RNA–Protein interactions for RNA: ENST00000478746.1

VIM-204, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 757 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-204ENST00000478746 A0A1B0GTW7 788 aa18.21■□□□□ 0.51
VIM-204ENST00000478746 A8MXQ7 604 aa18.21■□□□□ 0.51
VIM-204ENST00000478746 CD6P30203 668 aa18.21■□□□□ 0.51
VIM-204ENST00000478746 KIAA1324Q6UXG2 1013 aaKnown RBP18.21■□□□□ 0.51
VIM-204ENST00000478746 TMPRSS7Q7RTY8 843 aa18.21■□□□□ 0.51
VIM-204ENST00000478746 TRAPPC11Q7Z392 1133 aa18.21■□□□□ 0.51
VIM-204ENST00000478746 CBWD2Q8IUF1 395 aa18.21■□□□□ 0.51
VIM-204ENST00000478746 WDR49Q8IV35 697 aa18.21■□□□□ 0.51
VIM-204ENST00000478746 SCAMP5Q8TAC9 235 aa18.21■□□□□ 0.51
VIM-204ENST00000478746 DNASE2BQ8WZ79 361 aa18.21■□□□□ 0.51
VIM-204ENST00000478746 KCNK16Q96T55 309 aa18.21■□□□□ 0.51
VIM-204ENST00000478746 BBS2Q9BXC9 721 aa18.21■□□□□ 0.51
VIM-204ENST00000478746 NACA2Q9H009 215 aa18.21■□□□□ 0.51
VIM-204ENST00000478746 WDR35Q9P2L0 1181 aa18.21■□□□□ 0.51
VIM-204ENST00000478746 CELSR3Q9NYQ7 3312 aa18.21■□□□□ 0.51
VIM-204ENST00000478746 MEI4A8MW99 385 aa18.2■□□□□ 0.5
VIM-204ENST00000478746 PRRT4C9JH25 899 aa18.2■□□□□ 0.5
VIM-204ENST00000478746 NEDD8-MDP1E9PL57 170 aa18.2■□□□□ 0.5
VIM-204ENST00000478746 GFRA2O00451 464 aa18.2■□□□□ 0.5
VIM-204ENST00000478746 ZIC2O95409 532 aaPredicted RBP18.2■□□□□ 0.5
VIM-204ENST00000478746 TYRP14679 529 aa18.2■□□□□ 0.5
VIM-204ENST00000478746 TUBP50607 506 aa18.2■□□□□ 0.5
VIM-204ENST00000478746 TNNC1P63316 161 aa18.2■□□□□ 0.5
VIM-204ENST00000478746 WDR72Q3MJ13 1102 aa18.2■□□□□ 0.5
VIM-204ENST00000478746 HTR3DQ70Z44 454 aa18.2■□□□□ 0.5
VIM-204ENST00000478746 B3GALNT2Q8NCR0 500 aa18.2■□□□□ 0.5
VIM-204ENST00000478746 FGFBP2Q9BYJ0 223 aa18.2■□□□□ 0.5
VIM-204ENST00000478746 MIR1-1HGQ9H1L0 117 aa18.2■□□□□ 0.5
VIM-204ENST00000478746 GAREM1Q9H706 876 aa18.2■□□□□ 0.5
VIM-204ENST00000478746 PANK4Q9NVE7 773 aa18.2■□□□□ 0.5
VIM-204ENST00000478746 PPP4R2Q9NY27 417 aa18.2■□□□□ 0.5
VIM-204ENST00000478746 CACNA2D2Q9NY47 1150 aa18.2■□□□□ 0.5
VIM-204ENST00000478746 DKK4Q9UBT3 224 aa18.2■□□□□ 0.5
VIM-204ENST00000478746 BPTFQ12830 3046 aa18.2■□□□□ 0.5
VIM-204ENST00000478746 GOLGA4Q13439 2230 aaKnown RBP18.19■□□□□ 0.5
VIM-204ENST00000478746 WASH3PC4AMC7 463 aa18.19■□□□□ 0.5
VIM-204ENST00000478746 CACNG3O60359 315 aa18.19■□□□□ 0.5
VIM-204ENST00000478746 FLNBO75369 2602 aaKnown RBP18.19■□□□□ 0.5
VIM-204ENST00000478746 TPGS1Q6ZTW0 290 aa18.19■□□□□ 0.5
VIM-204ENST00000478746 GLIS3Q8NEA6 775 aa18.19■□□□□ 0.5
VIM-204ENST00000478746 TOE1Q96GM8 510 aaKnown RBP18.19■□□□□ 0.5
VIM-204ENST00000478746 MED10Q9BTT4 135 aa18.19■□□□□ 0.5
VIM-204ENST00000478746 GPR174Q9BXC1 333 aa18.19■□□□□ 0.5
VIM-204ENST00000478746 IL21RQ9HBE5 538 aa18.19■□□□□ 0.5
VIM-204ENST00000478746 KIAA1586Q9HCI6 787 aa18.19■□□□□ 0.5
VIM-204ENST00000478746 TM7SF3Q9NS93 570 aa18.19■□□□□ 0.5
VIM-204ENST00000478746 WSB2Q9NYS7 404 aaPredicted RBP18.19■□□□□ 0.5
VIM-204ENST00000478746 IL37Q9NZH6 218 aa18.19■□□□□ 0.5
VIM-204ENST00000478746 GMIPQ9P107 970 aa18.19■□□□□ 0.5
VIM-204ENST00000478746 NFE2L3Q9Y4A8 694 aa18.19■□□□□ 0.5
VIM-204ENST00000478746 ATP8B3O60423 1300 aa18.19■□□□□ 0.5
VIM-204ENST00000478746 CER1O95813 267 aa18.18■□□□□ 0.5
VIM-204ENST00000478746 ZDHHC11BP0C7U3 371 aa18.18■□□□□ 0.5
VIM-204ENST00000478746 ZNF883P0CG24 379 aa18.18■□□□□ 0.5
VIM-204ENST00000478746 NCAM1P13591 858 aa18.18■□□□□ 0.5
VIM-204ENST00000478746 TNNI1P19237 187 aa18.18■□□□□ 0.5
VIM-204ENST00000478746 MATKP42679 507 aa18.18■□□□□ 0.5
VIM-204ENST00000478746 DGKGP49619 791 aa18.18■□□□□ 0.5
VIM-204ENST00000478746 SLC5A3P53794 718 aa18.18■□□□□ 0.5
VIM-204ENST00000478746 CYP4F3Q08477 520 aa18.18■□□□□ 0.5
VIM-204ENST00000478746 LARP1BQ659C4 914 aaKnown RBP18.18■□□□□ 0.5
VIM-204ENST00000478746 BRAPQ7Z569 592 aa18.18■□□□□ 0.5
VIM-204ENST00000478746 METTL3Q86U44 580 aaKnown RBP18.18■□□□□ 0.5
VIM-204ENST00000478746 ZCCHC9Q8N567 271 aaKnown RBP18.18■□□□□ 0.5
VIM-204ENST00000478746 RDH13Q8NBN7 331 aa18.18■□□□□ 0.5
VIM-204ENST00000478746 CADM4Q8NFZ8 388 aa18.18■□□□□ 0.5
VIM-204ENST00000478746 RHBDD1Q8TEB9 315 aa18.18■□□□□ 0.5
VIM-204ENST00000478746 CDC6Q99741 560 aa18.18■□□□□ 0.5
VIM-204ENST00000478746 PRDM16Q9HAZ2 1276 aa18.18■□□□□ 0.5
VIM-204ENST00000478746 ITM2CQ9NQX7 267 aa18.18■□□□□ 0.5
VIM-204ENST00000478746 COMMD8Q9NX08 183 aa18.18■□□□□ 0.5
VIM-204ENST00000478746 HSPBP1Q9NZL4 362 aa18.18■□□□□ 0.5
VIM-204ENST00000478746 HELZ2Q9BYK8 2649 aaKnown RBP18.18■□□□□ 0.5
VIM-204ENST00000478746 FRMD3A2A2Y4 597 aa18.17■□□□□ 0.5
VIM-204ENST00000478746 TRABD2BA6NFA1 517 aa18.17■□□□□ 0.5
VIM-204ENST00000478746 BCAT2O15382 392 aaPredicted RBP18.17■□□□□ 0.5
VIM-204ENST00000478746 CILPO75339 1184 aa18.17■□□□□ 0.5
VIM-204ENST00000478746 ATXN1LP0C7T5 689 aaKnown RBP18.17■□□□□ 0.5
VIM-204ENST00000478746 DLATP10515 647 aaKnown RBP18.17■□□□□ 0.5
VIM-204ENST00000478746 TXLNAP40222 546 aa18.17■□□□□ 0.5
VIM-204ENST00000478746 STARD3Q14849 445 aa18.17■□□□□ 0.5
VIM-204ENST00000478746 IL27RAQ6UWB1 636 aa18.17■□□□□ 0.5
VIM-204ENST00000478746 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.17■□□□□ 0.5
VIM-204ENST00000478746 NXF1Q9UBU9 619 aaKnown RBP18.17■□□□□ 0.5
VIM-204ENST00000478746 GOLGA8CPA6NN73 597 aa18.16■□□□□ 0.5
VIM-204ENST00000478746 GREM1O60565 184 aa18.16■□□□□ 0.5
VIM-204ENST00000478746 TLR5O60602 858 aa18.16■□□□□ 0.5
VIM-204ENST00000478746 TBX18O95935 607 aa18.16■□□□□ 0.5
VIM-204ENST00000478746 CISD3P0C7P0 127 aa18.16■□□□□ 0.5
VIM-204ENST00000478746 TRPC3Q13507 836 aa18.16■□□□□ 0.5
VIM-204ENST00000478746 HLA-BQ31612 363 aa18.16■□□□□ 0.5
VIM-204ENST00000478746 DCAF12L1Q5VU92 463 aa18.16■□□□□ 0.5
VIM-204ENST00000478746 DBX2Q6ZNG2 339 aa18.16■□□□□ 0.5
VIM-204ENST00000478746 PAQR9Q6ZVX9 377 aa18.16■□□□□ 0.5
VIM-204ENST00000478746 STXBP4Q6ZWJ1 553 aa18.16■□□□□ 0.5
VIM-204ENST00000478746 MARCH9Q86YJ5 346 aa18.16■□□□□ 0.5
VIM-204ENST00000478746 GALNT15Q8N3T1 639 aa18.16■□□□□ 0.5
VIM-204ENST00000478746 TMX3Q96JJ7 454 aa18.16■□□□□ 0.5
VIM-204ENST00000478746 KLF16Q9BXK1 252 aaPredicted RBP18.16■□□□□ 0.5
VIM-204ENST00000478746 PANK2Q9BZ23 570 aa18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms