aa20.89■□□□□ 0.93
HPS4-213ENST00000483631 TULP3O75386 442 aa20.89■□□□□ 0.93
HPS4-213ENST00000483631 TBX18O95935 607 aa20.89■□□□□ 0.93
HPS4-213ENST00000483631 CBWD6Q4V339 395 aa20.89■□□□□ 0.93
HPS4-213ENST00000483631 ZNF394Q53GI3 561 aa20.89■□□□□ 0.93
HPS4-213ENST00000483631 DCAF17Q5H9S7 520 aaPredicted RBP20.89■□□□□ 0.93
HPS4-213ENST00000483631 RAB41Q5JT25 222 aa20.89■□□□□ 0.93
HPS4-213ENST00000483631 CBWD3Q5JTY5 395 aa20.89■□□□□ 0.93
HPS4-213ENST00000483631 CBWD5Q5RIA9 395 aa20.89■□□□□ 0.93
HPS4-213ENST00000483631 TMEM25Q86YD3 366 aa20.89■□□□□ 0.93
HPS4-213ENST00000483631 ANKRD52Q8NB46 1076 aa20.89■□□□□ 0.93
HPS4-213ENST00000483631 SLC35C1Q96A29 364 aa20.89■□□□□ 0.93
HPS4-213ENST00000483631 NMUR1Q9HB89 426 aa20.89■□□□□ 0.93
HPS4-213ENST00000483631 NAGPAQ9UK23 515 aa20.89■□□□□ 0.93
HPS4-213ENST00000483631 STARD13Q9Y3M8 1113 aa20.89■□□□□ 0.93
HPS4-213ENST00000483631 THADAQ6YHU6 1953 aa20.88■□□□□ 0.93
HPS4-213ENST00000483631 MED19A0JLT2 244 aaPredicted RBP20.88■□□□□ 0.93
HPS4-213ENST00000483631 CACNG3O60359 315 aa20.88■□□□□ 0.93
HPS4-213ENST00000483631 IRF1P10914 325 aa20.88■□□□□ 0.93
HPS4-213ENST00000483631 TBXAS1P24557 533 aaPredicted RBP20.88■□□□□ 0.93
HPS4-213ENST00000483631 PMS1P54277 932 aaKnown RBP20.88■□□□□ 0.93
HPS4-213ENST00000483631 MESP2Q0VG99 397 aa20.88■□□□□ 0.93
HPS4-213ENST00000483631 CUL2Q13617 745 aa20.88■□□□□ 0.93
HPS4-213ENST00000483631 ANO4Q32M45 955 aa20.88■□□□□ 0.93
HPS4-213ENST00000483631 SCD5Q86SK9 330 aa20.88■□□□□ 0.93
HPS4-213ENST00000483631 ALLCQ8N6M5 410 aa20.88■□□□□ 0.93
HPS4-213ENST00000483631 TERB1Q8NA31 727 aa20.88■□□□□ 0.93
HPS4-213ENST00000483631 TXNDC5Q8NBS9 432 aaKnown RBP20.88■□□□□ 0.93
HPS4-213ENST00000483631 DDX1Q92499 740 aaKnown RBP20.88■□□□□ 0.93
HPS4-213ENST00000483631 TATDN2Q93075 761 aa20.88■□□□□ 0.93
HPS4-213ENST00000483631 WBP2Q969T9 261 aa20.88■□□□□ 0.93
HPS4-213ENST00000483631 JAKMIP2Q96AA8 810 aa20.88■□□□□ 0.93
HPS4-213ENST00000483631 XPO6Q96QU8 1125 aaKnown RBP20.88■□□□□ 0.93
HPS4-213ENST00000483631 POLMQ9NP87 494 aaPredicted RBP20.88■□□□□ 0.93
HPS4-213ENST00000483631 VPS45Q9NRW7 570 aa20.88■□□□□ 0.93
HPS4-213ENST00000483631 LOC105378220A0A1B0GUY1 285 aaPredicted RBP20.87■□□□□ 0.93
HPS4-213ENST00000483631 TBC1D3BA6NDS4 549 aa20.87■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms