RNA–Protein interactions for RNA: ENST00000480525.5

HDAC6-223, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 412 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-223ENST00000480525 FGF14Q92915 247 aa5.34□□□□□ -1.55
HDAC6-223ENST00000480525 KAT5Q92993 513 aa5.34□□□□□ -1.55
HDAC6-223ENST00000480525 ATP2A3Q93084 1043 aa5.34□□□□□ -1.55
HDAC6-223ENST00000480525 FBXO32Q969P5 355 aa5.34□□□□□ -1.55
HDAC6-223ENST00000480525 TRIM11Q96F44 468 aa5.34□□□□□ -1.55
HDAC6-223ENST00000480525 ZFRQ96KR1 1074 aaKnown RBP5.34□□□□□ -1.55
HDAC6-223ENST00000480525 SERPINB11Q96P15 392 aa5.34□□□□□ -1.55
HDAC6-223ENST00000480525 SLC2A13Q96QE2 648 aa5.34□□□□□ -1.55
HDAC6-223ENST00000480525 EIF3CQ99613 913 aaKnown RBP5.34□□□□□ -1.55
HDAC6-223ENST00000480525 LPIN3Q9BQK8 851 aa5.34□□□□□ -1.55
HDAC6-223ENST00000480525 TRMT61BQ9BVS5 477 aaKnown RBP5.34□□□□□ -1.55
HDAC6-223ENST00000480525 LSM14BQ9BX40 385 aaKnown RBP5.34□□□□□ -1.55
HDAC6-223ENST00000480525 ATXN3LQ9H3M9 355 aa5.34□□□□□ -1.55
HDAC6-223ENST00000480525 SMOC2Q9H3U7 446 aa5.34□□□□□ -1.55
HDAC6-223ENST00000480525 C8orf33Q9H7E9 229 aaPredicted RBP5.34□□□□□ -1.55
HDAC6-223ENST00000480525 POPDC2Q9HBU9 364 aa5.34□□□□□ -1.55
HDAC6-223ENST00000480525 FAM207AQ9NSI2 230 aaPredicted RBP5.34□□□□□ -1.55
HDAC6-223ENST00000480525 HCFC1R1Q9NWW0 138 aa5.34□□□□□ -1.55
HDAC6-223ENST00000480525 DNMT3LQ9UJW3 386 aa5.34□□□□□ -1.55
HDAC6-223ENST00000480525 MRPS17Q9Y2R5 130 aaKnown RBP5.34□□□□□ -1.55
HDAC6-223ENST00000480525 LUC7L2Q9Y383 392 aaKnown RBP5.34□□□□□ -1.55
HDAC6-223ENST00000480525 NUMBLQ9Y6R0 609 aa5.34□□□□□ -1.55
HDAC6-223ENST00000480525 CKAP5Q14008 2032 aa5.34□□□□□ -1.55
HDAC6-223ENST00000480525 SPAG17Q6Q759 2223 aa5.33□□□□□ -1.56
HDAC6-223ENST00000480525 CACNA1IQ9P0X4 2223 aa5.33□□□□□ -1.56
HDAC6-223ENST00000480525 MUC6Q6W4X9 2439 aa5.33□□□□□ -1.56
HDAC6-223ENST00000480525 GFRA2O00451 464 aa5.33□□□□□ -1.56
HDAC6-223ENST00000480525 CLDN5O00501 218 aa5.33□□□□□ -1.56
HDAC6-223ENST00000480525 NPC1O15118 1278 aa5.33□□□□□ -1.56
HDAC6-223ENST00000480525 EPHB6O15197 1021 aa5.33□□□□□ -1.56
HDAC6-223ENST00000480525 TEX33O43247 280 aa5.33□□□□□ -1.56
HDAC6-223ENST00000480525 HOXC11O43248 304 aaPredicted RBP5.33□□□□□ -1.56
HDAC6-223ENST00000480525 COCHO43405 550 aa5.33□□□□□ -1.56
HDAC6-223ENST00000480525 THAP12O43422 761 aa5.33□□□□□ -1.56
HDAC6-223ENST00000480525 GREM1O60565 184 aa5.33□□□□□ -1.56
HDAC6-223ENST00000480525 ENDOD1O94919 500 aa5.33□□□□□ -1.56
HDAC6-223ENST00000480525 CLSTN1O94985 981 aa5.33□□□□□ -1.56
HDAC6-223ENST00000480525 PAPSS2O95340 614 aaPredicted RBP5.33□□□□□ -1.56
HDAC6-223ENST00000480525 NFATC1O95644 943 aa5.33□□□□□ -1.56
HDAC6-223ENST00000480525 F9P00740 461 aa5.33□□□□□ -1.56
HDAC6-223ENST00000480525 LTFP02788 710 aa5.33□□□□□ -1.56
HDAC6-223ENST00000480525 GYPCP04921 128 aa5.33□□□□□ -1.56
HDAC6-223ENST00000480525 SERPING1P05155 500 aa5.33□□□□□ -1.56
HDAC6-223ENST00000480525 CALB1P05937 261 aa5.33□□□□□ -1.56
HDAC6-223ENST00000480525 CKMP06732 381 aa5.33□□□□□ -1.56
HDAC6-223ENST00000480525 TPM1P09493 284 aa5.33□□□□□ -1.56
HDAC6-223ENST00000480525 MYL4P12829 197 aa5.33□□□□□ -1.56
HDAC6-223ENST00000480525 ADORA2BP29275 332 aa5.33□□□□□ -1.56
HDAC6-223ENST00000480525 HOXA6P31267 233 aa5.33□□□□□ -1.56
HDAC6-223ENST00000480525 HTR7P34969 479 aa5.33□□□□□ -1.56
HDAC6-223ENST00000480525 PTPN9P43378 593 aa5.33□□□□□ -1.56
HDAC6-223ENST00000480525 VASPP50552 380 aaPredicted RBP5.33□□□□□ -1.56
HDAC6-223ENST00000480525 ZNF135P52742 658 aaPredicted RBP5.33□□□□□ -1.56
HDAC6-223ENST00000480525 YWHAGP61981 247 aaKnown RBP eCLIP5.33□□□□□ -1.56
HDAC6-223ENST00000480525 FMO1Q01740 532 aa5.33□□□□□ -1.56
HDAC6-223ENST00000480525 NRG1Q02297 640 aaPredicted RBP5.33□□□□□ -1.56
HDAC6-223ENST00000480525 ADIGQ0VDE8 80 aa5.33□□□□□ -1.56
HDAC6-223ENST00000480525 LRMPQ12912 555 aa5.33□□□□□ -1.56
HDAC6-223ENST00000480525 TBX2Q13207 712 aaPredicted RBP5.33□□□□□ -1.56
HDAC6-223ENST00000480525 MAPK8IP2Q13387 824 aaPredicted RBP5.33□□□□□ -1.56
HDAC6-223ENST00000480525 RAPGEF1Q13905 1077 aa5.33□□□□□ -1.56
HDAC6-223ENST00000480525 PPP2R5DQ14738 602 aa5.33□□□□□ -1.56
HDAC6-223ENST00000480525 MTF1Q14872 753 aa5.33□□□□□ -1.56
HDAC6-223ENST00000480525 TCEAL1Q15170 157 aa5.33□□□□□ -1.56
HDAC6-223ENST00000480525 TRIP4Q15650 581 aaPredicted RBP5.33□□□□□ -1.56
HDAC6-223ENST00000480525 CLUL1Q15846 466 aa5.33□□□□□ -1.56
HDAC6-223ENST00000480525 C5orf22Q49AR2 442 aa5.33□□□□□ -1.56
HDAC6-223ENST00000480525 FBXO43Q4G163 708 aa5.33□□□□□ -1.56
HDAC6-223ENST00000480525 ZNF394Q53GI3 561 aa5.33□□□□□ -1.56
HDAC6-223ENST00000480525 BRMS1LQ5PSV4 323 aa5.33□□□□□ -1.56
HDAC6-223ENST00000480525 C10orf76Q5T2E6 689 aa5.33□□□□□ -1.56
HDAC6-223ENST00000480525 GPR158Q5T848 1215 aa5.33□□□□□ -1.56
HDAC6-223ENST00000480525 TTC39BQ5VTQ0 682 aaPredicted RBP5.33□□□□□ -1.56
HDAC6-223ENST00000480525 OLFML1Q6UWY5 402 aa5.33□□□□□ -1.56
HDAC6-223ENST00000480525 VITQ6UXI7 678 aa5.33□□□□□ -1.56
HDAC6-223ENST00000480525 Q6ZNB5 142 aa5.33□□□□□ -1.56
HDAC6-223ENST00000480525 TRIM67Q6ZTA4 783 aa5.33□□□□□ -1.56
HDAC6-223ENST00000480525 SCD5Q86SK9 330 aa5.33□□□□□ -1.56
HDAC6-223ENST00000480525 NOP9Q86U38 636 aaKnown RBP5.33□□□□□ -1.56
HDAC6-223ENST00000480525 SLC47A2Q86VL8 602 aa5.33□□□□□ -1.56
HDAC6-223ENST00000480525 VPS36Q86VN1 386 aa5.33□□□□□ -1.56
HDAC6-223ENST00000480525 PSTKQ8IV42 348 aaKnown RBP5.33□□□□□ -1.56
HDAC6-223ENST00000480525 UNC45BQ8IWX7 931 aa5.33□□□□□ -1.56
HDAC6-223ENST00000480525 HS6ST3Q8IZP7 471 aa5.33□□□□□ -1.56
HDAC6-223ENST00000480525 WDTC1Q8N5D0 677 aa5.33□□□□□ -1.56
HDAC6-223ENST00000480525 C3orf20Q8ND61 904 aa5.33□□□□□ -1.56
HDAC6-223ENST00000480525 SCAMP5Q8TAC9 235 aa5.33□□□□□ -1.56
HDAC6-223ENST00000480525 USP13Q92995 863 aaPredicted RBP5.33□□□□□ -1.56
HDAC6-223ENST00000480525 SECISBP2LQ93073 1101 aaKnown RBP5.33□□□□□ -1.56
HDAC6-223ENST00000480525 CLDN23Q96B33 292 aa5.33□□□□□ -1.56
HDAC6-223ENST00000480525 C18orf8Q96DM3 657 aa5.33□□□□□ -1.56
HDAC6-223ENST00000480525 TCEAL4Q96EI5 215 aa5.33□□□□□ -1.56
HDAC6-223ENST00000480525 MCRS1Q96EZ8 462 aa5.33□□□□□ -1.56
HDAC6-223ENST00000480525 ASIC4Q96FT7 647 aa5.33□□□□□ -1.56
HDAC6-223ENST00000480525 SLC39A13Q96H72 371 aa5.33□□□□□ -1.56
HDAC6-223ENST00000480525 RPGRIP1Q96KN7 1286 aa5.33□□□□□ -1.56
HDAC6-223ENST00000480525 PPP1R13BQ96KQ4 1090 aa5.33□□□□□ -1.56
HDAC6-223ENST00000480525 NAP1L5Q96NT1 182 aaPredicted RBP5.33□□□□□ -1.56
HDAC6-223ENST00000480525 KLF16Q9BXK1 252 aaPredicted RBP5.33□□□□□ -1.56
HDAC6-223ENST00000480525 COL25A1Q9BXS0 654 aaPredicted RBP5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms