RNA–Protein interactions for RNA: ENST00000481999.1

CHD3-211, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 2,515 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-211ENST00000481999 KPNA6O60684 536 aa15.07■□□□□ 0
CHD3-211ENST00000481999 IFNAR2P48551 515 aa15.07■□□□□ 0
CHD3-211ENST00000481999 MAP3K7CLP57077 242 aa15.07■□□□□ 0
CHD3-211ENST00000481999 C1orf228Q6PIY5 440 aa15.07■□□□□ 0
CHD3-211ENST00000481999 HFE2Q6ZVN8 426 aa15.07■□□□□ 0
CHD3-211ENST00000481999 GPRIN1Q7Z2K8 1008 aa15.07■□□□□ 0
CHD3-211ENST00000481999 UNC45BQ8IWX7 931 aa15.07■□□□□ 0
CHD3-211ENST00000481999 PYROXD2Q8N2H3 581 aa15.07■□□□□ 0
CHD3-211ENST00000481999 CMASQ8NFW8 434 aaPredicted RBP15.07■□□□□ 0
CHD3-211ENST00000481999 FAM149B1Q96BN6 582 aa15.07■□□□□ 0
CHD3-211ENST00000481999 CTNNAL1Q9UBT7 734 aa15.07■□□□□ 0
CHD3-211ENST00000481999 SRRDQ9UH36 339 aa15.07■□□□□ 0
CHD3-211ENST00000481999 BPTFQ12830 3046 aa15.06■□□□□ 0
CHD3-211ENST00000481999 ZNF638Q14966 1978 aaKnown RBP15.06■□□□□ 0
CHD3-211ENST00000481999 PRPSAP2O60256 369 aa15.06■□□□□ 0
CHD3-211ENST00000481999 IL4RP24394 825 aa15.06■□□□□ 0
CHD3-211ENST00000481999 LRPAP1P30533 357 aa15.06■□□□□ 0
CHD3-211ENST00000481999 SDC4P31431 198 aa15.06■□□□□ 0
CHD3-211ENST00000481999 CETN2P41208 172 aa15.06■□□□□ 0
CHD3-211ENST00000481999 ACLYP53396 1101 aa15.06■□□□□ 0
CHD3-211ENST00000481999 BCAT1P54687 386 aa15.06■□□□□ 0
CHD3-211ENST00000481999 VCPP55072 806 aaKnown RBP15.06■□□□□ 0
CHD3-211ENST00000481999 DPYSL3Q14195 570 aa15.06■□□□□ 0
CHD3-211ENST00000481999 MBTPS1Q14703 1052 aa15.06■□□□□ 0
CHD3-211ENST00000481999 TIGD5Q53EQ6 642 aa15.06■□□□□ 0
CHD3-211ENST00000481999 ARHGAP17Q68EM7 881 aa15.06■□□□□ 0
CHD3-211ENST00000481999 LIMS2Q7Z4I7 341 aa15.06■□□□□ 0
CHD3-211ENST00000481999 ALLCQ8N6M5 410 aa15.06■□□□□ 0
CHD3-211ENST00000481999 DYDC1Q8WWB3 177 aa15.06■□□□□ 0
CHD3-211ENST00000481999 SNRNP25Q9BV90 132 aaKnown RBP15.06■□□□□ 0
CHD3-211ENST00000481999 MFHAS1Q9Y4C4 1052 aa15.06■□□□□ 0
CHD3-211ENST00000481999 XPOTO43592 962 aaKnown RBP15.06■□□□□ 0
CHD3-211ENST00000481999 B3GAT3O94766 335 aa15.06■□□□□ 0
CHD3-211ENST00000481999 PTPN1P18031 435 aaKnown RBP15.06■□□□□ 0
CHD3-211ENST00000481999 PNPLA4P41247 253 aa15.06■□□□□ 0
CHD3-211ENST00000481999 CEP128Q6ZU80 1094 aa15.06■□□□□ 0
CHD3-211ENST00000481999 CCDC185Q8N715 623 aa15.06■□□□□ 0
CHD3-211ENST00000481999 FAM71DQ8N9W8 422 aa15.06■□□□□ 0
CHD3-211ENST00000481999 SLC35B2Q8TB61 432 aa15.06■□□□□ 0
CHD3-211ENST00000481999 ADAM32Q8TC27 787 aa15.06■□□□□ 0
CHD3-211ENST00000481999 TMEM209Q96SK2 561 aa15.06■□□□□ 0
CHD3-211ENST00000481999 NINJ2Q9NZG7 142 aa15.06■□□□□ 0
CHD3-211ENST00000481999 TMEM120BA0PK00 339 aa15.05■□□□□ 0
CHD3-211ENST00000481999 DNAJC8O75937 253 aaPredicted RBP15.05■□□□□ 0
CHD3-211ENST00000481999 ANKRD22Q5VYY1 191 aa15.05■□□□□ 0
CHD3-211ENST00000481999 CLEC20AQ6ZU45 233 aa15.05■□□□□ 0
CHD3-211ENST00000481999 RELL1Q8IUW5 271 aa15.05■□□□□ 0
CHD3-211ENST00000481999 TTC39CQ8N584 583 aa15.05■□□□□ 0
CHD3-211ENST00000481999 SPATA18Q8TC71 538 aa15.05■□□□□ 0
CHD3-211ENST00000481999 RAET1EQ8TD07 263 aa15.05■□□□□ 0
CHD3-211ENST00000481999 PCED1BQ96HM7 432 aa15.05■□□□□ 0
CHD3-211ENST00000481999 ELAC2Q9BQ52 826 aaKnown RBP15.05■□□□□ 0
CHD3-211ENST00000481999 BEGAINQ9BUH8 593 aa15.05■□□□□ 0
CHD3-211ENST00000481999 FOXP3Q9BZS1 431 aa15.05■□□□□ 0
CHD3-211ENST00000481999 KRT82Q9NSB4 513 aa15.05■□□□□ 0
CHD3-211ENST00000481999 HEY1Q9Y5J3 304 aa15.05■□□□□ 0
CHD3-211ENST00000481999 TCRBV7S3A2A0A539 114 aa15.05■□□□□ -0
CHD3-211ENST00000481999 GPR182O15218 404 aa15.05■□□□□ -0
CHD3-211ENST00000481999 GSTA1P08263 222 aa15.05■□□□□ -0
CHD3-211ENST00000481999 LMNB2Q03252 620 aa15.05■□□□□ -0
CHD3-211ENST00000481999 XRCC4Q13426 336 aa15.05■□□□□ -0
CHD3-211ENST00000481999 STILQ15468 1287 aa15.05■□□□□ -0
CHD3-211ENST00000481999 UPP1Q16831 310 aa15.05■□□□□ -0
CHD3-211ENST00000481999 FAM131BQ86XD5 332 aa15.05■□□□□ -0
CHD3-211ENST00000481999 STKLD1Q8NE28 680 aa15.05■□□□□ -0
CHD3-211ENST00000481999 TBCBQ99426 244 aa15.05■□□□□ -0
CHD3-211ENST00000481999 CCDC77Q9BR77 488 aa15.05■□□□□ -0
CHD3-211ENST00000481999 MED10Q9BTT4 135 aa15.05■□□□□ -0
CHD3-211ENST00000481999 RANBP2P49792 3224 aaKnown RBP15.04■□□□□ -0
CHD3-211ENST00000481999 GABRDO14764 452 aa15.04■□□□□ -0
CHD3-211ENST00000481999 AMHP03971 560 aa15.04■□□□□ -0
CHD3-211ENST00000481999 COPS2P61201 443 aa15.04■□□□□ -0
CHD3-211ENST00000481999 SYPL2Q5VXT5 272 aa15.04■□□□□ -0
CHD3-211ENST00000481999 DSTYKQ6XUX3 929 aa15.04■□□□□ -0
CHD3-211ENST00000481999 BBS12Q6ZW61 710 aa15.04■□□□□ -0
CHD3-211ENST00000481999 CCHCR1Q8TD31 782 aa15.04■□□□□ -0
CHD3-211ENST00000481999 SGSM3Q96HU1 749 aa15.04■□□□□ -0
CHD3-211ENST00000481999 RSAD1Q9HA92 442 aa15.04■□□□□ -0
CHD3-211ENST00000481999 LGALS13Q9UHV8 139 aa15.04■□□□□ -0
CHD3-211ENST00000481999 CASP8AP2Q9UKL3 1982 aa15.04■□□□□ -0
CHD3-211ENST00000481999 TET1Q8NFU7 2136 aa15.04■□□□□ -0
CHD3-211ENST00000481999 NRP1O14786 923 aa15.04■□□□□ -0
CHD3-211ENST00000481999 WARSP23381 471 aaKnown RBP15.04■□□□□ -0
CHD3-211ENST00000481999 PCK1P35558 622 aa15.04■□□□□ -0
CHD3-211ENST00000481999 ADCY1Q08828 1119 aa15.04■□□□□ -0
CHD3-211ENST00000481999 TAZQ16635 292 aa15.04■□□□□ -0
CHD3-211ENST00000481999 TRIM71Q2Q1W2 868 aaKnown RBP15.04■□□□□ -0
CHD3-211ENST00000481999 MAP3K21Q5TCX8 1036 aa15.04■□□□□ -0
CHD3-211ENST00000481999 CYB5D1Q6P9G0 228 aa15.04■□□□□ -0
CHD3-211ENST00000481999 VSTM1Q6UX27 236 aa15.04■□□□□ -0
CHD3-211ENST00000481999 RTN4RL1Q86UN2 441 aaPredicted RBP15.04■□□□□ -0
CHD3-211ENST00000481999 TOP6BLQ8N6T0 577 aa15.04■□□□□ -0
CHD3-211ENST00000481999 TNIP3Q96KP6 325 aa15.04■□□□□ -0
CHD3-211ENST00000481999 HAUS2Q9NVX0 235 aa15.04■□□□□ -0
CHD3-211ENST00000481999 SAGE1Q9NXZ1 904 aa15.04■□□□□ -0
CHD3-211ENST00000481999 SNX3O60493 162 aa15.03■□□□□ -0
CHD3-211ENST00000481999 CDH16O75309 829 aa15.03■□□□□ -0
CHD3-211ENST00000481999 INHAP05111 366 aa15.03■□□□□ -0
CHD3-211ENST00000481999 RBP3P10745 1247 aa15.03■□□□□ -0
CHD3-211ENST00000481999 PTPN7P35236 360 aa15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms