RNA–Protein interactions for RNA: ENST00000478890.5

SRRM1-211, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 3

Gene SRRM1, Length 480 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-211ENST00000478890 IPCEF1Q8WWN9 437 aaPredicted RBP1.72□□□□□ -2.13
SRRM1-211ENST00000478890 SUCLG2Q96I99 432 aa1.72□□□□□ -2.13
SRRM1-211ENST00000478890 HIC2Q96JB3 615 aa1.72□□□□□ -2.13
SRRM1-211ENST00000478890 ZNF668Q96K58 619 aaPredicted RBP1.72□□□□□ -2.13
SRRM1-211ENST00000478890 SIGLEC11Q96RL6 698 aa1.72□□□□□ -2.13
SRRM1-211ENST00000478890 TRMOQ9BU70 441 aa1.72□□□□□ -2.13
SRRM1-211ENST00000478890 CINPQ9BW66 212 aaPredicted RBP1.72□□□□□ -2.13
SRRM1-211ENST00000478890 SLC12A5Q9H2X9 1139 aa1.72□□□□□ -2.13
SRRM1-211ENST00000478890 FAM204AQ9H8W3 233 aa1.72□□□□□ -2.13
SRRM1-211ENST00000478890 DDX56Q9NY93 547 aaKnown RBP1.72□□□□□ -2.13
SRRM1-211ENST00000478890 HEY2Q9UBP5 337 aa1.72□□□□□ -2.13
SRRM1-211ENST00000478890 NKX1-2Q9UD57 310 aaPredicted RBP1.72□□□□□ -2.13
SRRM1-211ENST00000478890 AFF4Q9UHB7 1163 aaKnown RBP1.72□□□□□ -2.13
SRRM1-211ENST00000478890 NOP58Q9Y2X3 529 aaKnown RBP1.72□□□□□ -2.13
SRRM1-211ENST00000478890 TTBK1Q5TCY1 1321 aaPredicted RBP1.71□□□□□ -2.14
SRRM1-211ENST00000478890 AQP7P3A6NL99 342 aa1.71□□□□□ -2.14
SRRM1-211ENST00000478890 FYB1O15117 783 aa1.71□□□□□ -2.14
SRRM1-211ENST00000478890 TBX3O15119 743 aa1.71□□□□□ -2.14
SRRM1-211ENST00000478890 CCP110O43303 1012 aa1.71□□□□□ -2.14
SRRM1-211ENST00000478890 SPRY2O43597 315 aa1.71□□□□□ -2.14
SRRM1-211ENST00000478890 MGEA5O60502 916 aa1.71□□□□□ -2.14
SRRM1-211ENST00000478890 ZC3H11AO75152 810 aaKnown RBP eCLIP1.71□□□□□ -2.14
SRRM1-211ENST00000478890 USP12O75317 370 aa1.71□□□□□ -2.14
SRRM1-211ENST00000478890 INMTO95050 263 aa1.71□□□□□ -2.14
SRRM1-211ENST00000478890 MAP4K4O95819 1239 aaPredicted RBP1.71□□□□□ -2.14
SRRM1-211ENST00000478890 ALPLP05186 524 aa1.71□□□□□ -2.14
SRRM1-211ENST00000478890 U2AF1L5P0DN76 240 aaPredicted RBP1.71□□□□□ -2.14
SRRM1-211ENST00000478890 EN2P19622 333 aaPredicted RBP1.71□□□□□ -2.14
SRRM1-211ENST00000478890 ADRA1DP25100 572 aa1.71□□□□□ -2.14
SRRM1-211ENST00000478890 ACVR2AP27037 513 aa1.71□□□□□ -2.14
SRRM1-211ENST00000478890 RBL1P28749 1068 aa1.71□□□□□ -2.14
SRRM1-211ENST00000478890 CPT1AP50416 773 aa1.71□□□□□ -2.14
SRRM1-211ENST00000478890 GATMP50440 423 aa1.71□□□□□ -2.14
SRRM1-211ENST00000478890 JAK3P52333 1124 aa1.71□□□□□ -2.14
SRRM1-211ENST00000478890 ARFIP2P53365 341 aa1.71□□□□□ -2.14
SRRM1-211ENST00000478890 SUMO3P55854 103 aaPredicted RBP1.71□□□□□ -2.14
SRRM1-211ENST00000478890 TIRAPP58753 221 aa1.71□□□□□ -2.14
SRRM1-211ENST00000478890 LINC00205P59089 165 aa1.71□□□□□ -2.14
SRRM1-211ENST00000478890 EIF4A1P60842 406 aaKnown RBP1.71□□□□□ -2.14
SRRM1-211ENST00000478890 HSF1Q00613 529 aa1.71□□□□□ -2.14
SRRM1-211ENST00000478890 U2AF1Q01081 240 aaKnown RBP eCLIP1.71□□□□□ -2.141e-12■■□□□ 14.4
SRRM1-211ENST00000478890 CFHR3Q02985 330 aa1.71□□□□□ -2.14
SRRM1-211ENST00000478890 CCDC15Q0P6D6 951 aa1.71□□□□□ -2.14
SRRM1-211ENST00000478890 MTA1Q13330 715 aa1.71□□□□□ -2.14
SRRM1-211ENST00000478890 SLC29A2Q14542 456 aa1.71□□□□□ -2.14
SRRM1-211ENST00000478890 TTF1Q15361 905 aaPredicted RBP1.71□□□□□ -2.14
SRRM1-211ENST00000478890 NPY5RQ15761 445 aa1.71□□□□□ -2.14
SRRM1-211ENST00000478890 C3orf38Q5JPI3 329 aa1.71□□□□□ -2.14
SRRM1-211ENST00000478890 MANEAQ5SRI9 462 aa1.71□□□□□ -2.14
SRRM1-211ENST00000478890 ZDHHC24Q6UX98 284 aa1.71□□□□□ -2.14
SRRM1-211ENST00000478890 NPNTQ6UXI9 565 aa1.71□□□□□ -2.14
SRRM1-211ENST00000478890 CLEC9AQ6UXN8 241 aa1.71□□□□□ -2.14
SRRM1-211ENST00000478890 MAEAQ7L5Y9 396 aa1.71□□□□□ -2.14
SRRM1-211ENST00000478890 LIX1LQ8IVB5 337 aa1.71□□□□□ -2.14
SRRM1-211ENST00000478890 TPH2Q8IWU9 490 aa1.71□□□□□ -2.14
SRRM1-211ENST00000478890 ADGRF4Q8IZF3 695 aa1.71□□□□□ -2.14
SRRM1-211ENST00000478890 TMEM199Q8N511 208 aa1.71□□□□□ -2.14
SRRM1-211ENST00000478890 SMRP1Q8NCR6 262 aa1.71□□□□□ -2.14
SRRM1-211ENST00000478890 OR56A3Q8NH54 315 aa1.71□□□□□ -2.14
SRRM1-211ENST00000478890 IL31RAQ8NI17 732 aa1.71□□□□□ -2.14
SRRM1-211ENST00000478890 PNISRQ8TF01 805 aaKnown RBP1.71□□□□□ -2.14
SRRM1-211ENST00000478890 PIGKQ92643 395 aa1.71□□□□□ -2.14
SRRM1-211ENST00000478890 COQ8BQ96D53 544 aa1.71□□□□□ -2.14
SRRM1-211ENST00000478890 WBP1Q96G27 269 aa1.71□□□□□ -2.14
SRRM1-211ENST00000478890 ZC3H10Q96K80 434 aaKnown RBP1.71□□□□□ -2.14
SRRM1-211ENST00000478890 LYZL4Q96KX0 146 aa1.71□□□□□ -2.14
SRRM1-211ENST00000478890 AIFM3Q96NN9 605 aa1.71□□□□□ -2.14
SRRM1-211ENST00000478890 HIST1H2AAQ96QV6 131 aa1.71□□□□□ -2.14
SRRM1-211ENST00000478890 TAAR9Q96RI9 348 aa1.71□□□□□ -2.14
SRRM1-211ENST00000478890 RHOBTB2Q9BYZ6 727 aa1.71□□□□□ -2.14
SRRM1-211ENST00000478890 NUAK2Q9H093 628 aa1.71□□□□□ -2.14
SRRM1-211ENST00000478890 HIPK2Q9H2X6 1198 aa1.71□□□□□ -2.14
SRRM1-211ENST00000478890 TCF7L1Q9HCS4 588 aa1.71□□□□□ -2.14
SRRM1-211ENST00000478890 TMEM45AQ9NWC5 275 aa1.71□□□□□ -2.14
SRRM1-211ENST00000478890 ZIM2Q9NZV7 527 aa1.71□□□□□ -2.14
SRRM1-211ENST00000478890 CPNE7Q9UBL6 633 aa1.71□□□□□ -2.14
SRRM1-211ENST00000478890 GABBR1Q9UBS5 961 aa1.71□□□□□ -2.14
SRRM1-211ENST00000478890 STEAP1Q9UHE8 339 aa1.71□□□□□ -2.14
SRRM1-211ENST00000478890 ZNF112Q9UJU3 913 aa1.71□□□□□ -2.14
SRRM1-211ENST00000478890 MID2Q9UJV3 735 aa1.71□□□□□ -2.14
SRRM1-211ENST00000478890 TPCN1Q9ULQ1 816 aa1.71□□□□□ -2.14
SRRM1-211ENST00000478890 NOB1Q9ULX3 412 aaKnown RBP1.71□□□□□ -2.14
SRRM1-211ENST00000478890 VPS4AQ9UN37 437 aa1.71□□□□□ -2.14
SRRM1-211ENST00000478890 PROCRQ9UNN8 238 aa1.71□□□□□ -2.14
SRRM1-211ENST00000478890 SLC8A2Q9UPR5 921 aa1.71□□□□□ -2.14
SRRM1-211ENST00000478890 LY6G6EA0A0G2JKS1 128 aa1.7□□□□□ -2.14
SRRM1-211ENST00000478890 A8MVJ9 347 aa1.7□□□□□ -2.14
SRRM1-211ENST00000478890 F8W810 466 aa1.7□□□□□ -2.14
SRRM1-211ENST00000478890 PRPF3O43395 683 aaKnown RBP1.7□□□□□ -2.14
SRRM1-211ENST00000478890 CA12O43570 354 aa1.7□□□□□ -2.14
SRRM1-211ENST00000478890 TLR2O60603 784 aa1.7□□□□□ -2.14
SRRM1-211ENST00000478890 PARP1P09874 1014 aaKnown RBP1.7□□□□□ -2.14
SRRM1-211ENST00000478890 TMEM225BP0DP42 221 aa1.7□□□□□ -2.14
SRRM1-211ENST00000478890 CTSAP10619 480 aa1.7□□□□□ -2.14
SRRM1-211ENST00000478890 NTSR1P30989 418 aa1.7□□□□□ -2.14
SRRM1-211ENST00000478890 IL6STP40189 918 aaPredicted RBP1.7□□□□□ -2.14
SRRM1-211ENST00000478890 CARSP49589 748 aaKnown RBP1.7□□□□□ -2.14
SRRM1-211ENST00000478890 THBS3P49746 956 aa1.7□□□□□ -2.14
SRRM1-211ENST00000478890 VPS41P49754 854 aa1.7□□□□□ -2.14
SRRM1-211ENST00000478890 RAB27AP51159 221 aa1.7□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms