RNA–Protein interactions for RNA: ENST00000482310.5

HDAC1-208, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-208ENST00000482310 PDZD8Q8NEN9 1154 aa13.87□□□□□ -0.19
HDAC1-208ENST00000482310 SUSD6Q92537 303 aa13.87□□□□□ -0.19
HDAC1-208ENST00000482310 FGF13Q92913 245 aa13.87□□□□□ -0.19
HDAC1-208ENST00000482310 ZSWIM3Q96MP5 696 aa13.87□□□□□ -0.19
HDAC1-208ENST00000482310 ZNF830Q96NB3 372 aaPredicted RBP13.87□□□□□ -0.19
HDAC1-208ENST00000482310 SLC22A12Q96S37 553 aa13.87□□□□□ -0.19
HDAC1-208ENST00000482310 MYADMQ96S97 322 aa13.87□□□□□ -0.19
HDAC1-208ENST00000482310 CYP2S1Q96SQ9 504 aa13.87□□□□□ -0.19
HDAC1-208ENST00000482310 DESI2Q9BSY9 194 aa13.87□□□□□ -0.19
HDAC1-208ENST00000482310 CYLDQ9NQC7 956 aa13.87□□□□□ -0.19
HDAC1-208ENST00000482310 COMMD8Q9NX08 183 aa13.87□□□□□ -0.19
HDAC1-208ENST00000482310 RASAL2Q9UJF2 1139 aa13.87□□□□□ -0.19
HDAC1-208ENST00000482310 MIA3Q5JRA6 1907 aa13.87□□□□□ -0.19
HDAC1-208ENST00000482310 BDP1A6H8Y1 2624 aa13.87□□□□□ -0.19
HDAC1-208ENST00000482310 TICRRQ7Z2Z1 1910 aa13.86□□□□□ -0.19
HDAC1-208ENST00000482310 SYNJ2BP-COX16A0A087WUM0 186 aa13.86□□□□□ -0.19
HDAC1-208ENST00000482310 FAM92AA1XBS5 289 aa13.86□□□□□ -0.19
HDAC1-208ENST00000482310 CAPN9O14815 690 aa13.86□□□□□ -0.19
HDAC1-208ENST00000482310 SCAMP3O14828 347 aaKnown RBP13.86□□□□□ -0.19
HDAC1-208ENST00000482310 TBX18O95935 607 aa13.86□□□□□ -0.19
HDAC1-208ENST00000482310 CKMP06732 381 aa13.86□□□□□ -0.19
HDAC1-208ENST00000482310 HMBSP08397 361 aa13.86□□□□□ -0.19
HDAC1-208ENST00000482310 IRF1P10914 325 aa13.86□□□□□ -0.19
HDAC1-208ENST00000482310 MBL2P11226 248 aaPredicted RBP13.86□□□□□ -0.19
HDAC1-208ENST00000482310 RALAP11233 206 aa13.86□□□□□ -0.19
HDAC1-208ENST00000482310 NCAM1P13591 858 aa13.86□□□□□ -0.19
HDAC1-208ENST00000482310 RRM1P23921 792 aa13.86□□□□□ -0.19
HDAC1-208ENST00000482310 GABRB2P47870 512 aa13.86□□□□□ -0.19
HDAC1-208ENST00000482310 RPL34P49207 117 aaKnown RBP13.86□□□□□ -0.19
HDAC1-208ENST00000482310 CDK17Q00537 523 aa13.86□□□□□ -0.19
HDAC1-208ENST00000482310 SLC6A3Q01959 620 aa13.86□□□□□ -0.19
HDAC1-208ENST00000482310 C1QBPQ07021 282 aaKnown RBP13.86□□□□□ -0.19
HDAC1-208ENST00000482310 EFEMP1Q12805 493 aa13.86□□□□□ -0.19
HDAC1-208ENST00000482310 ASTE1Q2TB18 679 aaPredicted RBP13.86□□□□□ -0.19
HDAC1-208ENST00000482310 BSPRYQ5W0U4 402 aa13.86□□□□□ -0.19
HDAC1-208ENST00000482310 PM20D1Q6GTS8 502 aa13.86□□□□□ -0.19
HDAC1-208ENST00000482310 POTEHQ6S545 545 aa13.86□□□□□ -0.19
HDAC1-208ENST00000482310 MON1AQ86VX9 555 aa13.86□□□□□ -0.19
HDAC1-208ENST00000482310 EMC1Q8N766 993 aa13.86□□□□□ -0.19
HDAC1-208ENST00000482310 ADAM32Q8TC27 787 aa13.86□□□□□ -0.19
HDAC1-208ENST00000482310 OVCA2Q8WZ82 227 aa13.86□□□□□ -0.19
HDAC1-208ENST00000482310 RPGRIP1Q96KN7 1286 aa13.86□□□□□ -0.19
HDAC1-208ENST00000482310 NECTIN4Q96NY8 510 aa13.86□□□□□ -0.19
HDAC1-208ENST00000482310 UHRF1Q96T88 793 aaPredicted RBP13.86□□□□□ -0.19
HDAC1-208ENST00000482310 SELENOOQ9BVL4 669 aa13.86□□□□□ -0.19
HDAC1-208ENST00000482310 THAP2Q9H0W7 228 aa13.86□□□□□ -0.19
HDAC1-208ENST00000482310 SMPD4Q9NXE4 827 aa13.86□□□□□ -0.19
HDAC1-208ENST00000482310 COX16Q9P0S2 106 aa13.86□□□□□ -0.19
HDAC1-208ENST00000482310 CNOT8Q9UFF9 292 aaKnown RBP13.86□□□□□ -0.19
HDAC1-208ENST00000482310 STRIP2Q9ULQ0 834 aa13.86□□□□□ -0.19
HDAC1-208ENST00000482310 TFR2Q9UP52 801 aa13.86□□□□□ -0.19
HDAC1-208ENST00000482310 NAALADL1Q9UQQ1 740 aa13.86□□□□□ -0.19
HDAC1-208ENST00000482310 TRAV19A0A0A6YYK7 116 aa13.85□□□□□ -0.19
HDAC1-208ENST00000482310 ZNF263O14978 683 aa13.85□□□□□ -0.19
HDAC1-208ENST00000482310 COCHO43405 550 aa13.85□□□□□ -0.19
HDAC1-208ENST00000482310 TLR5O60602 858 aa13.85□□□□□ -0.19
HDAC1-208ENST00000482310 PAPLNO95428 1278 aa13.85□□□□□ -0.19
HDAC1-208ENST00000482310 GZMAP12544 262 aa13.85□□□□□ -0.19
HDAC1-208ENST00000482310 GALCP54803 685 aa13.85□□□□□ -0.19
HDAC1-208ENST00000482310 CCDC173Q0VFZ6 552 aa13.85□□□□□ -0.19
HDAC1-208ENST00000482310 SPA17Q15506 151 aa13.85□□□□□ -0.19
HDAC1-208ENST00000482310 DCAF6Q58WW2 860 aa13.85□□□□□ -0.19
HDAC1-208ENST00000482310 HECTD3Q5T447 861 aa13.85□□□□□ -0.19
HDAC1-208ENST00000482310 MIB1Q86YT6 1006 aa13.85□□□□□ -0.19
HDAC1-208ENST00000482310 LRRC8AQ8IWT6 810 aa13.85□□□□□ -0.19
HDAC1-208ENST00000482310 DEFB106AQ8N104 65 aa13.85□□□□□ -0.19
HDAC1-208ENST00000482310 ARHGAP18Q8N392 663 aa13.85□□□□□ -0.19
HDAC1-208ENST00000482310 JOSD2Q8TAC2 188 aa13.85□□□□□ -0.19
HDAC1-208ENST00000482310 RNF139Q8WU17 664 aa13.85□□□□□ -0.19
HDAC1-208ENST00000482310 IRGQQ8WZA9 623 aa13.85□□□□□ -0.19
HDAC1-208ENST00000482310 ARHGEF26Q96DR7 871 aa13.85□□□□□ -0.19
HDAC1-208ENST00000482310 PDLIM2Q96JY6 352 aa13.85□□□□□ -0.19
HDAC1-208ENST00000482310 MCEEQ96PE7 176 aa13.85□□□□□ -0.19
HDAC1-208ENST00000482310 SLC46A2Q9BY10 475 aa13.85□□□□□ -0.19
HDAC1-208ENST00000482310 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.85□□□□□ -0.19
HDAC1-208ENST00000482310 SFMBT1Q9UHJ3 866 aa13.85□□□□□ -0.19
HDAC1-208ENST00000482310 NCANO14594 1321 aa13.85□□□□□ -0.19
HDAC1-208ENST00000482310 C2CD4DB7Z1M9 353 aa13.84□□□□□ -0.19
HDAC1-208ENST00000482310 SART1O43290 800 aaKnown RBP13.84□□□□□ -0.19
HDAC1-208ENST00000482310 MSI1O43347 362 aaKnown RBP13.84□□□□□ -0.19
HDAC1-208ENST00000482310 HSF2BPO75031 334 aa13.84□□□□□ -0.19
HDAC1-208ENST00000482310 DAB1O75553 588 aa13.84□□□□□ -0.19
HDAC1-208ENST00000482310 NDUFA10O95299 355 aa13.84□□□□□ -0.19
HDAC1-208ENST00000482310 IPO7O95373 1038 aaKnown RBP13.84□□□□□ -0.19
HDAC1-208ENST00000482310 ZDHHC11BP0C7U3 371 aa13.84□□□□□ -0.19
HDAC1-208ENST00000482310 HDCP19113 662 aa13.84□□□□□ -0.19
HDAC1-208ENST00000482310 FECHP22830 423 aa13.84□□□□□ -0.19
HDAC1-208ENST00000482310 AVPR1AP37288 418 aa13.84□□□□□ -0.19
HDAC1-208ENST00000482310 PPP3CCP48454 512 aa13.84□□□□□ -0.19
HDAC1-208ENST00000482310 PITX1P78337 314 aaPredicted RBP13.84□□□□□ -0.19
HDAC1-208ENST00000482310 CCZ1BP86790 482 aa13.84□□□□□ -0.19
HDAC1-208ENST00000482310 CCZ1P86791 482 aaPredicted RBP13.84□□□□□ -0.19
HDAC1-208ENST00000482310 ZNF268Q14587 947 aaPredicted RBP13.84□□□□□ -0.19
HDAC1-208ENST00000482310 CDO1Q16878 200 aa13.84□□□□□ -0.19
HDAC1-208ENST00000482310 EFHC1Q5JVL4 640 aa13.84□□□□□ -0.19
HDAC1-208ENST00000482310 SYPL2Q5VXT5 272 aa13.84□□□□□ -0.19
HDAC1-208ENST00000482310 CCDC170Q8IYT3 715 aa13.84□□□□□ -0.19
HDAC1-208ENST00000482310 TDRD5Q8NAT2 981 aaKnown RBP13.84□□□□□ -0.19
HDAC1-208ENST00000482310 C3orf20Q8ND61 904 aa13.84□□□□□ -0.19
HDAC1-208ENST00000482310 ZSCAN18Q8TBC5 510 aaPredicted RBP13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms