RNA–Protein interactions for RNA: ENST00000481131.5

UPF3A-207, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3A, Length 678 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-207ENST00000481131 SPATS1Q496A3 300 aa6.01□□□□□ -1.45
UPF3A-207ENST00000481131 TREML2Q5T2D2 321 aa6.01□□□□□ -1.45
UPF3A-207ENST00000481131 FNDC7Q5VTL7 733 aa6.01□□□□□ -1.45
UPF3A-207ENST00000481131 LVRNQ6Q4G3 990 aa6.01□□□□□ -1.45
UPF3A-207ENST00000481131 KLHL17Q6TDP4 642 aa6.01□□□□□ -1.45
UPF3A-207ENST00000481131 CYP26C1Q6V0L0 522 aa6.01□□□□□ -1.45
UPF3A-207ENST00000481131 CAND1Q86VP6 1230 aaKnown RBP6.01□□□□□ -1.45
UPF3A-207ENST00000481131 ANKRD18AQ8IVF6 992 aa6.01□□□□□ -1.45
UPF3A-207ENST00000481131 SLC44A2Q8IWA5 706 aaPredicted RBP6.01□□□□□ -1.45
UPF3A-207ENST00000481131 SUPT20HQ8NEM7 779 aa6.01□□□□□ -1.45
UPF3A-207ENST00000481131 TRIM63Q969Q1 353 aa6.01□□□□□ -1.45
UPF3A-207ENST00000481131 ZNF503Q96F45 646 aa6.01□□□□□ -1.45
UPF3A-207ENST00000481131 FAM167BQ9BTA0 163 aa6.01□□□□□ -1.45
UPF3A-207ENST00000481131 GLOD4Q9HC38 313 aa6.01□□□□□ -1.45
UPF3A-207ENST00000481131 CASS4Q9NQ75 786 aa6.01□□□□□ -1.45
UPF3A-207ENST00000481131 RRN3Q9NYV6 651 aa6.01□□□□□ -1.45
UPF3A-207ENST00000481131 C9orf78Q9NZ63 289 aaPredicted RBP6.01□□□□□ -1.45
UPF3A-207ENST00000481131 DAPP1Q9UN19 280 aa6.01□□□□□ -1.45
UPF3A-207ENST00000481131 USP22Q9UPT9 525 aa6.01□□□□□ -1.45
UPF3A-207ENST00000481131 FAM90A18PA6NE21 464 aa6□□□□□ -1.45
UPF3A-207ENST00000481131 FAM90A16PA6NEW6 464 aa6□□□□□ -1.45
UPF3A-207ENST00000481131 FAM90A9PA6NNJ1 464 aa6□□□□□ -1.45
UPF3A-207ENST00000481131 FAM90A5PA8MXJ8 464 aa6□□□□□ -1.45
UPF3A-207ENST00000481131 EXOC5O00471 708 aa6□□□□□ -1.45
UPF3A-207ENST00000481131 FAM155BO75949 473 aa6□□□□□ -1.45
UPF3A-207ENST00000481131 FESP07332 822 aa6□□□□□ -1.45
UPF3A-207ENST00000481131 IL6RP08887 468 aaPredicted RBP6□□□□□ -1.45
UPF3A-207ENST00000481131 FAM90A15PP0C7V4 464 aa6□□□□□ -1.45
UPF3A-207ENST00000481131 FAM90A14PP0C7W9 464 aa6□□□□□ -1.45
UPF3A-207ENST00000481131 CST5P28325 142 aaPredicted RBP6□□□□□ -1.45
UPF3A-207ENST00000481131 PCSK6P29122 969 aa6□□□□□ -1.45
UPF3A-207ENST00000481131 PBX1P40424 430 aa6□□□□□ -1.45
UPF3A-207ENST00000481131 PRKAA2P54646 552 aa6□□□□□ -1.45
UPF3A-207ENST00000481131 POU5F1BQ06416 359 aa6□□□□□ -1.45
UPF3A-207ENST00000481131 CLCA4Q14CN2 919 aa6□□□□□ -1.45
UPF3A-207ENST00000481131 ACOX1Q15067 660 aa6□□□□□ -1.45
UPF3A-207ENST00000481131 DPY19L3Q6ZPD9 716 aa6□□□□□ -1.45
UPF3A-207ENST00000481131 SYNE4Q8N205 404 aa6□□□□□ -1.45
UPF3A-207ENST00000481131 FSTL5Q8N475 847 aaPredicted RBP6□□□□□ -1.45
UPF3A-207ENST00000481131 HAS1Q92839 578 aa6□□□□□ -1.45
UPF3A-207ENST00000481131 RFKQ969G6 155 aa6□□□□□ -1.45
UPF3A-207ENST00000481131 UBXN10Q96LJ8 280 aa6□□□□□ -1.45
UPF3A-207ENST00000481131 Q96MF0 132 aa6□□□□□ -1.45
UPF3A-207ENST00000481131 NUDT22Q9BRQ3 303 aa6□□□□□ -1.45
UPF3A-207ENST00000481131 AIFM2Q9BRQ8 373 aa6□□□□□ -1.45
UPF3A-207ENST00000481131 WDR11Q9BZH6 1224 aa6□□□□□ -1.45
UPF3A-207ENST00000481131 SERHL2Q9H4I8 314 aa6□□□□□ -1.45
UPF3A-207ENST00000481131 TESQ9UGI8 421 aaKnown RBP6□□□□□ -1.45
UPF3A-207ENST00000481131 ERCC6L2Q5T890 1561 aa5.99□□□□□ -1.45
UPF3A-207ENST00000481131 PNMA6EA0A0J9YXQ4 647 aa5.99□□□□□ -1.45
UPF3A-207ENST00000481131 HMX3A6NHT5 357 aa5.99□□□□□ -1.45
UPF3A-207ENST00000481131 EIF3FO00303 357 aaPredicted RBP5.99□□□□□ -1.45
UPF3A-207ENST00000481131 YY2O15391 372 aa5.99□□□□□ -1.45
UPF3A-207ENST00000481131 IRAK2O43187 625 aa5.99□□□□□ -1.45
UPF3A-207ENST00000481131 CHRM2P08172 466 aa5.99□□□□□ -1.45
UPF3A-207ENST00000481131 AKT1P31749 480 aa5.99□□□□□ -1.45
UPF3A-207ENST00000481131 MAPK9P45984 424 aa5.99□□□□□ -1.45
UPF3A-207ENST00000481131 POLE2P56282 527 aa5.99□□□□□ -1.45
UPF3A-207ENST00000481131 AP2B1P63010 937 aa5.99□□□□□ -1.45
UPF3A-207ENST00000481131 FOXE3Q13461 319 aa5.99□□□□□ -1.45
UPF3A-207ENST00000481131 TUBA3CQ13748 450 aa5.99□□□□□ -1.45
UPF3A-207ENST00000481131 CYP1B1Q16678 543 aa5.99□□□□□ -1.45
UPF3A-207ENST00000481131 TXNRD1Q16881 649 aa5.99□□□□□ -1.45
UPF3A-207ENST00000481131 TRIM60Q495X7 471 aa5.99□□□□□ -1.45
UPF3A-207ENST00000481131 ALFQ53S48 1182 aa5.99□□□□□ -1.45
UPF3A-207ENST00000481131 RINT1Q6NUQ1 792 aa5.99□□□□□ -1.45
UPF3A-207ENST00000481131 MSANTD2Q6P1R3 559 aa5.99□□□□□ -1.45
UPF3A-207ENST00000481131 TUBA3EQ6PEY2 450 aa5.99□□□□□ -1.45
UPF3A-207ENST00000481131 KCNV1Q6PIU1 500 aa5.99□□□□□ -1.45
UPF3A-207ENST00000481131 PIK3AP1Q6ZUJ8 805 aa5.99□□□□□ -1.45
UPF3A-207ENST00000481131 NRSN1Q8IZ57 195 aa5.99□□□□□ -1.45
UPF3A-207ENST00000481131 SPPL3Q8TCT6 385 aa5.99□□□□□ -1.45
UPF3A-207ENST00000481131 PROKR1Q8TCW9 393 aa5.99□□□□□ -1.45
UPF3A-207ENST00000481131 RSC1A1Q92681 617 aa5.99□□□□□ -1.45
UPF3A-207ENST00000481131 MCRS1Q96EZ8 462 aa5.99□□□□□ -1.45
UPF3A-207ENST00000481131 PGBD1Q96JS3 809 aa5.99□□□□□ -1.45
UPF3A-207ENST00000481131 ZCWPW1Q9H0M4 648 aa5.99□□□□□ -1.45
UPF3A-207ENST00000481131 KLC4Q9NSK0 619 aa5.99□□□□□ -1.45
UPF3A-207ENST00000481131 SHROOM2Q13796 1616 aa5.99□□□□□ -1.45
UPF3A-207ENST00000481131 NUP160Q12769 1436 aa5.99□□□□□ -1.45
UPF3A-207ENST00000481131 NCAM2O15394 837 aa5.98□□□□□ -1.45
UPF3A-207ENST00000481131 SPRY2O43597 315 aa5.98□□□□□ -1.45
UPF3A-207ENST00000481131 RPP40O75818 363 aaKnown RBP5.98□□□□□ -1.45
UPF3A-207ENST00000481131 WDR47O94967 919 aa5.98□□□□□ -1.45
UPF3A-207ENST00000481131 CKMT1AP12532 417 aa5.98□□□□□ -1.45
UPF3A-207ENST00000481131 INSRRP14616 1297 aa5.98□□□□□ -1.45
UPF3A-207ENST00000481131 ITPKBP27987 946 aa5.98□□□□□ -1.45
UPF3A-207ENST00000481131 PTGS2P35354 604 aa5.98□□□□□ -1.45
UPF3A-207ENST00000481131 ADD2P35612 726 aa5.98□□□□□ -1.45
UPF3A-207ENST00000481131 ZEB1P37275 1124 aaPredicted RBP5.98□□□□□ -1.45
UPF3A-207ENST00000481131 MTHFSP49914 203 aa5.98□□□□□ -1.45
UPF3A-207ENST00000481131 CUL4BQ13620 913 aa5.98□□□□□ -1.45
UPF3A-207ENST00000481131 TMEM196Q5HYL7 178 aa5.98□□□□□ -1.45
UPF3A-207ENST00000481131 MIIPQ5JXC2 388 aa5.98□□□□□ -1.45
UPF3A-207ENST00000481131 ZNF618Q5T7W0 954 aa5.98□□□□□ -1.45
UPF3A-207ENST00000481131 ABHD17BQ5VST6 288 aa5.98□□□□□ -1.45
UPF3A-207ENST00000481131 KIAA0895LQ68EN5 471 aa5.98□□□□□ -1.45
UPF3A-207ENST00000481131 GRHL2Q6ISB3 625 aa5.98□□□□□ -1.45
UPF3A-207ENST00000481131 SPRED1Q7Z699 444 aa5.98□□□□□ -1.45
UPF3A-207ENST00000481131 HERC6Q8IVU3 1022 aa5.98□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms