RNA–Protein interactions for RNA: ENST00000480222.1

SIK3-209, Transcript of SIK family kinase 3, humanhuman

TSL 3

Gene SIK3, Length 665 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-209ENST00000480222 TIFAQ96CG3 184 aa13.16□□□□□ -0.3
SIK3-209ENST00000480222 MYRFLQ96LU7 910 aa13.16□□□□□ -0.3
SIK3-209ENST00000480222 OSBPL9Q96SU4 736 aa13.16□□□□□ -0.3
SIK3-209ENST00000480222 CARD9Q9H257 536 aa13.16□□□□□ -0.3
SIK3-209ENST00000480222 CLIC5Q9NZA1 410 aa13.16□□□□□ -0.3
SIK3-209ENST00000480222 UXTQ9UBK9 157 aaPredicted RBP13.16□□□□□ -0.3
SIK3-209ENST00000480222 DPP7Q9UHL4 492 aa13.16□□□□□ -0.3
SIK3-209ENST00000480222 ASB3Q9Y575 518 aa13.16□□□□□ -0.3
SIK3-209ENST00000480222 MTCL1Q9Y4B5 1905 aaKnown RBP13.15□□□□□ -0.3
SIK3-209ENST00000480222 NCK2O43639 380 aa13.15□□□□□ -0.3
SIK3-209ENST00000480222 SOAT2O75908 522 aa13.15□□□□□ -0.3
SIK3-209ENST00000480222 URI1O94763 535 aaPredicted RBP13.15□□□□□ -0.3
SIK3-209ENST00000480222 C8AP07357 584 aa13.15□□□□□ -0.3
SIK3-209ENST00000480222 KRT7P08729 469 aa13.15□□□□□ -0.3
SIK3-209ENST00000480222 HOXA9P31269 272 aa13.15□□□□□ -0.3
SIK3-209ENST00000480222 SULT1E1P49888 294 aa13.15□□□□□ -0.3
SIK3-209ENST00000480222 CLCN4P51793 760 aa13.15□□□□□ -0.3
SIK3-209ENST00000480222 EPHB3P54753 998 aa13.15□□□□□ -0.3
SIK3-209ENST00000480222 USP46P62068 366 aa13.15□□□□□ -0.3
SIK3-209ENST00000480222 SLC25A11Q02978 314 aaKnown RBP13.15□□□□□ -0.3
SIK3-209ENST00000480222 CLUL1Q15846 466 aa13.15□□□□□ -0.3
SIK3-209ENST00000480222 CCDC14Q49A88 953 aa13.15□□□□□ -0.3
SIK3-209ENST00000480222 DCAF6Q58WW2 860 aa13.15□□□□□ -0.3
SIK3-209ENST00000480222 BSPRYQ5W0U4 402 aa13.15□□□□□ -0.3
SIK3-209ENST00000480222 BTBD8Q5XKL5 378 aa13.15□□□□□ -0.3
SIK3-209ENST00000480222 BNIPLQ7Z465 357 aa13.15□□□□□ -0.3
SIK3-209ENST00000480222 KREMEN2Q8NCW0 462 aa13.15□□□□□ -0.3
SIK3-209ENST00000480222 SLC7A14Q8TBB6 771 aa13.15□□□□□ -0.3
SIK3-209ENST00000480222 FAM172AQ8WUF8 416 aa13.15□□□□□ -0.3
SIK3-209ENST00000480222 CENPIQ92674 756 aaPredicted RBP13.15□□□□□ -0.3
SIK3-209ENST00000480222 PSMG2Q969U7 264 aa13.15□□□□□ -0.3
SIK3-209ENST00000480222 PGAP3Q96FM1 320 aaPredicted RBP13.15□□□□□ -0.3
SIK3-209ENST00000480222 PBKQ96KB5 322 aa13.15□□□□□ -0.3
SIK3-209ENST00000480222 CFAP57Q96MR6 1250 aa13.15□□□□□ -0.3
SIK3-209ENST00000480222 CDK5RAP1Q96SZ6 601 aaKnown RBP13.15□□□□□ -0.3
SIK3-209ENST00000480222 TBCBQ99426 244 aa13.15□□□□□ -0.3
SIK3-209ENST00000480222 NPY6RQ99463 290 aa13.15□□□□□ -0.3
SIK3-209ENST00000480222 SMOC2Q9H3U7 446 aa13.15□□□□□ -0.3
SIK3-209ENST00000480222 PLEKHA4Q9H4M7 779 aa13.15□□□□□ -0.3
SIK3-209ENST00000480222 TLR8Q9NR97 1041 aaKnown RBP13.15□□□□□ -0.3
SIK3-209ENST00000480222 OLA1Q9NTK5 396 aaKnown RBP13.15□□□□□ -0.3
SIK3-209ENST00000480222 PACSIN2Q9UNF0 486 aaPredicted RBP13.15□□□□□ -0.3
SIK3-209ENST00000480222 USTQ9Y2C2 406 aa13.15□□□□□ -0.3
SIK3-209ENST00000480222 PCDHA3Q9Y5H8 950 aa13.15□□□□□ -0.3
SIK3-209ENST00000480222 MRFAP1Q9Y605 127 aa13.15□□□□□ -0.3
SIK3-209ENST00000480222 DDX3YO15523 660 aaKnown RBP13.14□□□□□ -0.31
SIK3-209ENST00000480222 LRG1P02750 347 aa13.14□□□□□ -0.31
SIK3-209ENST00000480222 FYNP06241 537 aa13.14□□□□□ -0.31
SIK3-209ENST00000480222 POU2F2P09086 479 aa13.14□□□□□ -0.31
SIK3-209ENST00000480222 NCAM1P13591 858 aa13.14□□□□□ -0.31
SIK3-209ENST00000480222 RDXP35241 583 aaKnown RBP13.14□□□□□ -0.31
SIK3-209ENST00000480222 IRS1P35568 1242 aa13.14□□□□□ -0.31
SIK3-209ENST00000480222 PPP3CCP48454 512 aa13.14□□□□□ -0.31
SIK3-209ENST00000480222 RWDD2BP57060 319 aa13.14□□□□□ -0.31
SIK3-209ENST00000480222 TWF1Q12792 350 aa13.14□□□□□ -0.31
SIK3-209ENST00000480222 TAF12Q16514 161 aa13.14□□□□□ -0.31
SIK3-209ENST00000480222 PTPROQ16827 1216 aa13.14□□□□□ -0.31
SIK3-209ENST00000480222 WHAMMP3Q1A5X7 153 aa13.14□□□□□ -0.31
SIK3-209ENST00000480222 CC2D1AQ6P1N0 951 aaPredicted RBP13.14□□□□□ -0.31
SIK3-209ENST00000480222 MSANTD2Q6P1R3 559 aa13.14□□□□□ -0.31
SIK3-209ENST00000480222 HFE2Q6ZVN8 426 aa13.14□□□□□ -0.31
SIK3-209ENST00000480222 TADA2BQ86TJ2 420 aa13.14□□□□□ -0.31
SIK3-209ENST00000480222 KATNAL2Q8IYT4 538 aa13.14□□□□□ -0.31
SIK3-209ENST00000480222 ELMOD1Q8N336 334 aa13.14□□□□□ -0.31
SIK3-209ENST00000480222 ARNTL2Q8WYA1 636 aa13.14□□□□□ -0.31
SIK3-209ENST00000480222 NDRG1Q92597 394 aaKnown RBP13.14□□□□□ -0.31
SIK3-209ENST00000480222 PPP2R3CQ969Q6 453 aa13.14□□□□□ -0.31
SIK3-209ENST00000480222 L2HGDHQ9H9P8 463 aa13.14□□□□□ -0.31
SIK3-209ENST00000480222 DDX56Q9NY93 547 aaKnown RBP13.14□□□□□ -0.31
SIK3-209ENST00000480222 GMIPQ9P107 970 aa13.14□□□□□ -0.31
SIK3-209ENST00000480222 RNF14Q9UBS8 474 aa13.14□□□□□ -0.31
SIK3-209ENST00000480222 CDC23Q9UJX2 597 aa13.14□□□□□ -0.31
SIK3-209ENST00000480222 TMEM265A0A087WTH1 108 aa13.13□□□□□ -0.31
SIK3-209ENST00000480222 A0A1W2PQH9 124 aa13.13□□□□□ -0.31
SIK3-209ENST00000480222 DLL1O00548 723 aa13.13□□□□□ -0.31
SIK3-209ENST00000480222 KCNK3O14649 394 aa13.13□□□□□ -0.31
SIK3-209ENST00000480222 MDM4O15151 490 aa13.13□□□□□ -0.31
SIK3-209ENST00000480222 PRPSAP2O60256 369 aa13.13□□□□□ -0.31
SIK3-209ENST00000480222 CLASP2O75122 1294 aaKnown RBP13.13□□□□□ -0.31
SIK3-209ENST00000480222 ENDOD1O94919 500 aa13.13□□□□□ -0.31
SIK3-209ENST00000480222 F9P00740 461 aa13.13□□□□□ -0.31
SIK3-209ENST00000480222 IGLV3-25P01717 112 aa13.13□□□□□ -0.31
SIK3-209ENST00000480222 ZDHHC11BP0C7U3 371 aa13.13□□□□□ -0.31
SIK3-209ENST00000480222 RALAP11233 206 aa13.13□□□□□ -0.31
SIK3-209ENST00000480222 HMGA1P17096 107 aaKnown RBP13.13□□□□□ -0.31
SIK3-209ENST00000480222 MIPP30301 263 aa13.13□□□□□ -0.31
SIK3-209ENST00000480222 SSR1P43307 286 aaKnown RBP13.13□□□□□ -0.31
SIK3-209ENST00000480222 PEX5P50542 639 aa13.13□□□□□ -0.31
SIK3-209ENST00000480222 TUBP50607 506 aa13.13□□□□□ -0.31
SIK3-209ENST00000480222 DNA2P51530 1060 aa13.13□□□□□ -0.31
SIK3-209ENST00000480222 AIF1P55008 147 aa13.13□□□□□ -0.31
SIK3-209ENST00000480222 HDAC4P56524 1084 aa13.13□□□□□ -0.31
SIK3-209ENST00000480222 TAS2R40P59535 323 aa13.13□□□□□ -0.31
SIK3-209ENST00000480222 ATP11AP98196 1134 aa13.13□□□□□ -0.31
SIK3-209ENST00000480222 CKAP4Q07065 602 aaKnown RBP13.13□□□□□ -0.31
SIK3-209ENST00000480222 TAF10Q12962 218 aa13.13□□□□□ -0.31
SIK3-209ENST00000480222 NNTQ13423 1086 aa13.13□□□□□ -0.31
SIK3-209ENST00000480222 CDO1Q16878 200 aa13.13□□□□□ -0.31
SIK3-209ENST00000480222 C15orf59Q2T9L4 293 aaPredicted RBP13.13□□□□□ -0.31
SIK3-209ENST00000480222 SEL1L2Q5TEA6 688 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms