RNA–Protein interactions for RNA: ENST00000480952.1

NDC1-202, Transcript of NDC1 transmembrane nucleoporin, humanhuman

TSL 3

Gene NDC1, Length 785 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDC1-202ENST00000480952 CCSER2Q9H7U1 834 aa14.19□□□□□ -0.14
NDC1-202ENST00000480952 CACNA2D2Q9NY47 1150 aa14.19□□□□□ -0.14
NDC1-202ENST00000480952 WDR35Q9P2L0 1181 aa14.19□□□□□ -0.14
NDC1-202ENST00000480952 HELZP42694 1942 aaKnown RBP14.19□□□□□ -0.14
NDC1-202ENST00000480952 A0A087WV48 116 aa14.18□□□□□ -0.14
NDC1-202ENST00000480952 PRRT4C9JH25 899 aa14.18□□□□□ -0.14
NDC1-202ENST00000480952 CLDN5O00501 218 aa14.18□□□□□ -0.14
NDC1-202ENST00000480952 BCAT2O15382 392 aaPredicted RBP14.18□□□□□ -0.14
NDC1-202ENST00000480952 PRPF6O94906 941 aaKnown RBP14.18□□□□□ -0.14
NDC1-202ENST00000480952 PRB1P04280 392 aa14.18□□□□□ -0.14
NDC1-202ENST00000480952 TYRP14679 529 aa14.18□□□□□ -0.14
NDC1-202ENST00000480952 GRIN1Q05586 938 aa14.18□□□□□ -0.14
NDC1-202ENST00000480952 SURF1Q15526 300 aa14.18□□□□□ -0.14
NDC1-202ENST00000480952 HLA-BQ31612 363 aa14.18□□□□□ -0.14
NDC1-202ENST00000480952 GPD1LQ8N335 351 aa14.18□□□□□ -0.14
NDC1-202ENST00000480952 CADM4Q8NFZ8 388 aa14.18□□□□□ -0.14
NDC1-202ENST00000480952 WBP2Q969T9 261 aa14.18□□□□□ -0.14
NDC1-202ENST00000480952 DUSP9Q99956 384 aaKnown RBP14.18□□□□□ -0.14
NDC1-202ENST00000480952 B3GNT5Q9BYG0 378 aa14.18□□□□□ -0.14
NDC1-202ENST00000480952 DPEP3Q9H4B8 488 aa14.18□□□□□ -0.14
NDC1-202ENST00000480952 TMEM30AQ9NV96 361 aa14.18□□□□□ -0.14
NDC1-202ENST00000480952 TOR4AQ9NXH8 423 aa14.18□□□□□ -0.14
NDC1-202ENST00000480952 WSB2Q9NYS7 404 aaPredicted RBP14.18□□□□□ -0.14
NDC1-202ENST00000480952 FNDC3AQ9Y2H6 1198 aaKnown RBP14.18□□□□□ -0.14
NDC1-202ENST00000480952 NFE2L3Q9Y4A8 694 aa14.18□□□□□ -0.14
NDC1-202ENST00000480952 URB1O60287 2271 aaKnown RBP14.18□□□□□ -0.14
NDC1-202ENST00000480952 HELZ2Q9BYK8 2649 aaKnown RBP14.18□□□□□ -0.14
NDC1-202ENST00000480952 BPTFQ12830 3046 aa14.17□□□□□ -0.14
NDC1-202ENST00000480952 PTPRJQ12913 1337 aa14.17□□□□□ -0.14
NDC1-202ENST00000480952 PLXNB3Q9ULL4 1909 aa14.17□□□□□ -0.14
NDC1-202ENST00000480952 ASH1LQ9NR48 2969 aaKnown RBP14.17□□□□□ -0.14
NDC1-202ENST00000480952 ASXL3Q9C0F0 2248 aa14.17□□□□□ -0.14
NDC1-202ENST00000480952 FAM149AA5PLN7 773 aa14.17□□□□□ -0.14
NDC1-202ENST00000480952 ZNF233A6NK53 670 aa14.17□□□□□ -0.14
NDC1-202ENST00000480952 WASH3PC4AMC7 463 aa14.17□□□□□ -0.14
NDC1-202ENST00000480952 GFRA2O00451 464 aa14.17□□□□□ -0.14
NDC1-202ENST00000480952 FLRT2O43155 660 aa14.17□□□□□ -0.14
NDC1-202ENST00000480952 CACNG3O60359 315 aa14.17□□□□□ -0.14
NDC1-202ENST00000480952 TACC1O75410 805 aa14.17□□□□□ -0.14
NDC1-202ENST00000480952 DGKGP49619 791 aa14.17□□□□□ -0.14
NDC1-202ENST00000480952 TUBP50607 506 aa14.17□□□□□ -0.14
NDC1-202ENST00000480952 CASP5P51878 434 aa14.17□□□□□ -0.14
NDC1-202ENST00000480952 STARD3Q14849 445 aa14.17□□□□□ -0.14
NDC1-202ENST00000480952 SUZ12Q15022 739 aaKnown RBP14.17□□□□□ -0.14
NDC1-202ENST00000480952 DCAF12L1Q5VU92 463 aa14.17□□□□□ -0.14
NDC1-202ENST00000480952 SNX30Q5VWJ9 437 aa14.17□□□□□ -0.14
NDC1-202ENST00000480952 TPGS1Q6ZTW0 290 aa14.17□□□□□ -0.14
NDC1-202ENST00000480952 METTL3Q86U44 580 aaKnown RBP14.17□□□□□ -0.14
NDC1-202ENST00000480952 PDCD7Q8N8D1 485 aaKnown RBP14.17□□□□□ -0.14
NDC1-202ENST00000480952 SCAMP5Q8TAC9 235 aa14.17□□□□□ -0.14
NDC1-202ENST00000480952 DCBLD2Q96PD2 775 aa14.17□□□□□ -0.14
NDC1-202ENST00000480952 KCNK16Q96T55 309 aa14.17□□□□□ -0.14
NDC1-202ENST00000480952 ITM2CQ9NQX7 267 aa14.17□□□□□ -0.14
NDC1-202ENST00000480952 NME7Q9Y5B8 376 aa14.17□□□□□ -0.14
NDC1-202ENST00000480952 PCDHGB2Q9Y5G2 931 aa14.17□□□□□ -0.14
NDC1-202ENST00000480952 MYOFQ9NZM1 2061 aa14.17□□□□□ -0.14
NDC1-202ENST00000480952 MYO18AQ92614 2054 aaKnown RBP14.16□□□□□ -0.14
NDC1-202ENST00000480952 CEP192Q8TEP8 1941 aa14.16□□□□□ -0.14
NDC1-202ENST00000480952 METTL12A8MUP2 240 aa14.16□□□□□ -0.14
NDC1-202ENST00000480952 A8MXQ7 604 aa14.16□□□□□ -0.14
NDC1-202ENST00000480952 DKK1O94907 266 aa14.16□□□□□ -0.14
NDC1-202ENST00000480952 BMP15O95972 392 aa14.16□□□□□ -0.14
NDC1-202ENST00000480952 FAM163BP0C2L3 166 aa14.16□□□□□ -0.14
NDC1-202ENST00000480952 IDEP14735 1019 aa14.16□□□□□ -0.14
NDC1-202ENST00000480952 OXTRP30559 389 aa14.16□□□□□ -0.14
NDC1-202ENST00000480952 ABCG1P45844 678 aa14.16□□□□□ -0.14
NDC1-202ENST00000480952 TNNC1P63316 161 aa14.16□□□□□ -0.14
NDC1-202ENST00000480952 ALCAMQ13740 583 aa14.16□□□□□ -0.14
NDC1-202ENST00000480952 CCDC157Q569K6 752 aa14.16□□□□□ -0.14
NDC1-202ENST00000480952 DBX2Q6ZNG2 339 aa14.16□□□□□ -0.14
NDC1-202ENST00000480952 HTR3DQ70Z44 454 aa14.16□□□□□ -0.14
NDC1-202ENST00000480952 SV2BQ7L1I2 683 aa14.16□□□□□ -0.14
NDC1-202ENST00000480952 TRAPPC11Q7Z392 1133 aa14.16□□□□□ -0.14
NDC1-202ENST00000480952 B3GALNT2Q8NCR0 500 aa14.16□□□□□ -0.14
NDC1-202ENST00000480952 BAHD1Q8TBE0 780 aaPredicted RBP14.16□□□□□ -0.14
NDC1-202ENST00000480952 SLC39A7Q92504 469 aa14.16□□□□□ -0.14
NDC1-202ENST00000480952 MED10Q9BTT4 135 aa14.16□□□□□ -0.14
NDC1-202ENST00000480952 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.16□□□□□ -0.144e-6■■■■■ 55.2
NDC1-202ENST00000480952 GMIPQ9P107 970 aa14.16□□□□□ -0.14
NDC1-202ENST00000480952 CCDC39Q9UFE4 941 aa14.16□□□□□ -0.14
NDC1-202ENST00000480952 STON1Q9Y6Q2 735 aa14.16□□□□□ -0.14
NDC1-202ENST00000480952 TK2O00142 265 aa14.15□□□□□ -0.14
NDC1-202ENST00000480952 KIAA0391O15091 583 aaKnown RBP14.15□□□□□ -0.14
NDC1-202ENST00000480952 CST3P01034 146 aaPredicted RBP14.15□□□□□ -0.14
NDC1-202ENST00000480952 SLC5A3P53794 718 aa14.15□□□□□ -0.14
NDC1-202ENST00000480952 BNC1Q01954 994 aa14.15□□□□□ -0.14
NDC1-202ENST00000480952 CAMK2BQ13554 666 aa14.15□□□□□ -0.14
NDC1-202ENST00000480952 WDR72Q3MJ13 1102 aa14.15□□□□□ -0.14
NDC1-202ENST00000480952 FUT11Q495W5 492 aa14.15□□□□□ -0.14
NDC1-202ENST00000480952 CBWD2Q8IUF1 395 aa14.15□□□□□ -0.14
NDC1-202ENST00000480952 WDR49Q8IV35 697 aa14.15□□□□□ -0.14
NDC1-202ENST00000480952 PIP4K2CQ8TBX8 421 aa14.15□□□□□ -0.14
NDC1-202ENST00000480952 DNAJC19Q96DA6 116 aa14.15□□□□□ -0.14
NDC1-202ENST00000480952 EPSTI1Q96J88 318 aa14.15□□□□□ -0.14
NDC1-202ENST00000480952 OLFML3Q9NRN5 406 aa14.15□□□□□ -0.14
NDC1-202ENST00000480952 USP36Q9P275 1121 aaKnown RBP14.15□□□□□ -0.14
NDC1-202ENST00000480952 STK17AQ9UEE5 414 aa14.15□□□□□ -0.14
NDC1-202ENST00000480952 EIF2B4Q9UI10 523 aaKnown RBP14.15□□□□□ -0.14
NDC1-202ENST00000480952 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.15□□□□□ -0.14
NDC1-202ENST00000480952 ATP8B3O60423 1300 aa14.15□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms