RNA–Protein interactions for RNA: ENST00000480139.5

LIME1-205, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene LIME1, Length 819 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-205ENST00000480139 CENPCQ03188 943 aa20.69■□□□□ 0.9
LIME1-205ENST00000480139 KLHL30Q0D2K2 578 aa20.69■□□□□ 0.9
LIME1-205ENST00000480139 USP4Q13107 963 aa20.69■□□□□ 0.9
LIME1-205ENST00000480139 TBX2Q13207 712 aaPredicted RBP20.69■□□□□ 0.9
LIME1-205ENST00000480139 CLEC16AQ2KHT3 1053 aa20.69■□□□□ 0.9
LIME1-205ENST00000480139 BSPRYQ5W0U4 402 aa20.69■□□□□ 0.9
LIME1-205ENST00000480139 BTBD8Q5XKL5 378 aa20.69■□□□□ 0.9
LIME1-205ENST00000480139 HGSNATQ68CP4 663 aa20.69■□□□□ 0.9
LIME1-205ENST00000480139 PPP1R2P3Q6NXS1 205 aa20.69■□□□□ 0.9
LIME1-205ENST00000480139 ERICH1Q86X53 443 aa20.69■□□□□ 0.9
LIME1-205ENST00000480139 DDX42Q86XP3 938 aaKnown RBP eCLIP20.69■□□□□ 0.9
LIME1-205ENST00000480139 DRC7Q8IY82 874 aa20.69■□□□□ 0.9
LIME1-205ENST00000480139 UBALD2Q8IYN6 164 aa20.69■□□□□ 0.9
LIME1-205ENST00000480139 OLIG1Q8TAK6 271 aa20.69■□□□□ 0.9
LIME1-205ENST00000480139 CLEC4CQ8WTT0 213 aa20.69■□□□□ 0.9
LIME1-205ENST00000480139 NDRG1Q92597 394 aaKnown RBP20.69■□□□□ 0.9
LIME1-205ENST00000480139 PCDHB18PQ96TA0 734 aa20.69■□□□□ 0.9
LIME1-205ENST00000480139 RPP25Q9BUL9 199 aaKnown RBP20.69■□□□□ 0.9
LIME1-205ENST00000480139 COL25A1Q9BXS0 654 aaPredicted RBP20.69■□□□□ 0.9
LIME1-205ENST00000480139 PLA2G2FQ9BZM2 168 aa20.69■□□□□ 0.9
LIME1-205ENST00000480139 SMG9Q9H0W8 520 aaKnown RBP20.69■□□□□ 0.9
LIME1-205ENST00000480139 SYNCQ9H7C4 482 aa20.69■□□□□ 0.9
LIME1-205ENST00000480139 ASNSD1Q9NWL6 643 aa20.69■□□□□ 0.9
LIME1-205ENST00000480139 DNMT3LQ9UJW3 386 aa20.69■□□□□ 0.9
LIME1-205ENST00000480139 DUSP12Q9UNI6 340 aa20.69■□□□□ 0.9
LIME1-205ENST00000480139 CCL26Q9Y258 94 aa20.69■□□□□ 0.9
LIME1-205ENST00000480139 SERPING1P05155 500 aa20.68■□□□□ 0.9
LIME1-205ENST00000480139 MBL2P11226 248 aaPredicted RBP20.68■□□□□ 0.9
LIME1-205ENST00000480139 MMP8P22894 467 aa20.68■□□□□ 0.9
LIME1-205ENST00000480139 SCNN1AP37088 669 aa20.68■□□□□ 0.9
LIME1-205ENST00000480139 ZNF77Q15935 545 aa20.68■□□□□ 0.9
LIME1-205ENST00000480139 TOGARAM2Q6ZUX3 1019 aa20.68■□□□□ 0.9
LIME1-205ENST00000480139 BPIFB1Q8TDL5 484 aa20.68■□□□□ 0.9
LIME1-205ENST00000480139 C18orf8Q96DM3 657 aa20.68■□□□□ 0.9
LIME1-205ENST00000480139 ZFRQ96KR1 1074 aaKnown RBP20.68■□□□□ 0.9
LIME1-205ENST00000480139 NACA2Q9H009 215 aa20.68■□□□□ 0.9
LIME1-205ENST00000480139 TJP2Q9UDY2 1190 aa20.68■□□□□ 0.9
LIME1-205ENST00000480139 MUTYHQ9UIF7 546 aa20.68■□□□□ 0.9
LIME1-205ENST00000480139 CPQQ9Y646 472 aa20.68■□□□□ 0.9
LIME1-205ENST00000480139 MFAP3LO75121 409 aa20.67■□□□□ 0.9
LIME1-205ENST00000480139 SRFP11831 508 aa20.67■□□□□ 0.9
LIME1-205ENST00000480139 TNFAIP3P21580 790 aa20.67■□□□□ 0.9
LIME1-205ENST00000480139 NSFP46459 744 aaKnown RBP20.67■□□□□ 0.9
LIME1-205ENST00000480139 EFHC1Q5JVL4 640 aa20.67■□□□□ 0.9
LIME1-205ENST00000480139 C10orf120Q5SQS8 335 aa20.67■□□□□ 0.9
LIME1-205ENST00000480139 MSANTD2Q6P1R3 559 aa20.67■□□□□ 0.9
LIME1-205ENST00000480139 OLFML1Q6UWY5 402 aa20.67■□□□□ 0.9
LIME1-205ENST00000480139 HFE2Q6ZVN8 426 aa20.67■□□□□ 0.9
LIME1-205ENST00000480139 FAM183BPQ6ZVS7 135 aa20.67■□□□□ 0.9
LIME1-205ENST00000480139 SLC26A9Q7LBE3 791 aa20.67■□□□□ 0.9
LIME1-205ENST00000480139 ZNF571Q7Z3V5 609 aaPredicted RBP20.67■□□□□ 0.9
LIME1-205ENST00000480139 TMC6Q7Z403 805 aa20.67■□□□□ 0.9
LIME1-205ENST00000480139 PHF13Q86YI8 300 aaPredicted RBP20.67■□□□□ 0.9
LIME1-205ENST00000480139 CNGA4Q8IV77 575 aa20.67■□□□□ 0.9
LIME1-205ENST00000480139 ST13P5Q8NFI4 369 aaPredicted RBP20.67■□□□□ 0.9
LIME1-205ENST00000480139 OR8K1Q8NGG5 319 aa20.67■□□□□ 0.9
LIME1-205ENST00000480139 SH3RF2Q8TEC5 729 aa20.67■□□□□ 0.9
LIME1-205ENST00000480139 CPA5Q8WXQ8 436 aa20.67■□□□□ 0.9
LIME1-205ENST00000480139 LRRC3BQ96PB8 259 aa20.67■□□□□ 0.9
LIME1-205ENST00000480139 TRMT61BQ9BVS5 477 aaKnown RBP20.67■□□□□ 0.9
LIME1-205ENST00000480139 SLC2A4RGQ9NR83 387 aa20.67■□□□□ 0.9
LIME1-205ENST00000480139 A0A0C4DFX4 3053 aa20.67■□□□□ 0.9
LIME1-205ENST00000480139 LEFTY2O00292 366 aa20.66■□□□□ 0.9
LIME1-205ENST00000480139 TBX18O95935 607 aa20.66■□□□□ 0.9
LIME1-205ENST00000480139 GSCP56915 257 aaPredicted RBP20.66■□□□□ 0.9
LIME1-205ENST00000480139 YWHAZP63104 245 aaKnown RBP20.66■□□□□ 0.9
LIME1-205ENST00000480139 ZXDBP98169 803 aa20.66■□□□□ 0.9
LIME1-205ENST00000480139 SLC6A3Q01959 620 aa20.66■□□□□ 0.9
LIME1-205ENST00000480139 ARHGAP29Q52LW3 1261 aa20.66■□□□□ 0.9
LIME1-205ENST00000480139 RSRC2Q7L4I2 434 aaKnown RBP20.66■□□□□ 0.9
LIME1-205ENST00000480139 RNF139Q8WU17 664 aa20.66■□□□□ 0.9
LIME1-205ENST00000480139 KLF16Q9BXK1 252 aaPredicted RBP20.66■□□□□ 0.9
LIME1-205ENST00000480139 POPDC2Q9HBU9 364 aa20.66■□□□□ 0.9
LIME1-205ENST00000480139 TRPV5Q9NQA5 729 aa20.66■□□□□ 0.9
LIME1-205ENST00000480139 ABHD10Q9NUJ1 306 aa20.66■□□□□ 0.9
LIME1-205ENST00000480139 SEPT11Q9NVA2 429 aaKnown RBP20.66■□□□□ 0.9
LIME1-205ENST00000480139 THG1LQ9NWX6 298 aaKnown RBP20.66■□□□□ 0.9
LIME1-205ENST00000480139 STRIP2Q9ULQ0 834 aa20.66■□□□□ 0.9
LIME1-205ENST00000480139 COL4A2P08572 1712 aa20.66■□□□□ 0.9
LIME1-205ENST00000480139 TNFRSF10AO00220 468 aa20.65■□□□□ 0.9
LIME1-205ENST00000480139 CHADO15335 359 aa20.65■□□□□ 0.9
LIME1-205ENST00000480139 DCXO43602 365 aa20.65■□□□□ 0.9
LIME1-205ENST00000480139 HSF2BPO75031 334 aa20.65■□□□□ 0.9
LIME1-205ENST00000480139 FYNP06241 537 aa20.65■□□□□ 0.9
LIME1-205ENST00000480139 GZMAP12544 262 aa20.65■□□□□ 0.9
LIME1-205ENST00000480139 SKILP12757 684 aa20.65■□□□□ 0.9
LIME1-205ENST00000480139 ALADP13716 330 aa20.65■□□□□ 0.9
LIME1-205ENST00000480139 GOLGA8FQ08AF8 430 aa20.65■□□□□ 0.9
LIME1-205ENST00000480139 GOLGA8DPQ0D2H9 430 aa20.65■□□□□ 0.9
LIME1-205ENST00000480139 MTF1Q14872 753 aa20.65■□□□□ 0.9
LIME1-205ENST00000480139 TDRD12Q587J7 1177 aaKnown RBP20.65■□□□□ 0.9
LIME1-205ENST00000480139 OR6B2Q6IFH4 312 aa20.65■□□□□ 0.9
LIME1-205ENST00000480139 XYLT1Q86Y38 959 aa20.65■□□□□ 0.9
LIME1-205ENST00000480139 YAF2Q8IY57 180 aa20.65■□□□□ 0.9
LIME1-205ENST00000480139 SLC30A5Q8TAD4 765 aa20.65■□□□□ 0.9
LIME1-205ENST00000480139 RIN3Q8TB24 985 aa20.65■□□□□ 0.9
LIME1-205ENST00000480139 EDEM1Q92611 657 aa20.65■□□□□ 0.9
LIME1-205ENST00000480139 DNASE1L2Q92874 299 aa20.65■□□□□ 0.9
LIME1-205ENST00000480139 FAM149B1Q96BN6 582 aa20.65■□□□□ 0.9
LIME1-205ENST00000480139 PIWIL1Q96J94 861 aaKnown RBP20.65■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms