RNA–Protein interactions for RNA: ENST00000481456.1

DDX39B-219, Transcript of DExD-box helicase 39B, humanhuman

TSL 2

Gene DDX39B, Length 5,158 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-219ENST00000481456 NT5C1AQ9BXI3 368 aa11.9□□□□□ -0.5
DDX39B-219ENST00000481456 GRIP2Q9C0E4 1043 aa11.9□□□□□ -0.5
DDX39B-219ENST00000481456 C10orf88Q9H8K7 445 aa11.9□□□□□ -0.5
DDX39B-219ENST00000481456 FBXO28Q9NVF7 368 aa11.9□□□□□ -0.5
DDX39B-219ENST00000481456 HOXC10Q9NYD6 342 aa11.9□□□□□ -0.5
DDX39B-219ENST00000481456 NKX1-2Q9UD57 310 aaPredicted RBP11.9□□□□□ -0.5
DDX39B-219ENST00000481456 RPS6KL1Q9Y6S9 549 aa11.9□□□□□ -0.5
DDX39B-219ENST00000481456 KDELR1P24390 212 aa11.9□□□□□ -0.5
DDX39B-219ENST00000481456 RNF135Q8IUD6 432 aa11.9□□□□□ -0.5
DDX39B-219ENST00000481456 SLC39A10Q9ULF5 831 aa11.9□□□□□ -0.5
DDX39B-219ENST00000481456 SNX13Q9Y5W8 968 aa11.9□□□□□ -0.5
DDX39B-219ENST00000481456 C5P01031 1676 aa11.9□□□□□ -0.5
DDX39B-219ENST00000481456 C16orf96A6NNT2 1141 aa11.9□□□□□ -0.5
DDX39B-219ENST00000481456 PSMD3O43242 534 aa11.9□□□□□ -0.5
DDX39B-219ENST00000481456 MGEA5O60502 916 aa11.9□□□□□ -0.5
DDX39B-219ENST00000481456 UQCRBP14927 111 aa11.9□□□□□ -0.5
DDX39B-219ENST00000481456 EIF4BP23588 611 aaKnown RBP11.9□□□□□ -0.5
DDX39B-219ENST00000481456 MYL6P60660 151 aa11.9□□□□□ -0.5
DDX39B-219ENST00000481456 NOMO3P69849 1222 aa11.9□□□□□ -0.5
DDX39B-219ENST00000481456 WASHC5Q12768 1159 aa11.9□□□□□ -0.5
DDX39B-219ENST00000481456 PTK2BQ14289 1009 aa11.9□□□□□ -0.5
DDX39B-219ENST00000481456 CAMTA1Q9Y6Y1 1673 aa11.9□□□□□ -0.5
DDX39B-219ENST00000481456 TM7SF2O76062 418 aa11.9□□□□□ -0.5
DDX39B-219ENST00000481456 RPS6KA3P51812 740 aa11.9□□□□□ -0.5
DDX39B-219ENST00000481456 GOLGA7BQ2TAP0 167 aa11.9□□□□□ -0.5
DDX39B-219ENST00000481456 ANO7Q6IWH7 933 aa11.9□□□□□ -0.5
DDX39B-219ENST00000481456 PPHLN1Q8NEY8 458 aaKnown RBP11.9□□□□□ -0.5
DDX39B-219ENST00000481456 KIF12Q96FN5 646 aa11.9□□□□□ -0.5
DDX39B-219ENST00000481456 NOCTQ9UK39 431 aaKnown RBP11.9□□□□□ -0.5
DDX39B-219ENST00000481456 PARP4Q9UKK3 1724 aaKnown RBP11.9□□□□□ -0.5
DDX39B-219ENST00000481456 OGTO15294 1046 aa11.9□□□□□ -0.51
DDX39B-219ENST00000481456 BIRC5O15392 142 aa11.9□□□□□ -0.51
DDX39B-219ENST00000481456 MAP3K6O95382 1288 aa11.9□□□□□ -0.51
DDX39B-219ENST00000481456 UBAP2LQ14157 1087 aaKnown RBP11.9□□□□□ -0.51
DDX39B-219ENST00000481456 LIN52Q52LA3 116 aa11.9□□□□□ -0.51
DDX39B-219ENST00000481456 ATF7IP2Q5U623 682 aa11.9□□□□□ -0.51
DDX39B-219ENST00000481456 ZC3H3Q8IXZ2 948 aaKnown RBP11.9□□□□□ -0.51
DDX39B-219ENST00000481456 CNDP1Q96KN2 507 aa11.9□□□□□ -0.51
DDX39B-219ENST00000481456 CLIC5Q9NZA1 410 aa11.9□□□□□ -0.51
DDX39B-219ENST00000481456 SAE1Q9UBE0 346 aaPredicted RBP11.9□□□□□ -0.51
DDX39B-219ENST00000481456 LRRC42Q9Y546 428 aa11.9□□□□□ -0.51
DDX39B-219ENST00000481456 LAMA4Q16363 1823 aa11.89□□□□□ -0.51
DDX39B-219ENST00000481456 RGPD2P0DJD1 1756 aa11.89□□□□□ -0.51
DDX39B-219ENST00000481456 TIMM44O43615 452 aa11.89□□□□□ -0.51
DDX39B-219ENST00000481456 SERPINB10P48595 397 aa11.89□□□□□ -0.51
DDX39B-219ENST00000481456 PSEN1P49768 467 aa11.89□□□□□ -0.51
DDX39B-219ENST00000481456 SOX10P56693 466 aa11.89□□□□□ -0.51
DDX39B-219ENST00000481456 WDR4P57081 412 aaKnown RBP11.89□□□□□ -0.51
DDX39B-219ENST00000481456 ITGA9Q13797 1035 aa11.89□□□□□ -0.51
DDX39B-219ENST00000481456 RFWD3Q6PCD5 774 aa11.89□□□□□ -0.51
DDX39B-219ENST00000481456 DDIASQ8IXT1 998 aa11.89□□□□□ -0.51
DDX39B-219ENST00000481456 NMUR2Q9GZQ4 415 aa11.89□□□□□ -0.51
DDX39B-219ENST00000481456 CCDC90BQ9GZT6 254 aa11.89□□□□□ -0.51
DDX39B-219ENST00000481456 LZTS1Q9Y250 596 aa11.89□□□□□ -0.51
DDX39B-219ENST00000481456 A0A0B4J269 797 aa11.89□□□□□ -0.51
DDX39B-219ENST00000481456 TTC36A6NLP5 189 aa11.89□□□□□ -0.51
DDX39B-219ENST00000481456 ZBTB24O43167 697 aaPredicted RBP11.89□□□□□ -0.51
DDX39B-219ENST00000481456 E2F6O75461 281 aa11.89□□□□□ -0.51
DDX39B-219ENST00000481456 MYL4P12829 197 aa11.89□□□□□ -0.51
DDX39B-219ENST00000481456 ETS2P15036 469 aa11.89□□□□□ -0.51
DDX39B-219ENST00000481456 CDK7P50613 346 aa11.89□□□□□ -0.51
DDX39B-219ENST00000481456 TMEM132DQ14C87 1099 aa11.89□□□□□ -0.51
DDX39B-219ENST00000481456 ADGRD1Q6QNK2 874 aa11.89□□□□□ -0.51
DDX39B-219ENST00000481456 DLG3Q92796 817 aa11.89□□□□□ -0.51
DDX39B-219ENST00000481456 RMND5BQ96G75 393 aaPredicted RBP11.89□□□□□ -0.51
DDX39B-219ENST00000481456 PRPF18Q99633 342 aaKnown RBP11.89□□□□□ -0.51
DDX39B-219ENST00000481456 TMEM79Q9BSE2 394 aa11.89□□□□□ -0.51
DDX39B-219ENST00000481456 NACA2Q9H009 215 aa11.89□□□□□ -0.51
DDX39B-219ENST00000481456 ADNPQ9H2P0 1102 aa11.89□□□□□ -0.51
DDX39B-219ENST00000481456 ZNF70Q9UC06 446 aaPredicted RBP11.89□□□□□ -0.51
DDX39B-219ENST00000481456 MYH15Q9Y2K3 1946 aa11.89□□□□□ -0.51
DDX39B-219ENST00000481456 SPATA31A5Q5VU36 1347 aa11.89□□□□□ -0.51
DDX39B-219ENST00000481456 SPATA31A7Q8IWB4 1347 aa11.89□□□□□ -0.51
DDX39B-219ENST00000481456 C3orf70A6NLC5 250 aaPredicted RBP11.89□□□□□ -0.51
DDX39B-219ENST00000481456 DCXO43602 365 aa11.89□□□□□ -0.51
DDX39B-219ENST00000481456 RTN3O95197 1032 aaPredicted RBP11.89□□□□□ -0.51
DDX39B-219ENST00000481456 PGM3O95394 542 aa11.89□□□□□ -0.51
DDX39B-219ENST00000481456 VDRP11473 427 aa11.89□□□□□ -0.51
DDX39B-219ENST00000481456 TPI1P60174 286 aa11.89□□□□□ -0.51
DDX39B-219ENST00000481456 MGAT5Q09328 741 aa11.89□□□□□ -0.51
DDX39B-219ENST00000481456 SPP2Q13103 211 aa11.89□□□□□ -0.51
DDX39B-219ENST00000481456 SEMA4DQ92854 862 aa11.89□□□□□ -0.51
DDX39B-219ENST00000481456 PTPRN2Q92932 1015 aa11.89□□□□□ -0.51
DDX39B-219ENST00000481456 USP13Q92995 863 aaPredicted RBP11.89□□□□□ -0.51
DDX39B-219ENST00000481456 ELMO2Q96JJ3 720 aa11.89□□□□□ -0.51
DDX39B-219ENST00000481456 GPATCH2LQ9NWQ4 482 aa11.89□□□□□ -0.51
DDX39B-219ENST00000481456 TMEM150BA6NC51 233 aa11.89□□□□□ -0.51
DDX39B-219ENST00000481456 DEAF1O75398 565 aaPredicted RBP11.89□□□□□ -0.51
DDX39B-219ENST00000481456 VAV1P15498 845 aa11.89□□□□□ -0.51
DDX39B-219ENST00000481456 CHRNB2P17787 502 aa11.89□□□□□ -0.51
DDX39B-219ENST00000481456 NAB1Q13506 487 aa11.89□□□□□ -0.51
DDX39B-219ENST00000481456 MTMR2Q13614 643 aa11.89□□□□□ -0.51
DDX39B-219ENST00000481456 ACAP1Q15027 740 aa11.89□□□□□ -0.51
DDX39B-219ENST00000481456 SLC35G1Q2M3R5 365 aa11.89□□□□□ -0.51
DDX39B-219ENST00000481456 PPP1R15BQ5SWA1 713 aa11.89□□□□□ -0.51
DDX39B-219ENST00000481456 TSHZ1Q6ZSZ6 1077 aa11.89□□□□□ -0.51
DDX39B-219ENST00000481456 POLNQ7Z5Q5 900 aa11.89□□□□□ -0.51
DDX39B-219ENST00000481456 CROCCP3Q8IVE0 287 aa11.89□□□□□ -0.51
DDX39B-219ENST00000481456 EZH1Q92800 747 aaPredicted RBP11.89□□□□□ -0.51
DDX39B-219ENST00000481456 S100A14Q9HCY8 104 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms