RNA–Protein interactions for RNA: ENST00000482172.5

IFT88-206, Transcript of intraflagellar transport 88, humanhuman

TSL 3

Gene IFT88, Length 968 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-206ENST00000482172 LRCH4O75427 683 aa13.07□□□□□ -0.32
IFT88-206ENST00000482172 FYNP06241 537 aa13.07□□□□□ -0.32
IFT88-206ENST00000482172 ZDHHC11BP0C7U3 371 aa13.07□□□□□ -0.32
IFT88-206ENST00000482172 IRS1P35568 1242 aa13.07□□□□□ -0.32
IFT88-206ENST00000482172 PPP3CCP48454 512 aa13.07□□□□□ -0.32
IFT88-206ENST00000482172 PEX5P50542 639 aa13.07□□□□□ -0.32
IFT88-206ENST00000482172 CLCN4P51793 760 aa13.07□□□□□ -0.32
IFT88-206ENST00000482172 EPHB3P54753 998 aa13.07□□□□□ -0.32
IFT88-206ENST00000482172 USP46P62068 366 aa13.07□□□□□ -0.32
IFT88-206ENST00000482172 HADHQ16836 314 aaKnown RBP13.07□□□□□ -0.32
IFT88-206ENST00000482172 DCAF6Q58WW2 860 aa13.07□□□□□ -0.32
IFT88-206ENST00000482172 SNX30Q5VWJ9 437 aa13.07□□□□□ -0.32
IFT88-206ENST00000482172 HFE2Q6ZVN8 426 aa13.07□□□□□ -0.32
IFT88-206ENST00000482172 POLNQ7Z5Q5 900 aa13.07□□□□□ -0.32
IFT88-206ENST00000482172 SCD5Q86SK9 330 aa13.07□□□□□ -0.32
IFT88-206ENST00000482172 ITIH5Q86UX2 942 aa13.07□□□□□ -0.32
IFT88-206ENST00000482172 ARFGAP1Q8N6T3 406 aa13.07□□□□□ -0.32
IFT88-206ENST00000482172 KREMEN2Q8NCW0 462 aa13.07□□□□□ -0.32
IFT88-206ENST00000482172 PDZD8Q8NEN9 1154 aa13.07□□□□□ -0.32
IFT88-206ENST00000482172 GIPC2Q8TF65 315 aa13.07□□□□□ -0.32
IFT88-206ENST00000482172 FBXO32Q969P5 355 aa13.07□□□□□ -0.32
IFT88-206ENST00000482172 TIFAQ96CG3 184 aa13.07□□□□□ -0.32
IFT88-206ENST00000482172 PBKQ96KB5 322 aa13.07□□□□□ -0.32
IFT88-206ENST00000482172 CFAP57Q96MR6 1250 aa13.07□□□□□ -0.32
IFT88-206ENST00000482172 SLITRK1Q96PX8 696 aa13.07□□□□□ -0.32
IFT88-206ENST00000482172 OSBPL9Q96SU4 736 aa13.07□□□□□ -0.32
IFT88-206ENST00000482172 PLEKHA4Q9H4M7 779 aa13.07□□□□□ -0.32
IFT88-206ENST00000482172 TLR8Q9NR97 1041 aaKnown RBP13.07□□□□□ -0.32
IFT88-206ENST00000482172 UXTQ9UBK9 157 aaPredicted RBP13.07□□□□□ -0.32
IFT88-206ENST00000482172 DPP7Q9UHL4 492 aa13.07□□□□□ -0.32
IFT88-206ENST00000482172 CDC23Q9UJX2 597 aa13.07□□□□□ -0.32
IFT88-206ENST00000482172 GREB1Q4ZG55 1949 aa13.06□□□□□ -0.32
IFT88-206ENST00000482172 CLASP2O75122 1294 aaKnown RBP13.06□□□□□ -0.32
IFT88-206ENST00000482172 URI1O94763 535 aaPredicted RBP13.06□□□□□ -0.32
IFT88-206ENST00000482172 F9P00740 461 aa13.06□□□□□ -0.32
IFT88-206ENST00000482172 KRT7P08729 469 aa13.06□□□□□ -0.32
IFT88-206ENST00000482172 NCAM1P13591 858 aa13.06□□□□□ -0.32
IFT88-206ENST00000482172 HMGA1P17096 107 aaKnown RBP13.06□□□□□ -0.32
IFT88-206ENST00000482172 HOXA9P31269 272 aa13.06□□□□□ -0.32
IFT88-206ENST00000482172 TWF1Q12792 350 aa13.06□□□□□ -0.32
IFT88-206ENST00000482172 TAF10Q12962 218 aa13.06□□□□□ -0.32
IFT88-206ENST00000482172 BTBD8Q5XKL5 378 aa13.06□□□□□ -0.32
IFT88-206ENST00000482172 ELMSAN1Q6PJG2 1045 aa13.06□□□□□ -0.32
IFT88-206ENST00000482172 GPR152Q8TDT2 470 aa13.06□□□□□ -0.32
IFT88-206ENST00000482172 FAM172AQ8WUF8 416 aa13.06□□□□□ -0.32
IFT88-206ENST00000482172 SLC22A17Q8WUG5 538 aa13.06□□□□□ -0.32
IFT88-206ENST00000482172 ARNTL2Q8WYA1 636 aa13.06□□□□□ -0.32
IFT88-206ENST00000482172 PSMG2Q969U7 264 aa13.06□□□□□ -0.32
IFT88-206ENST00000482172 TBCBQ99426 244 aa13.06□□□□□ -0.32
IFT88-206ENST00000482172 CARD9Q9H257 536 aa13.06□□□□□ -0.32
IFT88-206ENST00000482172 DDX56Q9NY93 547 aaKnown RBP13.06□□□□□ -0.32
IFT88-206ENST00000482172 RNF14Q9UBS8 474 aa13.06□□□□□ -0.32
IFT88-206ENST00000482172 PACSIN2Q9UNF0 486 aaPredicted RBP13.06□□□□□ -0.32
IFT88-206ENST00000482172 NAALADL1Q9UQQ1 740 aa13.06□□□□□ -0.32
IFT88-206ENST00000482172 USTQ9Y2C2 406 aa13.06□□□□□ -0.32
IFT88-206ENST00000482172 A0A1W2PQH9 124 aa13.05□□□□□ -0.32
IFT88-206ENST00000482172 TRUB2O95900 331 aaKnown RBP13.05□□□□□ -0.32
IFT88-206ENST00000482172 LRG1P02750 347 aa13.05□□□□□ -0.32
IFT88-206ENST00000482172 C8AP07357 584 aa13.05□□□□□ -0.32
IFT88-206ENST00000482172 POU2F2P09086 479 aa13.05□□□□□ -0.32
IFT88-206ENST00000482172 RALAP11233 206 aa13.05□□□□□ -0.32
IFT88-206ENST00000482172 MIPP30301 263 aa13.05□□□□□ -0.32
IFT88-206ENST00000482172 GBP1P32455 592 aa13.05□□□□□ -0.32
IFT88-206ENST00000482172 SULT1E1P49888 294 aa13.05□□□□□ -0.32
IFT88-206ENST00000482172 RWDD2BP57060 319 aa13.05□□□□□ -0.32
IFT88-206ENST00000482172 TAS2R40P59535 323 aa13.05□□□□□ -0.32
IFT88-206ENST00000482172 ATP11AP98196 1134 aa13.05□□□□□ -0.32
IFT88-206ENST00000482172 SLC25A11Q02978 314 aaKnown RBP13.05□□□□□ -0.32
IFT88-206ENST00000482172 IFRD2Q12894 506 aaPredicted RBP13.05□□□□□ -0.32
IFT88-206ENST00000482172 MTMR3Q13615 1198 aa13.05□□□□□ -0.32
IFT88-206ENST00000482172 CLUL1Q15846 466 aa13.05□□□□□ -0.32
IFT88-206ENST00000482172 TAF12Q16514 161 aa13.05□□□□□ -0.32
IFT88-206ENST00000482172 PTPROQ16827 1216 aa13.05□□□□□ -0.32
IFT88-206ENST00000482172 WHAMMP3Q1A5X7 153 aa13.05□□□□□ -0.32
IFT88-206ENST00000482172 C15orf59Q2T9L4 293 aaPredicted RBP13.05□□□□□ -0.32
IFT88-206ENST00000482172 BOLA3Q53S33 107 aa13.05□□□□□ -0.32
IFT88-206ENST00000482172 SYPL2Q5VXT5 272 aa13.05□□□□□ -0.32
IFT88-206ENST00000482172 MSANTD2Q6P1R3 559 aa13.05□□□□□ -0.32
IFT88-206ENST00000482172 DNAJB7Q7Z6W7 309 aaPredicted RBP13.05□□□□□ -0.32
IFT88-206ENST00000482172 CPNE8Q86YQ8 564 aa13.05□□□□□ -0.32
IFT88-206ENST00000482172 KATNAL2Q8IYT4 538 aa13.05□□□□□ -0.32
IFT88-206ENST00000482172 SLC7A14Q8TBB6 771 aa13.05□□□□□ -0.32
IFT88-206ENST00000482172 TEKT4Q8WW24 435 aa13.05□□□□□ -0.32
IFT88-206ENST00000482172 KRT35Q92764 455 aa13.05□□□□□ -0.32
IFT88-206ENST00000482172 CDK5RAP1Q96SZ6 601 aaKnown RBP13.05□□□□□ -0.32
IFT88-206ENST00000482172 CDCA3Q99618 268 aaPredicted RBP13.05□□□□□ -0.32
IFT88-206ENST00000482172 L2HGDHQ9H9P8 463 aa13.05□□□□□ -0.32
IFT88-206ENST00000482172 CERS4Q9HA82 394 aa13.05□□□□□ -0.32
IFT88-206ENST00000482172 NMUR1Q9HB89 426 aa13.05□□□□□ -0.32
IFT88-206ENST00000482172 OLA1Q9NTK5 396 aaKnown RBP13.05□□□□□ -0.32
IFT88-206ENST00000482172 GMIPQ9P107 970 aa13.05□□□□□ -0.32
IFT88-206ENST00000482172 USP18Q9UMW8 372 aa13.05□□□□□ -0.32
IFT88-206ENST00000482172 MRFAP1Q9Y605 127 aa13.05□□□□□ -0.32
IFT88-206ENST00000482172 M0QYT0 321 aa13.04□□□□□ -0.32
IFT88-206ENST00000482172 KCNK3O14649 394 aa13.04□□□□□ -0.32
IFT88-206ENST00000482172 PRPSAP2O60256 369 aa13.04□□□□□ -0.32
IFT88-206ENST00000482172 ZMYND10O75800 440 aa13.04□□□□□ -0.32
IFT88-206ENST00000482172 IGLV3-25P01717 112 aa13.04□□□□□ -0.32
IFT88-206ENST00000482172 HNRNPA1P09651 372 aaKnown RBP eCLIP13.04□□□□□ -0.32
IFT88-206ENST00000482172 RDXP35241 583 aaKnown RBP13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms