RNA–Protein interactions for RNA: ENST00000479414.1

CCDC58-204, Transcript of coiled-coil domain containing 58, humanhuman

TSL 3

Gene CCDC58, Length 431 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-204ENST00000479414 ZMYND8Q9ULU4 1186 aaPredicted RBP6.38□□□□□ -1.39
CCDC58-204ENST00000479414 OR2W5A6NFC9 320 aa6.37□□□□□ -1.39
CCDC58-204ENST00000479414 AQP12BA6NM10 295 aa6.37□□□□□ -1.39
CCDC58-204ENST00000479414 A8MVJ9 347 aa6.37□□□□□ -1.39
CCDC58-204ENST00000479414 AP4M1O00189 453 aa6.37□□□□□ -1.39
CCDC58-204ENST00000479414 PODXLO00592 558 aa6.37□□□□□ -1.39
CCDC58-204ENST00000479414 SPRY2O43597 315 aa6.37□□□□□ -1.39
CCDC58-204ENST00000479414 IGLV2-14P01704 120 aa6.37□□□□□ -1.39
CCDC58-204ENST00000479414 HNRNPCP07910 306 aaKnown RBP eCLIP6.37□□□□□ -1.39
CCDC58-204ENST00000479414 GALNT1Q10472 559 aaPredicted RBP6.37□□□□□ -1.39
CCDC58-204ENST00000479414 TRIM14Q14142 442 aa6.37□□□□□ -1.39
CCDC58-204ENST00000479414 SMN1Q16637 294 aaKnown RBP6.37□□□□□ -1.39
CCDC58-204ENST00000479414 MAPKAPK3Q16644 382 aa6.37□□□□□ -1.39
CCDC58-204ENST00000479414 ARHGAP15Q53QZ3 475 aa6.37□□□□□ -1.39
CCDC58-204ENST00000479414 CEP85Q6P2H3 762 aa6.37□□□□□ -1.39
CCDC58-204ENST00000479414 FBXO42Q6P3S6 717 aa6.37□□□□□ -1.39
CCDC58-204ENST00000479414 CLEC9AQ6UXN8 241 aa6.37□□□□□ -1.39
CCDC58-204ENST00000479414 PTCHD4Q6ZW05 846 aa6.37□□□□□ -1.39
CCDC58-204ENST00000479414 ARHGEF25Q86VW2 580 aa6.37□□□□□ -1.39
CCDC58-204ENST00000479414 ADGRG3Q86Y34 549 aa6.37□□□□□ -1.39
CCDC58-204ENST00000479414 SFTPA1Q8IWL2 248 aa6.37□□□□□ -1.39
CCDC58-204ENST00000479414 SYTL1Q8IYJ3 562 aa6.37□□□□□ -1.39
CCDC58-204ENST00000479414 BOLLQ8N9W6 283 aaKnown RBP6.37□□□□□ -1.39
CCDC58-204ENST00000479414 TMEM41AQ96HV5 264 aa6.37□□□□□ -1.39
CCDC58-204ENST00000479414 R3HDMLQ9H3Y0 253 aa6.37□□□□□ -1.39
CCDC58-204ENST00000479414 NKX1-2Q9UD57 310 aaPredicted RBP6.37□□□□□ -1.39
CCDC58-204ENST00000479414 WNT6Q9Y6F9 365 aa6.37□□□□□ -1.39
CCDC58-204ENST00000479414 ADAMTS3O15072 1205 aa6.36□□□□□ -1.39
CCDC58-204ENST00000479414 CCNT2O60583 730 aaKnown RBP6.36□□□□□ -1.39
CCDC58-204ENST00000479414 FGAP02671 866 aa6.36□□□□□ -1.39
CCDC58-204ENST00000479414 CREB1P16220 341 aa6.36□□□□□ -1.39
CCDC58-204ENST00000479414 PECAM1P16284 738 aaPredicted RBP6.36□□□□□ -1.39
CCDC58-204ENST00000479414 PDIA3P30101 505 aaKnown RBP6.36□□□□□ -1.39
CCDC58-204ENST00000479414 TECP42680 631 aa6.36□□□□□ -1.39
CCDC58-204ENST00000479414 CYP4F2P78329 520 aa6.36□□□□□ -1.39
CCDC58-204ENST00000479414 TNFAIP2Q03169 654 aa6.36□□□□□ -1.39
CCDC58-204ENST00000479414 GPS1Q13098 491 aa6.36□□□□□ -1.39
CCDC58-204ENST00000479414 STARD3Q14849 445 aa6.36□□□□□ -1.39
CCDC58-204ENST00000479414 ST3GAL2Q16842 350 aa6.36□□□□□ -1.39
CCDC58-204ENST00000479414 TMTC4Q5T4D3 741 aa6.36□□□□□ -1.39
CCDC58-204ENST00000479414 FBXO38Q6PIJ6 1188 aa6.36□□□□□ -1.39
CCDC58-204ENST00000479414 AMIGO2Q86SJ2 522 aa6.36□□□□□ -1.39
CCDC58-204ENST00000479414 C11orf44Q8N8P7 122 aa6.36□□□□□ -1.39
CCDC58-204ENST00000479414 SUN3Q8TAQ9 357 aa6.36□□□□□ -1.39
CCDC58-204ENST00000479414 ABHD5Q8WTS1 349 aa6.36□□□□□ -1.39
CCDC58-204ENST00000479414 REPS1Q96D71 796 aa6.36□□□□□ -1.39
CCDC58-204ENST00000479414 WDR24Q96S15 920 aa6.36□□□□□ -1.39
CCDC58-204ENST00000479414 DDX24Q9GZR7 859 aaKnown RBP eCLIP6.36□□□□□ -1.39
CCDC58-204ENST00000479414 C11orf21Q9P2W6 132 aa6.36□□□□□ -1.39
CCDC58-204ENST00000479414 LRCH1Q9Y2L9 728 aa6.36□□□□□ -1.39
CCDC58-204ENST00000479414 TARM1B6A8C7 271 aa6.35□□□□□ -1.39
CCDC58-204ENST00000479414 CES2O00748 559 aa6.35□□□□□ -1.39
CCDC58-204ENST00000479414 JTBO76095 146 aa6.35□□□□□ -1.39
CCDC58-204ENST00000479414 EIF4A1P60842 406 aaKnown RBP6.35□□□□□ -1.39
CCDC58-204ENST00000479414 PSG6Q00889 435 aa6.35□□□□□ -1.39
CCDC58-204ENST00000479414 MTAPQ13126 283 aa6.35□□□□□ -1.39
CCDC58-204ENST00000479414 ATP1A4Q13733 1029 aa6.35□□□□□ -1.39
CCDC58-204ENST00000479414 ACOX1Q15067 660 aa6.35□□□□□ -1.39
CCDC58-204ENST00000479414 RAB30Q15771 203 aa6.35□□□□□ -1.39
CCDC58-204ENST00000479414 L1TD1Q5T7N2 865 aaKnown RBP6.35□□□□□ -1.39
CCDC58-204ENST00000479414 ARL6IP4Q66PJ3 421 aaKnown RBP6.35□□□□□ -1.39
CCDC58-204ENST00000479414 CCDC174Q6PII3 467 aa6.35□□□□□ -1.39
CCDC58-204ENST00000479414 ENAHQ8N8S7 591 aaPredicted RBP6.35□□□□□ -1.39
CCDC58-204ENST00000479414 MUL1Q969V5 352 aa6.35□□□□□ -1.39
CCDC58-204ENST00000479414 TMEM8AQ9HCN3 771 aa6.35□□□□□ -1.39
CCDC58-204ENST00000479414 CA14Q9ULX7 337 aa6.35□□□□□ -1.39
CCDC58-204ENST00000479414 COX11Q9Y6N1 276 aa6.35□□□□□ -1.39
CCDC58-204ENST00000479414 LRRC3CA6NJW4 275 aa6.34□□□□□ -1.39
CCDC58-204ENST00000479414 TMPRSS11DO60235 418 aa6.34□□□□□ -1.39
CCDC58-204ENST00000479414 CBFA2T3O75081 653 aa6.34□□□□□ -1.39
CCDC58-204ENST00000479414 PDE8BO95263 885 aa6.34□□□□□ -1.39
CCDC58-204ENST00000479414 FPR3P25089 353 aa6.34□□□□□ -1.39
CCDC58-204ENST00000479414 MCM5P33992 734 aa6.34□□□□□ -1.39
CCDC58-204ENST00000479414 NHLH1Q02575 133 aa6.34□□□□□ -1.39
CCDC58-204ENST00000479414 NSUN2Q08J23 767 aaKnown RBP eCLIP6.34□□□□□ -1.39
CCDC58-204ENST00000479414 GRAMD1BQ3KR37 738 aa6.34□□□□□ -1.39
CCDC58-204ENST00000479414 RNASE12Q5GAN4 147 aaKnown RBP6.34□□□□□ -1.39
CCDC58-204ENST00000479414 NAPRTQ6XQN6 538 aa6.34□□□□□ -1.39
CCDC58-204ENST00000479414 RD3Q7Z3Z2 195 aa6.34□□□□□ -1.39
CCDC58-204ENST00000479414 FSTL5Q8N475 847 aaPredicted RBP6.34□□□□□ -1.39
CCDC58-204ENST00000479414 NELL1Q92832 810 aa6.34□□□□□ -1.39
CCDC58-204ENST00000479414 SNX18Q96RF0 628 aa6.34□□□□□ -1.39
CCDC58-204ENST00000479414 MACROD1Q9BQ69 325 aa6.34□□□□□ -1.39
CCDC58-204ENST00000479414 OBP2BQ9NPH6 170 aa6.34□□□□□ -1.39
CCDC58-204ENST00000479414 SNX15Q9NRS6 342 aa6.34□□□□□ -1.39
CCDC58-204ENST00000479414 SERGEFQ9UGK8 458 aa6.34□□□□□ -1.39
CCDC58-204ENST00000479414 RIPOR2Q9Y4F9 1068 aa6.34□□□□□ -1.39
CCDC58-204ENST00000479414 LGALS16A8MUM7 142 aa6.33□□□□□ -1.4
CCDC58-204ENST00000479414 IFRD1O00458 451 aaPredicted RBP6.33□□□□□ -1.4
CCDC58-204ENST00000479414 NBNO60934 754 aa6.33□□□□□ -1.4
CCDC58-204ENST00000479414 TCEA3O75764 348 aa6.33□□□□□ -1.4
CCDC58-204ENST00000479414 WDR47O94967 919 aa6.33□□□□□ -1.4
CCDC58-204ENST00000479414 TMEM225BP0DP42 221 aa6.33□□□□□ -1.4
CCDC58-204ENST00000479414 YY1P25490 414 aa6.33□□□□□ -1.4
CCDC58-204ENST00000479414 DIO1P49895 249 aa6.33□□□□□ -1.4
CCDC58-204ENST00000479414 HOXA4Q00056 320 aaPredicted RBP6.33□□□□□ -1.4
CCDC58-204ENST00000479414 PUM3Q15397 648 aaKnown RBP6.33□□□□□ -1.4
CCDC58-204ENST00000479414 DENND2CQ68D51 928 aa6.33□□□□□ -1.4
CCDC58-204ENST00000479414 KIRREL2Q6UWL6 708 aa6.33□□□□□ -1.4
CCDC58-204ENST00000479414 TRIM72Q6ZMU5 477 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms