RNA–Protein interactions for RNA: ENST00000479525.6

ECHDC1-216, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 1,368 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-216ENST00000479525 PLK2Q9NYY3 685 aa18.34■□□□□ 0.53
ECHDC1-216ENST00000479525 MMP17Q9ULZ9 603 aa18.34■□□□□ 0.53
ECHDC1-216ENST00000479525 PRR5-ARHGAP8B1AHC4 643 aa18.33■□□□□ 0.53
ECHDC1-216ENST00000479525 TULP2O00295 520 aa18.33■□□□□ 0.53
ECHDC1-216ENST00000479525 CETN3O15182 167 aa18.33■□□□□ 0.53
ECHDC1-216ENST00000479525 EPN2O95208 641 aa18.33■□□□□ 0.53
ECHDC1-216ENST00000479525 CALCAP01258 141 aa18.33■□□□□ 0.53
ECHDC1-216ENST00000479525 CHRM1P11229 460 aaPredicted RBP18.33■□□□□ 0.53
ECHDC1-216ENST00000479525 RARGP13631 454 aa18.33■□□□□ 0.53
ECHDC1-216ENST00000479525 ARHGAP8P85298 464 aa18.33■□□□□ 0.53
ECHDC1-216ENST00000479525 FOXK2Q01167 660 aa18.33■□□□□ 0.53
ECHDC1-216ENST00000479525 EDRF1Q3B7T1 1238 aa18.33■□□□□ 0.53
ECHDC1-216ENST00000479525 SCD5Q86SK9 330 aa18.33■□□□□ 0.53
ECHDC1-216ENST00000479525 MIB1Q86YT6 1006 aa18.33■□□□□ 0.53
ECHDC1-216ENST00000479525 PHTF2Q8N3S3 785 aa18.33■□□□□ 0.53
ECHDC1-216ENST00000479525 SLC4A11Q8NBS3 891 aa18.33■□□□□ 0.53
ECHDC1-216ENST00000479525 CCDC150Q8NCX0 1101 aa18.33■□□□□ 0.53
ECHDC1-216ENST00000479525 FBXO44Q9H4M3 255 aa18.33■□□□□ 0.53
ECHDC1-216ENST00000479525 CISHQ9NSE2 258 aa18.33■□□□□ 0.53
ECHDC1-216ENST00000479525 RAB20Q9NX57 234 aa18.33■□□□□ 0.53
ECHDC1-216ENST00000479525 NAGPAQ9UK23 515 aa18.33■□□□□ 0.53
ECHDC1-216ENST00000479525 SCML2Q9UQR0 700 aa18.33■□□□□ 0.53
ECHDC1-216ENST00000479525 NEDD8-MDP1E9PL57 170 aa18.32■□□□□ 0.52
ECHDC1-216ENST00000479525 GREM1O60565 184 aa18.32■□□□□ 0.52
ECHDC1-216ENST00000479525 ADAM23O75077 832 aa18.32■□□□□ 0.52
ECHDC1-216ENST00000479525 TULP3O75386 442 aa18.32■□□□□ 0.52
ECHDC1-216ENST00000479525 CD44P16070 742 aaKnown RBP18.32■□□□□ 0.52
ECHDC1-216ENST00000479525 MPLP40238 635 aa18.32■□□□□ 0.52
ECHDC1-216ENST00000479525 RAD23BP54727 409 aa18.32■□□□□ 0.52
ECHDC1-216ENST00000479525 CREB5Q02930 508 aa18.32■□□□□ 0.52
ECHDC1-216ENST00000479525 GAD2Q05329 585 aa18.32■□□□□ 0.52
ECHDC1-216ENST00000479525 C10orf120Q5SQS8 335 aa18.32■□□□□ 0.52
ECHDC1-216ENST00000479525 ZNF658Q5TYW1 1059 aaPredicted RBP18.32■□□□□ 0.52
ECHDC1-216ENST00000479525 ARMCX6Q7L4S7 300 aa18.32■□□□□ 0.52
ECHDC1-216ENST00000479525 FBXL13Q8NEE6 735 aa18.32■□□□□ 0.52
ECHDC1-216ENST00000479525 SMARCE1Q969G3 411 aa18.32■□□□□ 0.52
ECHDC1-216ENST00000479525 DUSP16Q9BY84 665 aa18.32■□□□□ 0.52
ECHDC1-216ENST00000479525 TBC1D14Q9P2M4 693 aa18.32■□□□□ 0.52
ECHDC1-216ENST00000479525 RASAL2Q9UJF2 1139 aa18.32■□□□□ 0.52
ECHDC1-216ENST00000479525 HCN2Q9UL51 889 aa18.32■□□□□ 0.52
ECHDC1-216ENST00000479525 CCDC163A0A0D9SF12 145 aa18.31■□□□□ 0.52
ECHDC1-216ENST00000479525 TBC1D3BA6NDS4 549 aa18.31■□□□□ 0.52
ECHDC1-216ENST00000479525 ATP5C1P36542 298 aaKnown RBP18.31■□□□□ 0.52
ECHDC1-216ENST00000479525 KIR2DL1P43626 348 aaPredicted RBP18.31■□□□□ 0.52
ECHDC1-216ENST00000479525 TUBP50607 506 aa18.31■□□□□ 0.52
ECHDC1-216ENST00000479525 KIF11P52732 1056 aa18.31■□□□□ 0.52
ECHDC1-216ENST00000479525 CRY1Q16526 586 aa18.31■□□□□ 0.52
ECHDC1-216ENST00000479525 C10orf76Q5T2E6 689 aa18.31■□□□□ 0.52
ECHDC1-216ENST00000479525 KLHL10Q6JEL2 608 aa18.31■□□□□ 0.52
ECHDC1-216ENST00000479525 TOGARAM2Q6ZUX3 1019 aa18.31■□□□□ 0.52
ECHDC1-216ENST00000479525 ETFBKMTQ8IXQ9 262 aa18.31■□□□□ 0.52
ECHDC1-216ENST00000479525 C12orf50Q8NA57 414 aaPredicted RBP18.31■□□□□ 0.52
ECHDC1-216ENST00000479525 NETO1Q8TDF5 533 aa18.31■□□□□ 0.52
ECHDC1-216ENST00000479525 HMGB4Q8WW32 186 aa18.31■□□□□ 0.52
ECHDC1-216ENST00000479525 DNAJC17Q9NVM6 304 aaKnown RBP18.31■□□□□ 0.52
ECHDC1-216ENST00000479525 MTPAPQ9NVV4 582 aaKnown RBP eCLIP18.31■□□□□ 0.52
ECHDC1-216ENST00000479525 COMMD8Q9NX08 183 aa18.31■□□□□ 0.52
ECHDC1-216ENST00000479525 PLXND1Q9Y4D7 1925 aa18.31■□□□□ 0.52
ECHDC1-216ENST00000479525 PATE3B3GLJ2 98 aa18.3■□□□□ 0.52
ECHDC1-216ENST00000479525 LRP3O75074 770 aa18.3■□□□□ 0.52
ECHDC1-216ENST00000479525 GADD45BO75293 160 aaPredicted RBP18.3■□□□□ 0.52
ECHDC1-216ENST00000479525 EFEMP1Q12805 493 aa18.3■□□□□ 0.52
ECHDC1-216ENST00000479525 BECN1Q14457 450 aa18.3■□□□□ 0.52
ECHDC1-216ENST00000479525 BTBD8Q5XKL5 378 aa18.3■□□□□ 0.52
ECHDC1-216ENST00000479525 EGFLAMQ63HQ2 1017 aa18.3■□□□□ 0.52
ECHDC1-216ENST00000479525 PGBD3Q8N328 593 aa18.3■□□□□ 0.52
ECHDC1-216ENST00000479525 DEFB119Q8N690 84 aa18.3■□□□□ 0.52
ECHDC1-216ENST00000479525 TMEM176AQ96HP8 235 aa18.3■□□□□ 0.52
ECHDC1-216ENST00000479525 ACOX2Q99424 681 aa18.3■□□□□ 0.52
ECHDC1-216ENST00000479525 TSG101Q99816 390 aa18.3■□□□□ 0.52
ECHDC1-216ENST00000479525 RTKNQ9BST9 563 aa18.3■□□□□ 0.52
ECHDC1-216ENST00000479525 RMND1Q9NWS8 449 aa18.3■□□□□ 0.52
ECHDC1-216ENST00000479525 BCCIPQ9P287 314 aaKnown RBP eCLIP18.3■□□□□ 0.52
ECHDC1-216ENST00000479525 MAN1B1Q9UKM7 699 aa18.3■□□□□ 0.52
ECHDC1-216ENST00000479525 NCOR2Q9Y618 2525 aa18.3■□□□□ 0.52
ECHDC1-216ENST00000479525 TCRBV21S2A2A0A5A6 115 aa18.3■□□□□ 0.52
ECHDC1-216ENST00000479525 PIK3R2O00459 728 aa18.3■□□□□ 0.52
ECHDC1-216ENST00000479525 BIN1O00499 593 aa18.3■□□□□ 0.52
ECHDC1-216ENST00000479525 SLC30A4O14863 429 aa18.3■□□□□ 0.52
ECHDC1-216ENST00000479525 TYRP14679 529 aa18.3■□□□□ 0.52
ECHDC1-216ENST00000479525 GRIA2P42262 883 aa18.3■□□□□ 0.52
ECHDC1-216ENST00000479525 MRPS21P82921 87 aaKnown RBP18.3■□□□□ 0.52
ECHDC1-216ENST00000479525 GOLGA7BQ2TAP0 167 aa18.3■□□□□ 0.52
ECHDC1-216ENST00000479525 PPM1JQ5JR12 505 aa18.3■□□□□ 0.52
ECHDC1-216ENST00000479525 PIGZQ86VD9 579 aa18.3■□□□□ 0.52
ECHDC1-216ENST00000479525 ZNF513Q8N8E2 541 aaPredicted RBP18.3■□□□□ 0.52
ECHDC1-216ENST00000479525 TERB1Q8NA31 727 aa18.3■□□□□ 0.52
ECHDC1-216ENST00000479525 BBS2Q9BXC9 721 aa18.3■□□□□ 0.52
ECHDC1-216ENST00000479525 CYLDQ9NQC7 956 aa18.3■□□□□ 0.52
ECHDC1-216ENST00000479525 DEC1Q9P2X7 70 aa18.3■□□□□ 0.52
ECHDC1-216ENST00000479525 EBF1Q9UH73 591 aa18.3■□□□□ 0.52
ECHDC1-216ENST00000479525 ATXN2Q99700 1313 aaKnown RBP18.29■□□□□ 0.52
ECHDC1-216ENST00000479525 HOXC11O43248 304 aaPredicted RBP18.29■□□□□ 0.52
ECHDC1-216ENST00000479525 STC2O76061 302 aa18.29■□□□□ 0.52
ECHDC1-216ENST00000479525 ZNF806P0C7X5 589 aa18.29■□□□□ 0.52
ECHDC1-216ENST00000479525 TRIM21P19474 475 aaKnown RBP18.29■□□□□ 0.52
ECHDC1-216ENST00000479525 GTF2H1P32780 548 aa18.29■□□□□ 0.52
ECHDC1-216ENST00000479525 DHPSP49366 369 aaPredicted RBP18.29■□□□□ 0.52
ECHDC1-216ENST00000479525 STX17P56962 302 aa18.29■□□□□ 0.52
ECHDC1-216ENST00000479525 ELF2Q15723 593 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms