RNA–Protein interactions for RNA: ENST00000478934.5

VPS52-217, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 2,602 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-217ENST00000478934 PYROXD2Q8N2H3 581 aa11.25□□□□□ -0.61
VPS52-217ENST00000478934 PPM1NQ8N819 430 aa11.25□□□□□ -0.61
VPS52-217ENST00000478934 FAM13CQ8NE31 585 aa11.25□□□□□ -0.61
VPS52-217ENST00000478934 PGLYRP2Q96PD5 576 aa11.25□□□□□ -0.61
VPS52-217ENST00000478934 MECRQ9BV79 373 aa11.25□□□□□ -0.61
VPS52-217ENST00000478934 MAF1Q9H063 256 aa11.25□□□□□ -0.61
VPS52-217ENST00000478934 PCDH18Q9HCL0 1135 aa11.25□□□□□ -0.61
VPS52-217ENST00000478934 KLK14Q9P0G3 267 aa11.25□□□□□ -0.61
VPS52-217ENST00000478934 SLC17A6Q9P2U8 582 aa11.25□□□□□ -0.61
VPS52-217ENST00000478934 SCN1AP35498 2009 aa11.25□□□□□ -0.61
VPS52-217ENST00000478934 CFAP69A5D8W1 941 aa11.24□□□□□ -0.61
VPS52-217ENST00000478934 H3BRB1 525 aa11.24□□□□□ -0.61
VPS52-217ENST00000478934 METTL18O95568 372 aa11.24□□□□□ -0.61
VPS52-217ENST00000478934 NEFHP12036 1026 aa11.24□□□□□ -0.61
VPS52-217ENST00000478934 BGNP21810 368 aa11.24□□□□□ -0.61
VPS52-217ENST00000478934 ADORA2BP29275 332 aa11.24□□□□□ -0.61
VPS52-217ENST00000478934 HDAC4P56524 1084 aa11.24□□□□□ -0.61
VPS52-217ENST00000478934 YWHAZP63104 245 aaKnown RBP11.24□□□□□ -0.61
VPS52-217ENST00000478934 RBP5P82980 135 aa11.24□□□□□ -0.61
VPS52-217ENST00000478934 ANKRD20A2Q5SQ80 823 aa11.24□□□□□ -0.61
VPS52-217ENST00000478934 ANKRD20A1Q5TYW2 823 aa11.24□□□□□ -0.61
VPS52-217ENST00000478934 ANKRD20A3Q5VUR7 823 aa11.24□□□□□ -0.61
VPS52-217ENST00000478934 TTC7BQ86TV6 843 aa11.24□□□□□ -0.61
VPS52-217ENST00000478934 CAND1Q86VP6 1230 aaKnown RBP11.24□□□□□ -0.61
VPS52-217ENST00000478934 SESTD1Q86VW0 696 aa11.24□□□□□ -0.61
VPS52-217ENST00000478934 RSRC1Q96IZ7 334 aaKnown RBP11.24□□□□□ -0.61
VPS52-217ENST00000478934 MPHOSPH6Q99547 160 aaKnown RBP11.24□□□□□ -0.61
VPS52-217ENST00000478934 ASB7Q9H672 318 aa11.24□□□□□ -0.61
VPS52-217ENST00000478934 TUT1Q9H6E5 874 aaKnown RBP11.24□□□□□ -0.61
VPS52-217ENST00000478934 GOLGA2P5Q9HBQ8 144 aa11.24□□□□□ -0.61
VPS52-217ENST00000478934 CYLDQ9NQC7 956 aa11.24□□□□□ -0.61
VPS52-217ENST00000478934 ETNK2Q9NVF9 386 aa11.24□□□□□ -0.61
VPS52-217ENST00000478934 ZFP69BQ9UJL9 534 aa11.24□□□□□ -0.61
VPS52-217ENST00000478934 PPME1Q9Y570 386 aa11.24□□□□□ -0.61
VPS52-217ENST00000478934 A0A1B0GUA9 196 aa11.24□□□□□ -0.61
VPS52-217ENST00000478934 MT-ND3P03897 115 aa11.24□□□□□ -0.61
VPS52-217ENST00000478934 LCP1P13796 627 aa11.24□□□□□ -0.61
VPS52-217ENST00000478934 CCND1P24385 295 aa11.24□□□□□ -0.61
VPS52-217ENST00000478934 HOXA11P31270 313 aaPredicted RBP11.24□□□□□ -0.61
VPS52-217ENST00000478934 PCK1P35558 622 aa11.24□□□□□ -0.61
VPS52-217ENST00000478934 SLC26A2P50443 739 aa11.24□□□□□ -0.61
VPS52-217ENST00000478934 BCAR1P56945 870 aa11.24□□□□□ -0.61
VPS52-217ENST00000478934 INCA1Q0VD86 236 aa11.24□□□□□ -0.61
VPS52-217ENST00000478934 MDH1BQ5I0G3 518 aa11.24□□□□□ -0.61
VPS52-217ENST00000478934 ZNF484Q5JVG2 852 aa11.24□□□□□ -0.61
VPS52-217ENST00000478934 CES4AQ5XG92 561 aa11.24□□□□□ -0.61
VPS52-217ENST00000478934 TRMT10BQ6PF06 316 aaKnown RBP11.24□□□□□ -0.61
VPS52-217ENST00000478934 OR6B3Q8NGW1 331 aa11.24□□□□□ -0.61
VPS52-217ENST00000478934 LENG1Q96BZ8 264 aaPredicted RBP11.24□□□□□ -0.61
VPS52-217ENST00000478934 GRAMD1AQ96CP6 724 aa11.24□□□□□ -0.61
VPS52-217ENST00000478934 CEP41Q9BYV8 373 aa11.24□□□□□ -0.61
VPS52-217ENST00000478934 CYP3A43Q9HB55 503 aa11.24□□□□□ -0.61
VPS52-217ENST00000478934 TXLNGQ9NUQ3 528 aa11.24□□□□□ -0.61
VPS52-217ENST00000478934 SUFUQ9UMX1 484 aa11.24□□□□□ -0.61
VPS52-217ENST00000478934 KCNH4Q9UQ05 1017 aa11.24□□□□□ -0.61
VPS52-217ENST00000478934 CCDC195A0A1B0GUA6 201 aa11.23□□□□□ -0.61
VPS52-217ENST00000478934 CYB561D2O14569 222 aa11.23□□□□□ -0.61
VPS52-217ENST00000478934 LPXNO60711 386 aa11.23□□□□□ -0.61
VPS52-217ENST00000478934 C1QAP02745 245 aa11.23□□□□□ -0.61
VPS52-217ENST00000478934 F7P08709 466 aaPredicted RBP11.23□□□□□ -0.61
VPS52-217ENST00000478934 ATICP31939 592 aa11.23□□□□□ -0.61
VPS52-217ENST00000478934 CPA2P48052 419 aa11.23□□□□□ -0.61
VPS52-217ENST00000478934 CRADDP78560 199 aa11.23□□□□□ -0.61
VPS52-217ENST00000478934 ZNF200P98182 395 aaPredicted RBP11.23□□□□□ -0.61
VPS52-217ENST00000478934 TNFAIP2Q03169 654 aa11.23□□□□□ -0.61
VPS52-217ENST00000478934 FAM187BQ17R55 369 aa11.23□□□□□ -0.61
VPS52-217ENST00000478934 EXOC8Q8IYI6 725 aa11.23□□□□□ -0.61
VPS52-217ENST00000478934 MIEF2Q96C03 454 aa11.23□□□□□ -0.61
VPS52-217ENST00000478934 CYTH2Q99418 400 aa11.23□□□□□ -0.61
VPS52-217ENST00000478934 PLCD4Q9BRC7 762 aa11.23□□□□□ -0.61
VPS52-217ENST00000478934 SLC13A1Q9BZW2 595 aa11.23□□□□□ -0.61
VPS52-217ENST00000478934 MANSC1Q9H8J5 431 aa11.23□□□□□ -0.61
VPS52-217ENST00000478934 ZNF408Q9H9D4 720 aa11.23□□□□□ -0.61
VPS52-217ENST00000478934 ARMCX1Q9P291 453 aa11.23□□□□□ -0.61
VPS52-217ENST00000478934 SYNJ2BP-COX16A0A087WUM0 186 aa11.23□□□□□ -0.61
VPS52-217ENST00000478934 TRIM49D1C9J1S8 452 aa11.23□□□□□ -0.61
VPS52-217ENST00000478934 SNAI1O95863 264 aaPredicted RBP11.23□□□□□ -0.61
VPS52-217ENST00000478934 OSBPP22059 807 aa11.23□□□□□ -0.61
VPS52-217ENST00000478934 PITX1P78337 314 aaPredicted RBP11.23□□□□□ -0.61
VPS52-217ENST00000478934 LAMC2Q13753 1193 aa11.23□□□□□ -0.61
VPS52-217ENST00000478934 GRIK4Q16099 956 aa11.23□□□□□ -0.61
VPS52-217ENST00000478934 SOWAHAQ2M3V2 549 aa11.23□□□□□ -0.61
VPS52-217ENST00000478934 KLHL38Q2WGJ6 581 aa11.23□□□□□ -0.61
VPS52-217ENST00000478934 PRAMEF19Q5SWL8 479 aa11.23□□□□□ -0.61
VPS52-217ENST00000478934 RGS9BPQ6ZS82 235 aa11.23□□□□□ -0.61
VPS52-217ENST00000478934 SH2D5Q6ZV89 423 aa11.23□□□□□ -0.61
VPS52-217ENST00000478934 CCDC185Q8N715 623 aa11.23□□□□□ -0.61
VPS52-217ENST00000478934 MIPEPQ99797 713 aa11.23□□□□□ -0.61
VPS52-217ENST00000478934 NFKBIZQ9BYH8 718 aa11.23□□□□□ -0.61
VPS52-217ENST00000478934 RNF39Q9H2S5 420 aa11.23□□□□□ -0.61
VPS52-217ENST00000478934 NXF3Q9H4D5 531 aaKnown RBP11.23□□□□□ -0.61
VPS52-217ENST00000478934 DHX35Q9H5Z1 703 aaKnown RBP11.23□□□□□ -0.61
VPS52-217ENST00000478934 VRTNQ9H8Y1 702 aa11.23□□□□□ -0.61
VPS52-217ENST00000478934 COX16Q9P0S2 106 aa11.23□□□□□ -0.61
VPS52-217ENST00000478934 SENP1Q9P0U3 644 aa11.23□□□□□ -0.61
VPS52-217ENST00000478934 CACNG4Q9UBN1 327 aa11.23□□□□□ -0.61
VPS52-217ENST00000478934 HEY2Q9UBP5 337 aa11.23□□□□□ -0.61
VPS52-217ENST00000478934 TTLL3Q9Y4R7 772 aa11.23□□□□□ -0.61
VPS52-217ENST00000478934 APOL1O14791 398 aa11.22□□□□□ -0.61
VPS52-217ENST00000478934 SPTLC1O15269 473 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms