RNA–Protein interactions for RNA: ENST00000482878.5

CCDC78-213, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 3,458 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-213ENST00000482878 SMIM31A0A1B0GVY4 71 aa12.89□□□□□ -0.35
CCDC78-213ENST00000482878 LDHAP00338 332 aaKnown RBP12.89□□□□□ -0.35
CCDC78-213ENST00000482878 WEE2P0C1S8 567 aa12.89□□□□□ -0.35
CCDC78-213ENST00000482878 SP2Q02086 613 aa12.89□□□□□ -0.35
CCDC78-213ENST00000482878 SLC25A11Q02978 314 aaKnown RBP12.89□□□□□ -0.35
CCDC78-213ENST00000482878 DCTN2Q13561 401 aaKnown RBP12.89□□□□□ -0.35
CCDC78-213ENST00000482878 IGDCC3Q8IVU1 814 aa12.89□□□□□ -0.35
CCDC78-213ENST00000482878 UNC45BQ8IWX7 931 aa12.89□□□□□ -0.35
CCDC78-213ENST00000482878 PALM2Q8IXS6 379 aa12.89□□□□□ -0.35
CCDC78-213ENST00000482878 IMPG2Q9BZV3 1241 aa12.89□□□□□ -0.35
CCDC78-213ENST00000482878 MTMR12Q9C0I1 747 aa12.89□□□□□ -0.35
CCDC78-213ENST00000482878 HACL1Q9UJ83 578 aa12.89□□□□□ -0.35
CCDC78-213ENST00000482878 ADCY3O60266 1144 aa12.89□□□□□ -0.35
CCDC78-213ENST00000482878 DNAJC6O75061 913 aa12.89□□□□□ -0.35
CCDC78-213ENST00000482878 LSM8O95777 96 aaKnown RBP12.89□□□□□ -0.35
CCDC78-213ENST00000482878 NAMPTP43490 491 aa12.89□□□□□ -0.35
CCDC78-213ENST00000482878 TGFB2P61812 414 aa12.89□□□□□ -0.35
CCDC78-213ENST00000482878 GRAMD1BQ3KR37 738 aa12.89□□□□□ -0.35
CCDC78-213ENST00000482878 GADL1Q6ZQY3 521 aa12.89□□□□□ -0.35
CCDC78-213ENST00000482878 RAPH1Q70E73 1250 aa12.89□□□□□ -0.35
CCDC78-213ENST00000482878 NIPA2Q8N8Q9 360 aa12.89□□□□□ -0.35
CCDC78-213ENST00000482878 OR6Y1Q8NGX8 325 aa12.89□□□□□ -0.35
CCDC78-213ENST00000482878 JOSD2Q8TAC2 188 aa12.89□□□□□ -0.35
CCDC78-213ENST00000482878 VPS11Q9H270 941 aa12.89□□□□□ -0.35
CCDC78-213ENST00000482878 PDE4DIPQ5VU43 2346 aa12.89□□□□□ -0.35
CCDC78-213ENST00000482878 COL4A5P29400 1685 aa12.88□□□□□ -0.35
CCDC78-213ENST00000482878 E7ESA3 106 aa12.88□□□□□ -0.35
CCDC78-213ENST00000482878 TM9SF1O15321 606 aa12.88□□□□□ -0.35
CCDC78-213ENST00000482878 LRCH4O75427 683 aa12.88□□□□□ -0.35
CCDC78-213ENST00000482878 PSMA2P25787 234 aa12.88□□□□□ -0.35
CCDC78-213ENST00000482878 GRIA2P42262 883 aa12.88□□□□□ -0.35
CCDC78-213ENST00000482878 CD151P48509 253 aa12.88□□□□□ -0.35
CCDC78-213ENST00000482878 PLOD1Q02809 727 aaPredicted RBP12.88□□□□□ -0.35
CCDC78-213ENST00000482878 ASPHQ12797 758 aa12.88□□□□□ -0.35
CCDC78-213ENST00000482878 KLHL38Q2WGJ6 581 aa12.88□□□□□ -0.35
CCDC78-213ENST00000482878 TTC7BQ86TV6 843 aa12.88□□□□□ -0.35
CCDC78-213ENST00000482878 NSUN6Q8TEA1 469 aaKnown RBP12.88□□□□□ -0.35
CCDC78-213ENST00000482878 RSAD2Q8WXG1 361 aa12.88□□□□□ -0.35
CCDC78-213ENST00000482878 DGCR14Q96DF8 476 aaKnown RBP12.88□□□□□ -0.35
CCDC78-213ENST00000482878 MTBPQ96DY7 904 aa12.88□□□□□ -0.35
CCDC78-213ENST00000482878 PTCD3Q96EY7 689 aaKnown RBP12.88□□□□□ -0.35
CCDC78-213ENST00000482878 KCNK13Q9HB14 408 aa12.88□□□□□ -0.35
CCDC78-213ENST00000482878 PCDH18Q9HCL0 1135 aa12.88□□□□□ -0.35
CCDC78-213ENST00000482878 GINM1Q9NU53 330 aa12.88□□□□□ -0.35
CCDC78-213ENST00000482878 PTTG2Q9NZH5 202 aa12.88□□□□□ -0.35
CCDC78-213ENST00000482878 A8MXQ7 604 aa12.88□□□□□ -0.35
CCDC78-213ENST00000482878 SUPT20HL2P0C7V6 817 aa12.88□□□□□ -0.35
CCDC78-213ENST00000482878 ARL2P36404 184 aa12.88□□□□□ -0.35
CCDC78-213ENST00000482878 SUPT20HL1Q3ZLR7 823 aa12.88□□□□□ -0.35
CCDC78-213ENST00000482878 SYCP2LQ5T4T6 812 aa12.88□□□□□ -0.35
CCDC78-213ENST00000482878 LPCAT4Q643R3 524 aa12.88□□□□□ -0.35
CCDC78-213ENST00000482878 C1orf228Q6PIY5 440 aa12.88□□□□□ -0.35
CCDC78-213ENST00000482878 SCARA5Q6ZMJ2 495 aa12.88□□□□□ -0.35
CCDC78-213ENST00000482878 ACAD11Q709F0 780 aa12.88□□□□□ -0.35
CCDC78-213ENST00000482878 FAM71DQ8N9W8 422 aa12.88□□□□□ -0.35
CCDC78-213ENST00000482878 ABHD8Q96I13 439 aa12.88□□□□□ -0.35
CCDC78-213ENST00000482878 SERAC1Q96JX3 654 aa12.88□□□□□ -0.35
CCDC78-213ENST00000482878 TSSK1BQ9BXA7 367 aa12.88□□□□□ -0.35
CCDC78-213ENST00000482878 DHX33Q9H6R0 707 aaKnown RBP12.88□□□□□ -0.35
CCDC78-213ENST00000482878 SMYD3Q9H7B4 428 aa12.88□□□□□ -0.35
CCDC78-213ENST00000482878 XPO7Q9UIA9 1087 aaKnown RBP12.88□□□□□ -0.35
CCDC78-213ENST00000482878 PPM1HQ9ULR3 514 aa12.88□□□□□ -0.35
CCDC78-213ENST00000482878 SERPINB8P50452 374 aa12.87□□□□□ -0.35
CCDC78-213ENST00000482878 CCR3P51677 355 aa12.87□□□□□ -0.35
CCDC78-213ENST00000482878 KCTD21Q4G0X4 260 aa12.87□□□□□ -0.35
CCDC78-213ENST00000482878 PTPN20Q4JDL3 420 aa12.87□□□□□ -0.35
CCDC78-213ENST00000482878 CDR2LQ86X02 465 aaPredicted RBP12.87□□□□□ -0.35
CCDC78-213ENST00000482878 MTMR14Q8NCE2 650 aa12.87□□□□□ -0.35
CCDC78-213ENST00000482878 PIP4K2CQ8TBX8 421 aa12.87□□□□□ -0.35
CCDC78-213ENST00000482878 GRIP2Q9C0E4 1043 aa12.87□□□□□ -0.35
CCDC78-213ENST00000482878 SPATA7Q9P0W8 599 aa12.87□□□□□ -0.35
CCDC78-213ENST00000482878 NDC80O14777 642 aa12.87□□□□□ -0.35
CCDC78-213ENST00000482878 LPXNO60711 386 aa12.87□□□□□ -0.35
CCDC78-213ENST00000482878 TAF5Q15542 800 aa12.87□□□□□ -0.35
CCDC78-213ENST00000482878 DENND1BQ6P3S1 775 aa12.87□□□□□ -0.35
CCDC78-213ENST00000482878 BBS12Q6ZW61 710 aa12.87□□□□□ -0.35
CCDC78-213ENST00000482878 POLNQ7Z5Q5 900 aa12.87□□□□□ -0.35
CCDC78-213ENST00000482878 ZBTB33Q86T24 672 aa12.87□□□□□ -0.35
CCDC78-213ENST00000482878 EMC1Q8N766 993 aa12.87□□□□□ -0.35
CCDC78-213ENST00000482878 SLC26A7Q8TE54 656 aa12.87□□□□□ -0.35
CCDC78-213ENST00000482878 PYDC1Q8WXC3 89 aa12.87□□□□□ -0.35
CCDC78-213ENST00000482878 TMEM120AQ9BXJ8 343 aa12.87□□□□□ -0.35
CCDC78-213ENST00000482878 DDX43Q9NXZ2 648 aaKnown RBP12.87□□□□□ -0.35
CCDC78-213ENST00000482878 CYTH4Q9UIA0 394 aa12.87□□□□□ -0.35
CCDC78-213ENST00000482878 RGPD3A6NKT7 1758 aaPredicted RBP12.87□□□□□ -0.35
CCDC78-213ENST00000482878 RGPD4Q7Z3J3 1758 aa12.87□□□□□ -0.35
CCDC78-213ENST00000482878 TMEM221A6NGB7 291 aa12.87□□□□□ -0.35
CCDC78-213ENST00000482878 STAM2O75886 525 aa12.87□□□□□ -0.35
CCDC78-213ENST00000482878 PAX3P23760 479 aa12.87□□□□□ -0.35
CCDC78-213ENST00000482878 KDELR1P24390 212 aa12.87□□□□□ -0.35
CCDC78-213ENST00000482878 YY1P25490 414 aa12.87□□□□□ -0.35
CCDC78-213ENST00000482878 SERPINB6P35237 376 aa12.87□□□□□ -0.35
CCDC78-213ENST00000482878 IGBP1P78318 339 aa12.87□□□□□ -0.35
CCDC78-213ENST00000482878 BASP1P80723 227 aaKnown RBP12.87□□□□□ -0.35
CCDC78-213ENST00000482878 TAP1Q03518 808 aa12.87□□□□□ -0.35
CCDC78-213ENST00000482878 TNFAIP1Q13829 316 aa12.87□□□□□ -0.35
CCDC78-213ENST00000482878 HSP90AA5PQ58FG0 334 aa12.87□□□□□ -0.35
CCDC78-213ENST00000482878 PDIK1LQ8N165 341 aa12.87□□□□□ -0.35
CCDC78-213ENST00000482878 ZBED3Q96IU2 234 aaPredicted RBP12.87□□□□□ -0.35
CCDC78-213ENST00000482878 TEPSINQ96N21 525 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms