RNA–Protein interactions for RNA: ENST00000483275.1

VARS-226, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 450 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-226ENST00000483275 BAHCC1Q9P281 2608 aa14.73□□□□□ -0.05
VARS-226ENST00000483275 PALM2-AKAP2B1ALY0 433 aaPredicted RBP14.72□□□□□ -0.05
VARS-226ENST00000483275 HOXC11O43248 304 aaPredicted RBP14.72□□□□□ -0.05
VARS-226ENST00000483275 TLR5O60602 858 aa14.72□□□□□ -0.05
VARS-226ENST00000483275 YEATS4O95619 227 aa14.72□□□□□ -0.05
VARS-226ENST00000483275 HOXB2P14652 356 aa14.72□□□□□ -0.05
VARS-226ENST00000483275 ATICP31939 592 aa14.72□□□□□ -0.05
VARS-226ENST00000483275 TNFRSF4P43489 277 aa14.72□□□□□ -0.05
VARS-226ENST00000483275 NDST1P52848 882 aa14.72□□□□□ -0.05
VARS-226ENST00000483275 RPL6Q02878 288 aaKnown RBP14.72□□□□□ -0.05
VARS-226ENST00000483275 GAD2Q05329 585 aa14.72□□□□□ -0.05
VARS-226ENST00000483275 KNOP1Q1ED39 458 aaKnown RBP14.72□□□□□ -0.05
VARS-226ENST00000483275 BTBD8Q5XKL5 378 aa14.72□□□□□ -0.05
VARS-226ENST00000483275 TPGS1Q6ZTW0 290 aa14.72□□□□□ -0.05
VARS-226ENST00000483275 SYT12Q8IV01 421 aa14.72□□□□□ -0.05
VARS-226ENST00000483275 C12orf56Q8IXR9 622 aa14.72□□□□□ -0.05
VARS-226ENST00000483275 KIAA0895Q8NCT3 520 aa14.72□□□□□ -0.05
VARS-226ENST00000483275 OVCA2Q8WZ82 227 aa14.72□□□□□ -0.05
VARS-226ENST00000483275 P2RY11Q96G91 374 aa14.72□□□□□ -0.05
VARS-226ENST00000483275 SCNM1Q9BWG6 230 aa14.72□□□□□ -0.05
VARS-226ENST00000483275 TMEM121BQ9BXQ6 578 aaPredicted RBP14.72□□□□□ -0.05
VARS-226ENST00000483275 ADAM33Q9BZ11 813 aa14.72□□□□□ -0.05
VARS-226ENST00000483275 SPHK2Q9NRA0 654 aa14.72□□□□□ -0.05
VARS-226ENST00000483275 OSER1Q9NX31 292 aa14.72□□□□□ -0.05
VARS-226ENST00000483275 DEC1Q9P2X7 70 aa14.72□□□□□ -0.05
VARS-226ENST00000483275 EVLQ9UI08 416 aaPredicted RBP14.72□□□□□ -0.05
VARS-226ENST00000483275 RAD54BQ9Y620 910 aa14.72□□□□□ -0.05
VARS-226ENST00000483275 A0A1W2PQF6 199 aa14.71□□□□□ -0.05
VARS-226ENST00000483275 HYAL3O43820 417 aaPredicted RBP14.71□□□□□ -0.05
VARS-226ENST00000483275 GREM1O60565 184 aa14.71□□□□□ -0.05
VARS-226ENST00000483275 C4BPAP04003 597 aaKnown RBP14.71□□□□□ -0.05
VARS-226ENST00000483275 ZDHHC11BP0C7U3 371 aa14.71□□□□□ -0.05
VARS-226ENST00000483275 CSRP1P21291 193 aaKnown RBP14.71□□□□□ -0.05
VARS-226ENST00000483275 ME1P48163 572 aa14.71□□□□□ -0.05
VARS-226ENST00000483275 KIAA1958Q8N8K9 716 aa14.71□□□□□ -0.05
VARS-226ENST00000483275 PARD3BQ8TEW8 1205 aa14.71□□□□□ -0.05
VARS-226ENST00000483275 TWNKQ96RR1 684 aa14.71□□□□□ -0.05
VARS-226ENST00000483275 NUSAP1Q9BXS6 441 aaKnown RBP14.71□□□□□ -0.05
VARS-226ENST00000483275 IL37Q9NZH6 218 aa14.71□□□□□ -0.05
VARS-226ENST00000483275 SERTAD1Q9UHV2 236 aa14.71□□□□□ -0.05
VARS-226ENST00000483275 PILRBQ9UKJ0 227 aa14.71□□□□□ -0.05
VARS-226ENST00000483275 CYP8B1Q9UNU6 501 aa14.71□□□□□ -0.05
VARS-226ENST00000483275 A0A0A0MRY4 1105 aa14.7□□□□□ -0.06
VARS-226ENST00000483275 KLRC4O43908 158 aa14.7□□□□□ -0.06
VARS-226ENST00000483275 CEACAM1P13688 526 aa14.7□□□□□ -0.06
VARS-226ENST00000483275 TYRP14679 529 aa14.7□□□□□ -0.06
VARS-226ENST00000483275 NDUFV2P19404 249 aa14.7□□□□□ -0.06
VARS-226ENST00000483275 PIK3CAP42336 1068 aa14.7□□□□□ -0.06
VARS-226ENST00000483275 ASPAP45381 313 aa14.7□□□□□ -0.06
VARS-226ENST00000483275 TUBP50607 506 aa14.7□□□□□ -0.06
VARS-226ENST00000483275 FAM193AP78312 1265 aa14.7□□□□□ -0.06
VARS-226ENST00000483275 LMAN2Q12907 356 aa14.7□□□□□ -0.06
VARS-226ENST00000483275 STK4Q13043 487 aa14.7□□□□□ -0.06
VARS-226ENST00000483275 PKP1Q13835 747 aa14.7□□□□□ -0.06
VARS-226ENST00000483275 HSF5Q4G112 596 aaPredicted RBP14.7□□□□□ -0.06
VARS-226ENST00000483275 SNX30Q5VWJ9 437 aa14.7□□□□□ -0.06
VARS-226ENST00000483275 RESP18Q5W5W9 173 aa14.7□□□□□ -0.06
VARS-226ENST00000483275 GRAMD4Q6IC98 578 aa14.7□□□□□ -0.06
VARS-226ENST00000483275 OTUB2Q96DC9 234 aa14.7□□□□□ -0.06
VARS-226ENST00000483275 TNIP3Q96KP6 325 aa14.7□□□□□ -0.06
VARS-226ENST00000483275 BBS2Q9BXC9 721 aa14.7□□□□□ -0.06
VARS-226ENST00000483275 KLF16Q9BXK1 252 aaPredicted RBP14.7□□□□□ -0.06
VARS-226ENST00000483275 VRTNQ9H8Y1 702 aa14.7□□□□□ -0.06
VARS-226ENST00000483275 MAGEF1Q9HAY2 307 aa14.7□□□□□ -0.06
VARS-226ENST00000483275 NMUR1Q9HB89 426 aa14.7□□□□□ -0.06
VARS-226ENST00000483275 CACNA2D2Q9NY47 1150 aa14.7□□□□□ -0.06
VARS-226ENST00000483275 PLK2Q9NYY3 685 aa14.7□□□□□ -0.06
VARS-226ENST00000483275 KLK13Q9UKR3 277 aa14.7□□□□□ -0.06
VARS-226ENST00000483275 PCDHA7Q9UN72 937 aa14.7□□□□□ -0.06
VARS-226ENST00000483275 IGHV1OR15-9A0A0B4J2B8 117 aa14.69□□□□□ -0.06
VARS-226ENST00000483275 A0A1W2PQH9 124 aa14.69□□□□□ -0.06
VARS-226ENST00000483275 FAM92AA1XBS5 289 aa14.69□□□□□ -0.06
VARS-226ENST00000483275 PRRT4C9JH25 899 aa14.69□□□□□ -0.06
VARS-226ENST00000483275 NR3C1P04150 777 aa14.69□□□□□ -0.06
VARS-226ENST00000483275 FAM163BP0C2L3 166 aa14.69□□□□□ -0.06
VARS-226ENST00000483275 TRIM49P0CI25 452 aa14.69□□□□□ -0.06
VARS-226ENST00000483275 TRIM49CP0CI26 452 aa14.69□□□□□ -0.06
VARS-226ENST00000483275 NTSR1P30989 418 aa14.69□□□□□ -0.06
VARS-226ENST00000483275 SNRPFP62306 86 aaKnown RBP14.69□□□□□ -0.06
VARS-226ENST00000483275 SIM1P81133 766 aaPredicted RBP14.69□□□□□ -0.06
VARS-226ENST00000483275 C1orf220Q5T0J3 134 aa14.69□□□□□ -0.06
VARS-226ENST00000483275 CEP135Q66GS9 1140 aa14.69□□□□□ -0.06
VARS-226ENST00000483275 SLC41A1Q8IVJ1 513 aa14.69□□□□□ -0.06
VARS-226ENST00000483275 CHPFQ8IZ52 775 aa14.69□□□□□ -0.06
VARS-226ENST00000483275 GATA6Q92908 595 aa14.69□□□□□ -0.06
VARS-226ENST00000483275 HSPA12BQ96MM6 686 aa14.69□□□□□ -0.06
VARS-226ENST00000483275 BACH2Q9BYV9 841 aa14.69□□□□□ -0.06
VARS-226ENST00000483275 EXOC1Q9NV70 894 aa14.69□□□□□ -0.06
VARS-226ENST00000483275 WASH3PC4AMC7 463 aa14.68□□□□□ -0.06
VARS-226ENST00000483275 HHLA1C9JL84 531 aa14.68□□□□□ -0.06
VARS-226ENST00000483275 AP5Z1O43299 807 aa14.68□□□□□ -0.06
VARS-226ENST00000483275 ACTN4O43707 911 aaKnown RBP14.68□□□□□ -0.06
VARS-226ENST00000483275 CACNG3O60359 315 aa14.68□□□□□ -0.06
VARS-226ENST00000483275 HLA-DRAP01903 254 aa14.68□□□□□ -0.06
VARS-226ENST00000483275 FAM200BP0CF97 657 aa14.68□□□□□ -0.06
VARS-226ENST00000483275 CD58P19256 250 aa14.68□□□□□ -0.06
VARS-226ENST00000483275 CLDN10P78369 228 aa14.68□□□□□ -0.06
VARS-226ENST00000483275 ZACNQ401N2 412 aa14.68□□□□□ -0.06
VARS-226ENST00000483275 KMT5BQ4FZB7 885 aa14.68□□□□□ -0.06
VARS-226ENST00000483275 SLC23A3Q6PIS1 610 aa14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms