RNA–Protein interactions for RNA: ENST00000480484.5

COMMD4-203, Transcript of COMM domain containing 4, humanhuman

TSL 1 (best)

Gene COMMD4, Length 3,225 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-203ENST00000480484 PANX3Q96QZ0 392 aa10.54□□□□□ -0.72
COMMD4-203ENST00000480484 SMYD3Q9H7B4 428 aa10.54□□□□□ -0.72
COMMD4-203ENST00000480484 TUFT1Q9NNX1 390 aa10.54□□□□□ -0.72
COMMD4-203ENST00000480484 DDX18Q9NVP1 670 aaKnown RBP10.54□□□□□ -0.72
COMMD4-203ENST00000480484 MARCOQ9UEW3 520 aaPredicted RBP10.54□□□□□ -0.72
COMMD4-203ENST00000480484 PFDN2Q9UHV9 154 aa10.54□□□□□ -0.72
COMMD4-203ENST00000480484 TMCO1Q9UM00 188 aa10.54□□□□□ -0.72
COMMD4-203ENST00000480484 EFR3BQ9Y2G0 817 aa10.54□□□□□ -0.72
COMMD4-203ENST00000480484 ZNF536O15090 1300 aa10.54□□□□□ -0.72
COMMD4-203ENST00000480484 ATP2A1O14983 1001 aa10.54□□□□□ -0.72
COMMD4-203ENST00000480484 FDX1P10109 184 aa10.54□□□□□ -0.72
COMMD4-203ENST00000480484 CAP2P40123 477 aa10.54□□□□□ -0.72
COMMD4-203ENST00000480484 CENPCQ03188 943 aa10.54□□□□□ -0.72
COMMD4-203ENST00000480484 MED21Q13503 144 aa10.54□□□□□ -0.72
COMMD4-203ENST00000480484 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.54□□□□□ -0.72
COMMD4-203ENST00000480484 DMAC2Q9NW81 257 aa10.54□□□□□ -0.72
COMMD4-203ENST00000480484 DDX43Q9NXZ2 648 aaKnown RBP10.54□□□□□ -0.72
COMMD4-203ENST00000480484 DNPEPQ9ULA0 475 aa10.54□□□□□ -0.72
COMMD4-203ENST00000480484 CCPG1Q9ULG6 757 aa10.54□□□□□ -0.72
COMMD4-203ENST00000480484 DPEP1P16444 411 aa10.53□□□□□ -0.72
COMMD4-203ENST00000480484 PIN1Q13526 163 aaPredicted RBP10.53□□□□□ -0.72
COMMD4-203ENST00000480484 CCNG2Q16589 344 aa10.53□□□□□ -0.72
COMMD4-203ENST00000480484 LPCAT4Q643R3 524 aa10.53□□□□□ -0.72
COMMD4-203ENST00000480484 EEPD1Q7L9B9 569 aa10.53□□□□□ -0.72
COMMD4-203ENST00000480484 FAM71AQ8IYT1 594 aa10.53□□□□□ -0.72
COMMD4-203ENST00000480484 HAPLN3Q96S86 360 aa10.53□□□□□ -0.72
COMMD4-203ENST00000480484 PHACTR1Q9C0D0 580 aa10.53□□□□□ -0.72
COMMD4-203ENST00000480484 MIS12Q9H081 205 aa10.53□□□□□ -0.72
COMMD4-203ENST00000480484 KCNK13Q9HB14 408 aa10.53□□□□□ -0.72
COMMD4-203ENST00000480484 MRPL11Q9Y3B7 192 aaKnown RBP10.53□□□□□ -0.72
COMMD4-203ENST00000480484 ASTN2O75129 1339 aaPredicted RBP10.53□□□□□ -0.72
COMMD4-203ENST00000480484 MEI4A8MW99 385 aa10.53□□□□□ -0.72
COMMD4-203ENST00000480484 DNALI1O14645 258 aaPredicted RBP10.53□□□□□ -0.72
COMMD4-203ENST00000480484 LPXNO60711 386 aa10.53□□□□□ -0.72
COMMD4-203ENST00000480484 DESP17661 470 aa10.53□□□□□ -0.72
COMMD4-203ENST00000480484 ADSSP30520 456 aa10.53□□□□□ -0.72
COMMD4-203ENST00000480484 GRIA2P42262 883 aa10.53□□□□□ -0.72
COMMD4-203ENST00000480484 SP4Q02446 784 aa10.53□□□□□ -0.72
COMMD4-203ENST00000480484 TMED1Q13445 227 aa10.53□□□□□ -0.72
COMMD4-203ENST00000480484 WDR45BQ5MNZ6 344 aa10.53□□□□□ -0.72
COMMD4-203ENST00000480484 AGAP9Q5VTM2 703 aa10.53□□□□□ -0.72
COMMD4-203ENST00000480484 ACAD10Q6JQN1 1059 aa10.53□□□□□ -0.72
COMMD4-203ENST00000480484 CENPUQ71F23 418 aa10.53□□□□□ -0.72
COMMD4-203ENST00000480484 TDRPQ86YL5 185 aa10.53□□□□□ -0.72
COMMD4-203ENST00000480484 ULK2Q8IYT8 1036 aa10.53□□□□□ -0.72
COMMD4-203ENST00000480484 TTLL6Q8N841 843 aa10.53□□□□□ -0.72
COMMD4-203ENST00000480484 SMC1BQ8NDV3 1235 aa10.53□□□□□ -0.72
COMMD4-203ENST00000480484 CHURC1Q8WUH1 139 aa10.53□□□□□ -0.72
COMMD4-203ENST00000480484 NCSTNQ92542 709 aa10.53□□□□□ -0.72
COMMD4-203ENST00000480484 YIPF4Q9BSR8 244 aa10.53□□□□□ -0.72
COMMD4-203ENST00000480484 NIF3L1Q9GZT8 377 aa10.53□□□□□ -0.72
COMMD4-203ENST00000480484 RAVER2Q9HCJ3 691 aaKnown RBP10.53□□□□□ -0.72
COMMD4-203ENST00000480484 MAFFQ9ULX9 164 aa10.53□□□□□ -0.72
COMMD4-203ENST00000480484 COL2A1P02458 1487 aaPredicted RBP10.53□□□□□ -0.72
COMMD4-203ENST00000480484 ITGA2BP08514 1039 aa10.52□□□□□ -0.72
COMMD4-203ENST00000480484 KLRC2P26717 231 aa10.52□□□□□ -0.72
COMMD4-203ENST00000480484 GNA15P30679 374 aa10.52□□□□□ -0.72
COMMD4-203ENST00000480484 SLC18A1P54219 525 aa10.52□□□□□ -0.72
COMMD4-203ENST00000480484 ALDH18A1P54886 795 aaKnown RBP10.52□□□□□ -0.72
COMMD4-203ENST00000480484 MFAP3P55082 362 aa10.52□□□□□ -0.72
COMMD4-203ENST00000480484 ALCAMQ13740 583 aa10.52□□□□□ -0.72
COMMD4-203ENST00000480484 R3HDM1Q15032 1099 aaKnown RBP10.52□□□□□ -0.72
COMMD4-203ENST00000480484 ZNF354CQ86Y25 554 aa10.52□□□□□ -0.72
COMMD4-203ENST00000480484 TREML1Q86YW5 311 aa10.52□□□□□ -0.72
COMMD4-203ENST00000480484 TMPRSS6Q8IU80 811 aa10.52□□□□□ -0.72
COMMD4-203ENST00000480484 KCT2Q8NC54 265 aa10.52□□□□□ -0.72
COMMD4-203ENST00000480484 GSTCDQ8NEC7 633 aa10.52□□□□□ -0.72
COMMD4-203ENST00000480484 OR6Y1Q8NGX8 325 aa10.52□□□□□ -0.72
COMMD4-203ENST00000480484 TRPM4Q8TD43 1214 aa10.52□□□□□ -0.72
COMMD4-203ENST00000480484 LENG1Q96BZ8 264 aaPredicted RBP10.52□□□□□ -0.72
COMMD4-203ENST00000480484 PAFAH2Q99487 392 aa10.52□□□□□ -0.72
COMMD4-203ENST00000480484 TRIM56Q9BRZ2 755 aaKnown RBP10.52□□□□□ -0.72
COMMD4-203ENST00000480484 TEKT3Q9BXF9 490 aa10.52□□□□□ -0.72
COMMD4-203ENST00000480484 KCNH7Q9NS40 1196 aa10.52□□□□□ -0.72
COMMD4-203ENST00000480484 SLC7A8Q9UHI5 535 aa10.52□□□□□ -0.72
COMMD4-203ENST00000480484 FZD1Q9UP38 647 aa10.52□□□□□ -0.72
COMMD4-203ENST00000480484 ARHGEF35A5YM69 484 aa10.52□□□□□ -0.73
COMMD4-203ENST00000480484 PDLIM1O00151 329 aa10.52□□□□□ -0.73
COMMD4-203ENST00000480484 GRIN3BO60391 1043 aa10.52□□□□□ -0.73
COMMD4-203ENST00000480484 IL33O95760 270 aa10.52□□□□□ -0.73
COMMD4-203ENST00000480484 MT-ND3P03897 115 aa10.52□□□□□ -0.73
COMMD4-203ENST00000480484 ASLP04424 464 aa10.52□□□□□ -0.73
COMMD4-203ENST00000480484 DLDP09622 509 aaKnown RBP10.52□□□□□ -0.73
COMMD4-203ENST00000480484 COL9A1P20849 921 aa10.52□□□□□ -0.73
COMMD4-203ENST00000480484 SLC1A1P43005 524 aa10.52□□□□□ -0.73
COMMD4-203ENST00000480484 C3orf62Q6ZUJ4 267 aa10.52□□□□□ -0.73
COMMD4-203ENST00000480484 MYLK4Q86YV6 388 aaPredicted RBP10.52□□□□□ -0.73
COMMD4-203ENST00000480484 RBM12BQ8IXT5 1001 aaKnown RBP10.52□□□□□ -0.73
COMMD4-203ENST00000480484 MIPOL1Q8TD10 442 aa10.52□□□□□ -0.73
COMMD4-203ENST00000480484 SLC26A7Q8TE54 656 aa10.52□□□□□ -0.73
COMMD4-203ENST00000480484 PYROXD1Q8WU10 500 aa10.52□□□□□ -0.73
COMMD4-203ENST00000480484 CCDC124Q96CT7 223 aaKnown RBP10.52□□□□□ -0.73
COMMD4-203ENST00000480484 MXRA8Q9BRK3 442 aa10.52□□□□□ -0.73
COMMD4-203ENST00000480484 AASDHPPTQ9NRN7 309 aa10.52□□□□□ -0.73
COMMD4-203ENST00000480484 CCDC195A0A1B0GUA6 201 aa10.52□□□□□ -0.73
COMMD4-203ENST00000480484 SPECC1L-ADORA2AF8WAN1 911 aa10.52□□□□□ -0.73
COMMD4-203ENST00000480484 SGK1O00141 431 aa10.52□□□□□ -0.73
COMMD4-203ENST00000480484 WNT10BO00744 389 aa10.52□□□□□ -0.73
COMMD4-203ENST00000480484 PENKP01210 267 aaPredicted RBP10.52□□□□□ -0.73
COMMD4-203ENST00000480484 EIF2AK2P19525 551 aaKnown RBP10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms