RNA–Protein interactions for RNA: ENST00000479542.1

ABCF1-206, Transcript of ATP binding cassette subfamily F member 1, humanhuman

TSL 2

Gene ABCF1, Length 893 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-206ENST00000479542 GABRG2P18507 467 aa14.07□□□□□ -0.16
ABCF1-206ENST00000479542 CYP2J2P51589 502 aa14.07□□□□□ -0.16
ABCF1-206ENST00000479542 ENPEPQ07075 957 aa14.07□□□□□ -0.16
ABCF1-206ENST00000479542 FOXC1Q12948 553 aa14.07□□□□□ -0.16
ABCF1-206ENST00000479542 NCOA4Q13772 614 aa14.07□□□□□ -0.16
ABCF1-206ENST00000479542 E2F5Q15329 346 aa14.07□□□□□ -0.16
ABCF1-206ENST00000479542 ZNF699Q32M78 642 aa14.07□□□□□ -0.16
ABCF1-206ENST00000479542 SDE2Q6IQ49 451 aa14.07□□□□□ -0.16
ABCF1-206ENST00000479542 SHC4Q6S5L8 630 aa14.07□□□□□ -0.16
ABCF1-206ENST00000479542 TMEM25Q86YD3 366 aa14.07□□□□□ -0.16
ABCF1-206ENST00000479542 BBS7Q8IWZ6 715 aa14.07□□□□□ -0.16
ABCF1-206ENST00000479542 ZMIZ2Q8NF64 920 aa14.07□□□□□ -0.16
ABCF1-206ENST00000479542 TMC2Q8TDI7 906 aa14.07□□□□□ -0.16
ABCF1-206ENST00000479542 DHX58Q96C10 678 aa14.07□□□□□ -0.16
ABCF1-206ENST00000479542 KLF16Q9BXK1 252 aaPredicted RBP14.07□□□□□ -0.16
ABCF1-206ENST00000479542 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.07□□□□□ -0.162e-18■■■■■ 86.9
ABCF1-206ENST00000479542 HCN2Q9UL51 889 aa14.07□□□□□ -0.16
ABCF1-206ENST00000479542 SCML2Q9UQR0 700 aa14.07□□□□□ -0.16
ABCF1-206ENST00000479542 SYPP08247 313 aa14.06□□□□□ -0.16
ABCF1-206ENST00000479542 HOXB2P14652 356 aa14.06□□□□□ -0.16
ABCF1-206ENST00000479542 TRIM21P19474 475 aaKnown RBP14.06□□□□□ -0.16
ABCF1-206ENST00000479542 ITPKAP23677 461 aa14.06□□□□□ -0.16
ABCF1-206ENST00000479542 ATP5C1P36542 298 aaKnown RBP14.06□□□□□ -0.16
ABCF1-206ENST00000479542 PSEN1P49768 467 aa14.06□□□□□ -0.16
ABCF1-206ENST00000479542 CDH8P55286 799 aa14.06□□□□□ -0.16
ABCF1-206ENST00000479542 MCCD1P59942 119 aaPredicted RBP14.06□□□□□ -0.16
ABCF1-206ENST00000479542 GFPT1Q06210 699 aaPredicted RBP14.06□□□□□ -0.16
ABCF1-206ENST00000479542 ZNF33AQ06730 810 aa14.06□□□□□ -0.16
ABCF1-206ENST00000479542 GOLGA8FQ08AF8 430 aa14.06□□□□□ -0.16
ABCF1-206ENST00000479542 GOLGA8DPQ0D2H9 430 aa14.06□□□□□ -0.16
ABCF1-206ENST00000479542 ZACNQ401N2 412 aa14.06□□□□□ -0.16
ABCF1-206ENST00000479542 HDDC3Q8N4P3 179 aa14.06□□□□□ -0.16
ABCF1-206ENST00000479542 DEFB124Q8NES8 71 aa14.06□□□□□ -0.16
ABCF1-206ENST00000479542 PLEKHO2Q8TD55 490 aa14.06□□□□□ -0.16
ABCF1-206ENST00000479542 FAXDC2Q96IV6 333 aa14.06□□□□□ -0.16
ABCF1-206ENST00000479542 SMOQ99835 787 aa14.06□□□□□ -0.16
ABCF1-206ENST00000479542 FAM124BQ9H5Z6 455 aaPredicted RBP14.06□□□□□ -0.16
ABCF1-206ENST00000479542 CCSER2Q9H7U1 834 aa14.06□□□□□ -0.16
ABCF1-206ENST00000479542 PCDHA5Q9Y5H7 936 aa14.06□□□□□ -0.16
ABCF1-206ENST00000479542 IGHV1OR15-9A0A0B4J2B8 117 aa14.05□□□□□ -0.16
ABCF1-206ENST00000479542 LRRIQ3A6PVS8 624 aaPredicted RBP14.05□□□□□ -0.16
ABCF1-206ENST00000479542 ARHGAP33O14559 1287 aa14.05□□□□□ -0.16
ABCF1-206ENST00000479542 MAPK13O15264 365 aa14.05□□□□□ -0.16
ABCF1-206ENST00000479542 OPHN1O60890 802 aa14.05□□□□□ -0.16
ABCF1-206ENST00000479542 AP1G2O75843 785 aa14.05□□□□□ -0.16
ABCF1-206ENST00000479542 VNN1O95497 513 aa14.05□□□□□ -0.16
ABCF1-206ENST00000479542 MYL1P05976 194 aa14.05□□□□□ -0.16
ABCF1-206ENST00000479542 C7P10643 843 aa14.05□□□□□ -0.16
ABCF1-206ENST00000479542 PLA2G4AP47712 749 aa14.05□□□□□ -0.16
ABCF1-206ENST00000479542 ATXN3P54252 364 aaPredicted RBP14.05□□□□□ -0.16
ABCF1-206ENST00000479542 RPL6Q02878 288 aaKnown RBP14.05□□□□□ -0.16
ABCF1-206ENST00000479542 KDSRQ06136 332 aa14.05□□□□□ -0.16
ABCF1-206ENST00000479542 ZNF423Q2M1K9 1284 aa14.05□□□□□ -0.16
ABCF1-206ENST00000479542 UAP1L1Q3KQV9 507 aa14.05□□□□□ -0.16
ABCF1-206ENST00000479542 C10orf76Q5T2E6 689 aa14.05□□□□□ -0.16
ABCF1-206ENST00000479542 GRAMD4Q6IC98 578 aa14.05□□□□□ -0.16
ABCF1-206ENST00000479542 TTC30AQ86WT1 665 aa14.05□□□□□ -0.16
ABCF1-206ENST00000479542 NELFCDQ8IXH7 590 aa14.05□□□□□ -0.16
ABCF1-206ENST00000479542 PGBD3Q8N328 593 aa14.05□□□□□ -0.16
ABCF1-206ENST00000479542 FRMD1Q8N878 549 aa14.05□□□□□ -0.16
ABCF1-206ENST00000479542 IPO4Q8TEX9 1081 aaKnown RBP14.05□□□□□ -0.16
ABCF1-206ENST00000479542 FOXJ1Q92949 421 aa14.05□□□□□ -0.16
ABCF1-206ENST00000479542 HNRNPABQ99729 332 aaKnown RBP14.05□□□□□ -0.16
ABCF1-206ENST00000479542 ZDHHC5Q9C0B5 715 aa14.05□□□□□ -0.16
ABCF1-206ENST00000479542 SMYD3Q9H7B4 428 aa14.05□□□□□ -0.16
ABCF1-206ENST00000479542 GMIPQ9P107 970 aa14.05□□□□□ -0.16
ABCF1-206ENST00000479542 CALCOCO1Q9P1Z2 691 aa14.05□□□□□ -0.16
ABCF1-206ENST00000479542 SUSD2Q9UGT4 822 aa14.05□□□□□ -0.16
ABCF1-206ENST00000479542 LSM7Q9UK45 103 aaKnown RBP14.05□□□□□ -0.16
ABCF1-206ENST00000479542 ZNF510Q9Y2H8 683 aa14.05□□□□□ -0.16
ABCF1-206ENST00000479542 SLC27A6Q9Y2P4 619 aa14.05□□□□□ -0.16
ABCF1-206ENST00000479542 ZZEF1O43149 2961 aa14.04□□□□□ -0.16
ABCF1-206ENST00000479542 CACNA1EQ15878 2313 aa14.04□□□□□ -0.16
ABCF1-206ENST00000479542 PDXKO00764 312 aa14.04□□□□□ -0.16
ABCF1-206ENST00000479542 POLR2DO15514 142 aaKnown RBP14.04□□□□□ -0.16
ABCF1-206ENST00000479542 GJB3O75712 270 aa14.04□□□□□ -0.16
ABCF1-206ENST00000479542 ASS1P00966 412 aaKnown RBP14.04□□□□□ -0.16
ABCF1-206ENST00000479542 CISD3P0C7P0 127 aa14.04□□□□□ -0.16
ABCF1-206ENST00000479542 TYRP14679 529 aa14.04□□□□□ -0.16
ABCF1-206ENST00000479542 INCA1Q0VD86 236 aa14.04□□□□□ -0.16
ABCF1-206ENST00000479542 IFRD2Q12894 506 aaPredicted RBP14.04□□□□□ -0.16
ABCF1-206ENST00000479542 BIRC3Q13489 604 aa14.04□□□□□ -0.16
ABCF1-206ENST00000479542 ENPP2Q13822 863 aa14.04□□□□□ -0.16
ABCF1-206ENST00000479542 ANO4Q32M45 955 aa14.04□□□□□ -0.16
ABCF1-206ENST00000479542 SYCP2LQ5T4T6 812 aa14.04□□□□□ -0.16
ABCF1-206ENST00000479542 Q6ZNB5 142 aa14.04□□□□□ -0.16
ABCF1-206ENST00000479542 TADA2BQ86TJ2 420 aa14.04□□□□□ -0.16
ABCF1-206ENST00000479542 MIB1Q86YT6 1006 aa14.04□□□□□ -0.16
ABCF1-206ENST00000479542 NAT16Q8N8M0 369 aa14.04□□□□□ -0.16
ABCF1-206ENST00000479542 DNASE2BQ8WZ79 361 aa14.04□□□□□ -0.16
ABCF1-206ENST00000479542 CDK5RAP1Q96SZ6 601 aaKnown RBP14.04□□□□□ -0.16
ABCF1-206ENST00000479542 MED10Q9BTT4 135 aa14.04□□□□□ -0.16
ABCF1-206ENST00000479542 NACA2Q9H009 215 aa14.04□□□□□ -0.16
ABCF1-206ENST00000479542 SDCBP2Q9H190 292 aa14.04□□□□□ -0.16
ABCF1-206ENST00000479542 CYP3A43Q9HB55 503 aa14.04□□□□□ -0.16
ABCF1-206ENST00000479542 SLC39A2Q9NP94 309 aa14.04□□□□□ -0.16
ABCF1-206ENST00000479542 KRT82Q9NSB4 513 aa14.04□□□□□ -0.16
ABCF1-206ENST00000479542 DNAJC17Q9NVM6 304 aaKnown RBP14.04□□□□□ -0.16
ABCF1-206ENST00000479542 FAM13BQ9NYF5 915 aa14.04□□□□□ -0.16
ABCF1-206ENST00000479542 CLIC5Q9NZA1 410 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms