RNA–Protein interactions for RNA: ENST00000482632.5

SPTLC1-206, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 5

Gene SPTLC1, Length 837 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-206ENST00000482632 LIMA1Q9UHB6 759 aaKnown RBP10.52□□□□□ -0.73
SPTLC1-206ENST00000482632 NUDT5Q9UKK9 219 aa10.52□□□□□ -0.73
SPTLC1-206ENST00000482632 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.52□□□□□ -0.73
SPTLC1-206ENST00000482632 SCML2Q9UQR0 700 aa10.52□□□□□ -0.73
SPTLC1-206ENST00000482632 MYOFQ9NZM1 2061 aa10.52□□□□□ -0.73
SPTLC1-206ENST00000482632 KMT2EQ8IZD2 1858 aa10.51□□□□□ -0.73
SPTLC1-206ENST00000482632 KRBA1A5PL33 1030 aa10.51□□□□□ -0.73
SPTLC1-206ENST00000482632 LGALS16A8MUM7 142 aa10.51□□□□□ -0.73
SPTLC1-206ENST00000482632 MDM4O15151 490 aa10.51□□□□□ -0.73
SPTLC1-206ENST00000482632 CHADO15335 359 aa10.51□□□□□ -0.73
SPTLC1-206ENST00000482632 COCHO43405 550 aa10.51□□□□□ -0.73
SPTLC1-206ENST00000482632 TLR5O60602 858 aa10.51□□□□□ -0.73
SPTLC1-206ENST00000482632 SERPINC1P01008 464 aa10.51□□□□□ -0.73
SPTLC1-206ENST00000482632 CD72P21854 359 aa10.51□□□□□ -0.73
SPTLC1-206ENST00000482632 KIF11P52732 1056 aa10.51□□□□□ -0.73
SPTLC1-206ENST00000482632 ZNF132P52740 706 aa10.51□□□□□ -0.73
SPTLC1-206ENST00000482632 PTK2Q05397 1052 aa10.51□□□□□ -0.73
SPTLC1-206ENST00000482632 MTF1Q14872 753 aa10.51□□□□□ -0.73
SPTLC1-206ENST00000482632 CNGA2Q16280 664 aa10.51□□□□□ -0.73
SPTLC1-206ENST00000482632 TAF3Q5VWG9 929 aa10.51□□□□□ -0.73
SPTLC1-206ENST00000482632 TRIM68Q6AZZ1 485 aa10.51□□□□□ -0.73
SPTLC1-206ENST00000482632 DENND1BQ6P3S1 775 aa10.51□□□□□ -0.73
SPTLC1-206ENST00000482632 LCLAT1Q6UWP7 414 aa10.51□□□□□ -0.73
SPTLC1-206ENST00000482632 PASD1Q8IV76 773 aa10.51□□□□□ -0.73
SPTLC1-206ENST00000482632 FBXL6Q8N531 539 aa10.51□□□□□ -0.73
SPTLC1-206ENST00000482632 SHC3Q92529 594 aa10.51□□□□□ -0.73
SPTLC1-206ENST00000482632 NDRG1Q92597 394 aaKnown RBP10.51□□□□□ -0.73
SPTLC1-206ENST00000482632 SHDQ96IW2 340 aa10.51□□□□□ -0.73
SPTLC1-206ENST00000482632 LRRC3BQ96PB8 259 aa10.51□□□□□ -0.73
SPTLC1-206ENST00000482632 SPAG5Q96R06 1193 aa10.51□□□□□ -0.73
SPTLC1-206ENST00000482632 BPIFA3Q9BQP9 254 aa10.51□□□□□ -0.73
SPTLC1-206ENST00000482632 FUCA2Q9BTY2 467 aa10.51□□□□□ -0.73
SPTLC1-206ENST00000482632 MIS12Q9H081 205 aa10.51□□□□□ -0.73
SPTLC1-206ENST00000482632 RNF38Q9H0F5 515 aa10.51□□□□□ -0.73
SPTLC1-206ENST00000482632 EBF3Q9H4W6 596 aa10.51□□□□□ -0.73
SPTLC1-206ENST00000482632 GKN1Q9NS71 199 aa10.51□□□□□ -0.73
SPTLC1-206ENST00000482632 OBP2AQ9NY56 170 aa10.51□□□□□ -0.73
SPTLC1-206ENST00000482632 CFAP97Q9P2B7 532 aa10.51□□□□□ -0.73
SPTLC1-206ENST00000482632 WNT16Q9UBV4 365 aa10.51□□□□□ -0.73
SPTLC1-206ENST00000482632 RASAL2Q9UJF2 1139 aa10.51□□□□□ -0.73
SPTLC1-206ENST00000482632 NDRG2Q9UN36 371 aaKnown RBP10.51□□□□□ -0.73
SPTLC1-206ENST00000482632 SH3BP1Q9Y3L3 701 aa10.51□□□□□ -0.73
SPTLC1-206ENST00000482632 WNT6Q9Y6F9 365 aa10.51□□□□□ -0.73
SPTLC1-206ENST00000482632 ATG2BQ96BY7 2078 aa10.51□□□□□ -0.73
SPTLC1-206ENST00000482632 COL4A2P08572 1712 aa10.5□□□□□ -0.73
SPTLC1-206ENST00000482632 LEFTY2O00292 366 aa10.5□□□□□ -0.73
SPTLC1-206ENST00000482632 FOXN3O00409 490 aaPredicted RBP10.5□□□□□ -0.73
SPTLC1-206ENST00000482632 TBX18O95935 607 aa10.5□□□□□ -0.73
SPTLC1-206ENST00000482632 ZBED1O96006 694 aa10.5□□□□□ -0.73
SPTLC1-206ENST00000482632 OAS1P00973 400 aaKnown RBP10.5□□□□□ -0.73
SPTLC1-206ENST00000482632 HMBSP08397 361 aa10.5□□□□□ -0.73
SPTLC1-206ENST00000482632 RARGP13631 454 aa10.5□□□□□ -0.73
SPTLC1-206ENST00000482632 ARSAP15289 507 aa10.5□□□□□ -0.73
SPTLC1-206ENST00000482632 UCHL3P15374 230 aa10.5□□□□□ -0.73
SPTLC1-206ENST00000482632 ZNF18P17022 549 aa10.5□□□□□ -0.73
SPTLC1-206ENST00000482632 KRT9P35527 623 aa10.5□□□□□ -0.73
SPTLC1-206ENST00000482632 PLA2G4AP47712 749 aa10.5□□□□□ -0.73
SPTLC1-206ENST00000482632 SOX9P48436 509 aa10.5□□□□□ -0.73
SPTLC1-206ENST00000482632 PGFP49763 221 aa10.5□□□□□ -0.73
SPTLC1-206ENST00000482632 YWHAGP61981 247 aaKnown RBP eCLIP10.5□□□□□ -0.73
SPTLC1-206ENST00000482632 TNK2Q07912 1038 aa10.5□□□□□ -0.73
SPTLC1-206ENST00000482632 GOLGA8FQ08AF8 430 aa10.5□□□□□ -0.73
SPTLC1-206ENST00000482632 GOLGA8DPQ0D2H9 430 aa10.5□□□□□ -0.73
SPTLC1-206ENST00000482632 USP4Q13107 963 aa10.5□□□□□ -0.73
SPTLC1-206ENST00000482632 ZNF268Q14587 947 aaPredicted RBP10.5□□□□□ -0.73
SPTLC1-206ENST00000482632 ZNF77Q15935 545 aa10.5□□□□□ -0.73
SPTLC1-206ENST00000482632 BTBD8Q5XKL5 378 aa10.5□□□□□ -0.73
SPTLC1-206ENST00000482632 CCDC186Q7Z3E2 898 aa10.5□□□□□ -0.73
SPTLC1-206ENST00000482632 CACNA2D4Q7Z3S7 1137 aa10.5□□□□□ -0.73
SPTLC1-206ENST00000482632 DDX42Q86XP3 938 aaKnown RBP eCLIP10.5□□□□□ -0.73
SPTLC1-206ENST00000482632 ARHGAP18Q8N392 663 aa10.5□□□□□ -0.73
SPTLC1-206ENST00000482632 ZNF606Q8WXB4 792 aa10.5□□□□□ -0.73
SPTLC1-206ENST00000482632 GOLGA1Q92805 767 aa10.5□□□□□ -0.73
SPTLC1-206ENST00000482632 DNASE1L2Q92874 299 aa10.5□□□□□ -0.73
SPTLC1-206ENST00000482632 ZSWIM1Q9BR11 485 aa10.5□□□□□ -0.73
SPTLC1-206ENST00000482632 FOXQ1Q9C009 403 aa10.5□□□□□ -0.73
SPTLC1-206ENST00000482632 TSPY26PQ9H489 355 aa10.5□□□□□ -0.73
SPTLC1-206ENST00000482632 DUS2Q9NX74 493 aaKnown RBP10.5□□□□□ -0.73
SPTLC1-206ENST00000482632 GTSE1Q9NYZ3 720 aa10.5□□□□□ -0.73
SPTLC1-206ENST00000482632 ARHGAP26Q9UNA1 814 aa10.5□□□□□ -0.73
SPTLC1-206ENST00000482632 CEP83Q9Y592 693 aa10.5□□□□□ -0.73
SPTLC1-206ENST00000482632 PIAS3Q9Y6X2 628 aa10.5□□□□□ -0.73
SPTLC1-206ENST00000482632 TRIOO75962 3097 aa10.5□□□□□ -0.73
SPTLC1-206ENST00000482632 SOBPA7XYQ1 873 aa10.49□□□□□ -0.73
SPTLC1-206ENST00000482632 GFPT2O94808 682 aa10.49□□□□□ -0.73
SPTLC1-206ENST00000482632 PFKLP17858 780 aa10.49□□□□□ -0.73
SPTLC1-206ENST00000482632 WEE1P30291 646 aa10.49□□□□□ -0.73
SPTLC1-206ENST00000482632 ATP5C1P36542 298 aaKnown RBP10.49□□□□□ -0.73
SPTLC1-206ENST00000482632 VCPP55072 806 aaKnown RBP10.49□□□□□ -0.73
SPTLC1-206ENST00000482632 BPIFB4P59827 614 aa10.49□□□□□ -0.73
SPTLC1-206ENST00000482632 SLC7A9P82251 487 aa10.49□□□□□ -0.73
SPTLC1-206ENST00000482632 NHLH1Q02575 133 aa10.49□□□□□ -0.73
SPTLC1-206ENST00000482632 ARID5AQ03989 594 aa10.49□□□□□ -0.73
SPTLC1-206ENST00000482632 FCHO2Q0JRZ9 810 aa10.49□□□□□ -0.73
SPTLC1-206ENST00000482632 EFEMP1Q12805 493 aa10.49□□□□□ -0.73
SPTLC1-206ENST00000482632 TUSC1Q2TAM9 212 aa10.49□□□□□ -0.73
SPTLC1-206ENST00000482632 ITPRIPL2Q3MIP1 535 aa10.49□□□□□ -0.73
SPTLC1-206ENST00000482632 PMF1Q6P1K2 205 aa10.49□□□□□ -0.73
SPTLC1-206ENST00000482632 TADA2BQ86TJ2 420 aa10.49□□□□□ -0.73
SPTLC1-206ENST00000482632 SLC47A2Q86VL8 602 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms