RNA–Protein interactions for RNA: ENST00000481173.1

CCNL1-223, Transcript of cyclin L1, humanhuman

TSL 2

Gene CCNL1, Length 571 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-223ENST00000481173 CXorf57Q6NSI4 855 aaKnown RBP3.95□□□□□ -1.78
CCNL1-223ENST00000481173 ZNF549Q6P9A3 640 aa3.95□□□□□ -1.78
CCNL1-223ENST00000481173 PTCHD4Q6ZW05 846 aa3.95□□□□□ -1.78
CCNL1-223ENST00000481173 PIM3Q86V86 326 aa3.95□□□□□ -1.78
CCNL1-223ENST00000481173 SFTPA1Q8IWL2 248 aa3.95□□□□□ -1.78
CCNL1-223ENST00000481173 SUGP2Q8IX01 1082 aaKnown RBP eCLIP3.95□□□□□ -1.78
CCNL1-223ENST00000481173 C11orf44Q8N8P7 122 aa3.95□□□□□ -1.78
CCNL1-223ENST00000481173 ZNF398Q8TD17 642 aa3.95□□□□□ -1.78
CCNL1-223ENST00000481173 CTHRC1Q96CG8 243 aa3.95□□□□□ -1.78
CCNL1-223ENST00000481173 SUCLG2Q96I99 432 aa3.95□□□□□ -1.78
CCNL1-223ENST00000481173 TRMOQ9BU70 441 aa3.95□□□□□ -1.78
CCNL1-223ENST00000481173 TRIM5Q9C035 493 aa3.95□□□□□ -1.78
CCNL1-223ENST00000481173 FAM234AQ9H0X4 552 aa3.95□□□□□ -1.78
CCNL1-223ENST00000481173 MGAT4CQ9UBM8 478 aa3.95□□□□□ -1.78
CCNL1-223ENST00000481173 DDX20Q9UHI6 824 aaKnown RBP3.95□□□□□ -1.78
CCNL1-223ENST00000481173 TRIM43BA6NCK2 446 aa3.94□□□□□ -1.78
CCNL1-223ENST00000481173 BTBD19C9JJ37 291 aa3.94□□□□□ -1.78
CCNL1-223ENST00000481173 AGPSO00116 658 aa3.94□□□□□ -1.78
CCNL1-223ENST00000481173 CD3EAPO15446 510 aaKnown RBP3.94□□□□□ -1.78
CCNL1-223ENST00000481173 SPRY2O43597 315 aa3.94□□□□□ -1.78
CCNL1-223ENST00000481173 RRP9O43818 475 aaKnown RBP3.94□□□□□ -1.78
CCNL1-223ENST00000481173 TLR2O60603 784 aa3.94□□□□□ -1.78
CCNL1-223ENST00000481173 MAP4K4O95819 1239 aaPredicted RBP3.94□□□□□ -1.78
CCNL1-223ENST00000481173 ME1P48163 572 aa3.94□□□□□ -1.78
CCNL1-223ENST00000481173 MTHFSP49914 203 aa3.94□□□□□ -1.78
CCNL1-223ENST00000481173 TIRAPP58753 221 aa3.94□□□□□ -1.78
CCNL1-223ENST00000481173 RPS16P62249 146 aaKnown RBP3.94□□□□□ -1.78
CCNL1-223ENST00000481173 FMO1Q01740 532 aa3.94□□□□□ -1.78
CCNL1-223ENST00000481173 SRSF1Q07955 248 aaKnown RBP eCLIP3.94□□□□□ -1.78
CCNL1-223ENST00000481173 STK3Q13188 491 aa3.94□□□□□ -1.78
CCNL1-223ENST00000481173 CNGA2Q16280 664 aa3.94□□□□□ -1.78
CCNL1-223ENST00000481173 PLEKHG6Q3KR16 790 aa3.94□□□□□ -1.78
CCNL1-223ENST00000481173 ZNF585BQ52M93 769 aa3.94□□□□□ -1.78
CCNL1-223ENST00000481173 FAM102BQ5T8I3 360 aa3.94□□□□□ -1.78
CCNL1-223ENST00000481173 ANKRD13BQ86YJ7 626 aa3.94□□□□□ -1.78
CCNL1-223ENST00000481173 RAB11FIP4Q86YS3 637 aa3.94□□□□□ -1.78
CCNL1-223ENST00000481173 TRIM43Q96BQ3 446 aaPredicted RBP3.94□□□□□ -1.78
CCNL1-223ENST00000481173 VN1R3Q9BXE9 311 aa3.94□□□□□ -1.78
CCNL1-223ENST00000481173 HS3ST3B1Q9Y662 390 aa3.94□□□□□ -1.78
CCNL1-223ENST00000481173 MBD3L4A6NDZ8 208 aaPredicted RBP3.93□□□□□ -1.78
CCNL1-223ENST00000481173 MBD3L3A6NE82 208 aaPredicted RBP3.93□□□□□ -1.78
CCNL1-223ENST00000481173 FAM227AF5H4B4 570 aa3.93□□□□□ -1.78
CCNL1-223ENST00000481173 EXOC5O00471 708 aa3.93□□□□□ -1.78
CCNL1-223ENST00000481173 PIAS2O75928 621 aa3.93□□□□□ -1.78
CCNL1-223ENST00000481173 APEHP13798 732 aaKnown RBP3.93□□□□□ -1.78
CCNL1-223ENST00000481173 NTSR1P30989 418 aa3.93□□□□□ -1.78
CCNL1-223ENST00000481173 GATMP50440 423 aa3.93□□□□□ -1.78
CCNL1-223ENST00000481173 PGDP52209 483 aa3.93□□□□□ -1.78
CCNL1-223ENST00000481173 ARHGEF7Q14155 803 aa3.93□□□□□ -1.78
CCNL1-223ENST00000481173 SLC29A2Q14542 456 aa3.93□□□□□ -1.78
CCNL1-223ENST00000481173 PPP2R5AQ15172 486 aa3.93□□□□□ -1.78
CCNL1-223ENST00000481173 NFE2Q16621 373 aaPredicted RBP3.93□□□□□ -1.78
CCNL1-223ENST00000481173 TMTC4Q5T4D3 741 aa3.93□□□□□ -1.78
CCNL1-223ENST00000481173 RNF220Q5VTB9 566 aa3.93□□□□□ -1.78
CCNL1-223ENST00000481173 TMEM65Q6PI78 240 aa3.93□□□□□ -1.78
CCNL1-223ENST00000481173 CCDC149Q6ZUS6 474 aa3.93□□□□□ -1.78
CCNL1-223ENST00000481173 PELI3Q8N2H9 469 aa3.93□□□□□ -1.78
CCNL1-223ENST00000481173 ARFGAP1Q8N6T3 406 aa3.93□□□□□ -1.78
CCNL1-223ENST00000481173 MAFAQ8NHW3 353 aaPredicted RBP3.93□□□□□ -1.78
CCNL1-223ENST00000481173 NMD3Q96D46 503 aaKnown RBP3.93□□□□□ -1.78
CCNL1-223ENST00000481173 WDYHV1Q96HA8 205 aa3.93□□□□□ -1.78
CCNL1-223ENST00000481173 C1orf112Q9NSG2 853 aa3.93□□□□□ -1.78
CCNL1-223ENST00000481173 MDFICQ9P1T7 246 aa3.93□□□□□ -1.78
CCNL1-223ENST00000481173 COL20A1Q9P218 1284 aa3.93□□□□□ -1.78
CCNL1-223ENST00000481173 ITGB1BP2Q9UKP3 347 aa3.93□□□□□ -1.78
CCNL1-223ENST00000481173 ASAP1Q9ULH1 1129 aa3.93□□□□□ -1.78
CCNL1-223ENST00000481173 EID1Q9Y6B2 187 aa3.93□□□□□ -1.78
CCNL1-223ENST00000481173 ISM1B1AKI9 464 aa3.92□□□□□ -1.78
CCNL1-223ENST00000481173 T-ENOLP0DO92 83 aa3.92□□□□□ -1.78
CCNL1-223ENST00000481173 YY1P25490 414 aa3.92□□□□□ -1.78
CCNL1-223ENST00000481173 KLRC1P26715 233 aa3.92□□□□□ -1.78
CCNL1-223ENST00000481173 THBS4P35443 961 aa3.92□□□□□ -1.78
CCNL1-223ENST00000481173 CFHR1Q03591 330 aa3.92□□□□□ -1.78
CCNL1-223ENST00000481173 DEUP1Q05D60 604 aa3.92□□□□□ -1.78
CCNL1-223ENST00000481173 KCNAB1Q14722 419 aa3.92□□□□□ -1.78
CCNL1-223ENST00000481173 KIAA0753Q2KHM9 967 aa3.92□□□□□ -1.78
CCNL1-223ENST00000481173 ZNF750Q32MQ0 723 aa3.92□□□□□ -1.78
CCNL1-223ENST00000481173 ZNF628Q5EBL2 1059 aa3.92□□□□□ -1.78
CCNL1-223ENST00000481173 DAB2IPQ5VWQ8 1189 aa3.92□□□□□ -1.78
CCNL1-223ENST00000481173 LVRNQ6Q4G3 990 aa3.92□□□□□ -1.78
CCNL1-223ENST00000481173 METTL25Q8N6Q8 603 aa3.92□□□□□ -1.78
CCNL1-223ENST00000481173 MAGEB6Q8N7X4 407 aa3.92□□□□□ -1.78
CCNL1-223ENST00000481173 FAM156AQ8NDB6 213 aa3.92□□□□□ -1.78
CCNL1-223ENST00000481173 HS6ST2Q96MM7 605 aa3.92□□□□□ -1.78
CCNL1-223ENST00000481173 CHST8Q9H2A9 424 aa3.92□□□□□ -1.78
CCNL1-223ENST00000481173 FAM204AQ9H8W3 233 aa3.92□□□□□ -1.78
CCNL1-223ENST00000481173 SNX15Q9NRS6 342 aa3.92□□□□□ -1.78
CCNL1-223ENST00000481173 AFF4Q9UHB7 1163 aaKnown RBP3.92□□□□□ -1.78
CCNL1-223ENST00000481173 MID2Q9UJV3 735 aa3.92□□□□□ -1.78
CCNL1-223ENST00000481173 OGDHLQ9ULD0 1010 aa3.92□□□□□ -1.78
CCNL1-223ENST00000481173 LOC105378220A0A1B0GUY1 285 aaPredicted RBP3.91□□□□□ -1.78
CCNL1-223ENST00000481173 CCP110O43303 1012 aa3.91□□□□□ -1.78
CCNL1-223ENST00000481173 TULP3O75386 442 aa3.91□□□□□ -1.78
CCNL1-223ENST00000481173 PARP1P09874 1014 aaKnown RBP3.91□□□□□ -1.78
CCNL1-223ENST00000481173 U2AF1L5P0DN76 240 aaPredicted RBP3.91□□□□□ -1.78
CCNL1-223ENST00000481173 CTSAP10619 480 aa3.91□□□□□ -1.78
CCNL1-223ENST00000481173 IL1R1P14778 569 aa3.91□□□□□ -1.78
CCNL1-223ENST00000481173 PHKG2P15735 406 aa3.91□□□□□ -1.78
CCNL1-223ENST00000481173 ATF7P17544 494 aaPredicted RBP3.91□□□□□ -1.78
CCNL1-223ENST00000481173 TPH1P17752 444 aa3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms