RNA–Protein interactions for RNA: ENST00000479988.1

CPS1-207, Transcript of carbamoyl-phosphate synthase 1, humanhuman

TSL 1 (best)

Gene CPS1, Length 4,811 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1-207ENST00000479988 DDX47Q9H0S4 455 aaKnown RBP6.2□□□□□ -1.42
CPS1-207ENST00000479988 IRF2BPLQ9H1B7 796 aa6.2□□□□□ -1.42
CPS1-207ENST00000479988 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP6.2□□□□□ -1.42
CPS1-207ENST00000479988 FLRT1Q9NZU1 646 aa6.2□□□□□ -1.42
CPS1-207ENST00000479988 MARCH2Q9P0N8 246 aa6.2□□□□□ -1.42
CPS1-207ENST00000479988 KIAA1522Q9P206 1035 aaPredicted RBP6.2□□□□□ -1.42
CPS1-207ENST00000479988 PCSK1NQ9UHG2 260 aa6.2□□□□□ -1.42
CPS1-207ENST00000479988 IP6K2Q9UHH9 426 aa6.2□□□□□ -1.42
CPS1-207ENST00000479988 DNMT3LQ9UJW3 386 aa6.2□□□□□ -1.42
CPS1-207ENST00000479988 TTC7AQ9ULT0 858 aaPredicted RBP6.2□□□□□ -1.42
CPS1-207ENST00000479988 ADAMTS5Q9UNA0 930 aa6.2□□□□□ -1.42
CPS1-207ENST00000479988 ZNF510Q9Y2H8 683 aa6.2□□□□□ -1.42
CPS1-207ENST00000479988 H3BQ06 376 aaPredicted RBP6.19□□□□□ -1.42
CPS1-207ENST00000479988 S100BP04271 92 aaPredicted RBP6.19□□□□□ -1.42
CPS1-207ENST00000479988 PTPN1P18031 435 aaKnown RBP6.19□□□□□ -1.42
CPS1-207ENST00000479988 EDNRBP24530 442 aa6.19□□□□□ -1.42
CPS1-207ENST00000479988 FNTAP49354 379 aa6.19□□□□□ -1.42
CPS1-207ENST00000479988 CCDC62Q6P9F0 684 aa6.19□□□□□ -1.42
CPS1-207ENST00000479988 MREGQ8N565 214 aa6.19□□□□□ -1.42
CPS1-207ENST00000479988 AENQ8WTP8 325 aaKnown RBP6.19□□□□□ -1.42
CPS1-207ENST00000479988 GDPD5Q8WTR4 605 aa6.19□□□□□ -1.42
CPS1-207ENST00000479988 C2orf15Q8WU43 125 aaKnown RBP6.19□□□□□ -1.42
CPS1-207ENST00000479988 MS4A14Q96JA4 679 aa6.19□□□□□ -1.42
CPS1-207ENST00000479988 ATP6V1G3Q96LB4 118 aa6.19□□□□□ -1.42
CPS1-207ENST00000479988 FBXL18Q96ME1 805 aa6.19□□□□□ -1.42
CPS1-207ENST00000479988 BBS2Q9BXC9 721 aa6.19□□□□□ -1.42
CPS1-207ENST00000479988 AVENQ9NQS1 362 aaPredicted RBP6.19□□□□□ -1.42
CPS1-207ENST00000479988 MAN1C1Q9NR34 630 aa6.19□□□□□ -1.42
CPS1-207ENST00000479988 CFAP99D6REC4 459 aa6.19□□□□□ -1.42
CPS1-207ENST00000479988 C1QTNF3-AMACRE9PGA6 284 aa6.19□□□□□ -1.42
CPS1-207ENST00000479988 ZBTB39O15060 712 aa6.19□□□□□ -1.42
CPS1-207ENST00000479988 INPPL1O15357 1258 aa6.19□□□□□ -1.42
CPS1-207ENST00000479988 HPDP32754 393 aaPredicted RBP6.19□□□□□ -1.42
CPS1-207ENST00000479988 THOP1P52888 689 aa6.19□□□□□ -1.42
CPS1-207ENST00000479988 PLTPP55058 493 aa6.19□□□□□ -1.42
CPS1-207ENST00000479988 PSMD6Q15008 389 aa6.19□□□□□ -1.42
CPS1-207ENST00000479988 SHHQ15465 462 aa6.19□□□□□ -1.42
CPS1-207ENST00000479988 TARBP2Q15633 366 aaKnown RBP6.19□□□□□ -1.42
CPS1-207ENST00000479988 VARS2Q5ST30 1063 aaKnown RBP6.19□□□□□ -1.42
CPS1-207ENST00000479988 RNF187Q5TA31 235 aaPredicted RBP6.19□□□□□ -1.42
CPS1-207ENST00000479988 AGBL2Q5U5Z8 902 aa6.19□□□□□ -1.42
CPS1-207ENST00000479988 NUP93Q8N1F7 819 aa6.19□□□□□ -1.42
CPS1-207ENST00000479988 ATPAF2Q8N5M1 289 aa6.19□□□□□ -1.42
CPS1-207ENST00000479988 TOP6BLQ8N6T0 577 aa6.19□□□□□ -1.42
CPS1-207ENST00000479988 MAB21L3Q8N8X9 362 aa6.19□□□□□ -1.42
CPS1-207ENST00000479988 SCG3Q8WXD2 468 aaKnown RBP6.19□□□□□ -1.42
CPS1-207ENST00000479988 PPP1R16AQ96I34 528 aa6.19□□□□□ -1.42
CPS1-207ENST00000479988 ERP44Q9BS26 406 aa6.19□□□□□ -1.42
CPS1-207ENST00000479988 RASSF4Q9H2L5 321 aa6.19□□□□□ -1.42
CPS1-207ENST00000479988 AASDHPPTQ9NRN7 309 aa6.19□□□□□ -1.42
CPS1-207ENST00000479988 AFF4Q9UHB7 1163 aaKnown RBP6.19□□□□□ -1.42
CPS1-207ENST00000479988 FBXO10Q9UK96 956 aa6.19□□□□□ -1.42
CPS1-207ENST00000479988 PACSIN2Q9UNF0 486 aaPredicted RBP6.19□□□□□ -1.42
CPS1-207ENST00000479988 TRIOBPQ9H2D6 2365 aa6.19□□□□□ -1.42
CPS1-207ENST00000479988 A0A0U1RQJ8 604 aa6.19□□□□□ -1.42
CPS1-207ENST00000479988 ARHGAP42A6NI28 874 aa6.19□□□□□ -1.42
CPS1-207ENST00000479988 M0QYT0 321 aa6.19□□□□□ -1.42
CPS1-207ENST00000479988 PPP1R12AO14974 1030 aaPredicted RBP6.19□□□□□ -1.42
CPS1-207ENST00000479988 RAD51CO43502 376 aa6.19□□□□□ -1.42
CPS1-207ENST00000479988 GNSP15586 552 aa6.19□□□□□ -1.42
CPS1-207ENST00000479988 CCR1P32246 355 aa6.19□□□□□ -1.42
CPS1-207ENST00000479988 ADCY8P40145 1251 aa6.19□□□□□ -1.42
CPS1-207ENST00000479988 NDST1P52848 882 aa6.19□□□□□ -1.42
CPS1-207ENST00000479988 HADHBP55084 474 aaKnown RBP6.19□□□□□ -1.42
CPS1-207ENST00000479988 WDR5P61964 334 aaKnown RBP6.19□□□□□ -1.42
CPS1-207ENST00000479988 NT5DC3Q86UY8 548 aa6.19□□□□□ -1.42
CPS1-207ENST00000479988 TMEM161BQ8NDZ6 487 aa6.19□□□□□ -1.42
CPS1-207ENST00000479988 PMM1Q92871 262 aa6.19□□□□□ -1.42
CPS1-207ENST00000479988 SELENOSQ9BQE4 189 aa6.19□□□□□ -1.42
CPS1-207ENST00000479988 ZNF518BQ9C0D4 1074 aa6.19□□□□□ -1.42
CPS1-207ENST00000479988 GDF3Q9NR23 364 aa6.19□□□□□ -1.42
CPS1-207ENST00000479988 FAM53CQ9NYF3 392 aa6.19□□□□□ -1.42
CPS1-207ENST00000479988 PLAAQ9Y263 795 aa6.19□□□□□ -1.42
CPS1-207ENST00000479988 USP20Q9Y2K6 914 aa6.19□□□□□ -1.42
CPS1-207ENST00000479988 MYH8P13535 1937 aa6.19□□□□□ -1.42
CPS1-207ENST00000479988 KIAA0355O15063 1070 aa6.19□□□□□ -1.42
CPS1-207ENST00000479988 TJP3O95049 919 aa6.19□□□□□ -1.42
CPS1-207ENST00000479988 RALBP11234 206 aa6.19□□□□□ -1.42
CPS1-207ENST00000479988 CYP3A5P20815 502 aa6.19□□□□□ -1.42
CPS1-207ENST00000479988 C21orf59P57076 290 aa6.19□□□□□ -1.42
CPS1-207ENST00000479988 JAM2P57087 298 aa6.19□□□□□ -1.42
CPS1-207ENST00000479988 MRPS5P82675 430 aaKnown RBP6.19□□□□□ -1.42
CPS1-207ENST00000479988 THOC5Q13769 683 aaKnown RBP6.19□□□□□ -1.42
CPS1-207ENST00000479988 UAP1Q16222 522 aaPredicted RBP6.19□□□□□ -1.42
CPS1-207ENST00000479988 INAVAQ3KP66 663 aa6.19□□□□□ -1.42
CPS1-207ENST00000479988 SYCP2LQ5T4T6 812 aa6.19□□□□□ -1.42
CPS1-207ENST00000479988 FAM46CQ5VWP2 391 aa6.19□□□□□ -1.42
CPS1-207ENST00000479988 GRAMD4Q6IC98 578 aa6.19□□□□□ -1.42
CPS1-207ENST00000479988 GJB7Q6PEY0 223 aa6.19□□□□□ -1.42
CPS1-207ENST00000479988 TPGS1Q6ZTW0 290 aa6.19□□□□□ -1.42
CPS1-207ENST00000479988 SV2AQ7L0J3 742 aa6.19□□□□□ -1.42
CPS1-207ENST00000479988 MFN1Q8IWA4 741 aa6.19□□□□□ -1.42
CPS1-207ENST00000479988 FAM126BQ8IXS8 530 aa6.19□□□□□ -1.42
CPS1-207ENST00000479988 SPDYE1Q8NFV5 336 aaPredicted RBP6.19□□□□□ -1.42
CPS1-207ENST00000479988 RAB3IL1Q8TBN0 382 aa6.19□□□□□ -1.42
CPS1-207ENST00000479988 SLC2A14Q8TDB8 520 aa6.19□□□□□ -1.42
CPS1-207ENST00000479988 ZSWIM1Q9BR11 485 aa6.19□□□□□ -1.42
CPS1-207ENST00000479988 PACSIN1Q9BY11 444 aa6.19□□□□□ -1.42
CPS1-207ENST00000479988 CISHQ9NSE2 258 aa6.19□□□□□ -1.42
CPS1-207ENST00000479988 DDX56Q9NY93 547 aaKnown RBP6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms