RNA–Protein interactions for RNA: ENST00000478658.1

USF3-202, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene USF3, Length 8,461 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-202ENST00000478658 MSANTD3Q96H12 275 aa5.58□□□□□ -1.52
USF3-202ENST00000478658 PPP1R16AQ96I34 528 aa5.58□□□□□ -1.52
USF3-202ENST00000478658 CEP170P1Q96L14 293 aa5.58□□□□□ -1.52
USF3-202ENST00000478658 THUMPD3Q9BV44 507 aaKnown RBP5.58□□□□□ -1.52
USF3-202ENST00000478658 MFSD1Q9H3U5 465 aa5.58□□□□□ -1.52
USF3-202ENST00000478658 NOL11Q9H8H0 719 aaKnown RBP5.58□□□□□ -1.52
USF3-202ENST00000478658 MIEF1Q9NQG6 463 aa5.58□□□□□ -1.52
USF3-202ENST00000478658 SHOC2Q9UQ13 582 aa5.58□□□□□ -1.52
USF3-202ENST00000478658 MAP3K2Q9Y2U5 619 aa5.58□□□□□ -1.52
USF3-202ENST00000478658 PCDHGC5Q9Y5F6 944 aa5.58□□□□□ -1.52
USF3-202ENST00000478658 ISPDA4D126 451 aa5.58□□□□□ -1.52
USF3-202ENST00000478658 C5orf51A6NDU8 294 aa5.58□□□□□ -1.52
USF3-202ENST00000478658 NPTXRO95502 500 aa5.58□□□□□ -1.52
USF3-202ENST00000478658 FESP07332 822 aa5.58□□□□□ -1.52
USF3-202ENST00000478658 RPL13AP40429 203 aaKnown RBP5.58□□□□□ -1.52
USF3-202ENST00000478658 HAND2P61296 217 aa5.58□□□□□ -1.52
USF3-202ENST00000478658 TOP3AQ13472 1001 aaPredicted RBP5.58□□□□□ -1.52
USF3-202ENST00000478658 GRB14Q14449 540 aa5.58□□□□□ -1.52
USF3-202ENST00000478658 RAB39AQ14964 217 aa5.58□□□□□ -1.52
USF3-202ENST00000478658 RRAGAQ7L523 313 aa5.58□□□□□ -1.52
USF3-202ENST00000478658 FERMT3Q86UX7 667 aa5.58□□□□□ -1.52
USF3-202ENST00000478658 TMEM17Q86X19 198 aa5.58□□□□□ -1.52
USF3-202ENST00000478658 PPM1KQ8N3J5 372 aa5.58□□□□□ -1.52
USF3-202ENST00000478658 NEK7Q8TDX7 302 aa5.58□□□□□ -1.52
USF3-202ENST00000478658 MARK4Q96L34 752 aa5.58□□□□□ -1.52
USF3-202ENST00000478658 ASB2Q96Q27 587 aa5.58□□□□□ -1.52
USF3-202ENST00000478658 CHP1Q99653 195 aa5.58□□□□□ -1.52
USF3-202ENST00000478658 PITPNM3Q9BZ71 974 aa5.58□□□□□ -1.52
USF3-202ENST00000478658 DSEQ9UL01 958 aa5.58□□□□□ -1.52
USF3-202ENST00000478658 ENTPD4Q9Y227 616 aa5.58□□□□□ -1.52
USF3-202ENST00000478658 MYO1GB0I1T2 1018 aa5.58□□□□□ -1.52
USF3-202ENST00000478658 SNAP23O00161 211 aa5.58□□□□□ -1.52
USF3-202ENST00000478658 EI24O14681 340 aa5.58□□□□□ -1.52
USF3-202ENST00000478658 MYL12BO14950 172 aa5.58□□□□□ -1.52
USF3-202ENST00000478658 GPC1P35052 558 aa5.58□□□□□ -1.52
USF3-202ENST00000478658 ABCB5Q2M3G0 1257 aa5.58□□□□□ -1.52
USF3-202ENST00000478658 ISLR2Q6UXK2 745 aa5.58□□□□□ -1.52
USF3-202ENST00000478658 ZNF720Q7Z2F6 126 aa5.58□□□□□ -1.52
USF3-202ENST00000478658 GPR141Q7Z602 305 aa5.58□□□□□ -1.52
USF3-202ENST00000478658 CABP7Q86V35 215 aa5.58□□□□□ -1.52
USF3-202ENST00000478658 APOBEC3FQ8IUX4 373 aaKnown RBP5.58□□□□□ -1.52
USF3-202ENST00000478658 C7orf31Q8N865 590 aa5.58□□□□□ -1.52
USF3-202ENST00000478658 SLC7A14Q8TBB6 771 aa5.58□□□□□ -1.52
USF3-202ENST00000478658 CIDECQ96AQ7 238 aaPredicted RBP5.58□□□□□ -1.52
USF3-202ENST00000478658 FGGYQ96C11 551 aa5.58□□□□□ -1.52
USF3-202ENST00000478658 CALN1Q9BXU9 219 aa5.58□□□□□ -1.52
USF3-202ENST00000478658 LRRC2Q9BYS8 371 aa5.58□□□□□ -1.52
USF3-202ENST00000478658 SP140LQ9H930 580 aa5.58□□□□□ -1.52
USF3-202ENST00000478658 CBX8Q9HC52 389 aa5.58□□□□□ -1.52
USF3-202ENST00000478658 COMMD3Q9UBI1 195 aa5.58□□□□□ -1.52
USF3-202ENST00000478658 RABL2AQ9UBK7 228 aaPredicted RBP5.58□□□□□ -1.52
USF3-202ENST00000478658 PHTF1Q9UMS5 762 aa5.58□□□□□ -1.52
USF3-202ENST00000478658 RABL2BQ9UNT1 228 aa5.58□□□□□ -1.52
USF3-202ENST00000478658 TPRKBQ9Y3C4 175 aa5.58□□□□□ -1.52
USF3-202ENST00000478658 PCDHB15Q9Y5E8 787 aa5.58□□□□□ -1.52
USF3-202ENST00000478658 COMMD3-BMI1R4GMX3 469 aa5.58□□□□□ -1.52
USF3-202ENST00000478658 ATXN2Q99700 1313 aaKnown RBP5.58□□□□□ -1.52
USF3-202ENST00000478658 KCNQ3O43525 872 aa5.58□□□□□ -1.52
USF3-202ENST00000478658 UGT2B11O75310 529 aa5.58□□□□□ -1.52
USF3-202ENST00000478658 TOP3BO95985 862 aaKnown RBP5.58□□□□□ -1.52
USF3-202ENST00000478658 DLSTP36957 453 aa5.58□□□□□ -1.52
USF3-202ENST00000478658 CCT3P49368 545 aaKnown RBP5.58□□□□□ -1.52
USF3-202ENST00000478658 MMP14P50281 582 aa5.58□□□□□ -1.52
USF3-202ENST00000478658 EIF4A2Q14240 407 aaKnown RBP5.58□□□□□ -1.52
USF3-202ENST00000478658 ZNF667Q5HYK9 610 aa5.58□□□□□ -1.52
USF3-202ENST00000478658 TMEM132EQ6IEE7 984 aa5.58□□□□□ -1.52
USF3-202ENST00000478658 KCNIP4Q6PIL6 250 aa5.58□□□□□ -1.52
USF3-202ENST00000478658 VSTM1Q6UX27 236 aa5.58□□□□□ -1.52
USF3-202ENST00000478658 Q6ZUG5 572 aa5.58□□□□□ -1.52
USF3-202ENST00000478658 CCNJLQ8IV13 435 aa5.58□□□□□ -1.52
USF3-202ENST00000478658 ECSITQ9BQ95 431 aa5.58□□□□□ -1.52
USF3-202ENST00000478658 TTYH1Q9H313 450 aaPredicted RBP5.58□□□□□ -1.52
USF3-202ENST00000478658 UXTQ9UBK9 157 aaPredicted RBP5.58□□□□□ -1.52
USF3-202ENST00000478658 SLC35F4A4IF30 521 aa5.58□□□□□ -1.52
USF3-202ENST00000478658 C2orf72A6NCS6 295 aa5.58□□□□□ -1.52
USF3-202ENST00000478658 E2F3O00716 465 aa5.58□□□□□ -1.52
USF3-202ENST00000478658 MTA2O94776 668 aa5.58□□□□□ -1.52
USF3-202ENST00000478658 CD4P01730 458 aa5.58□□□□□ -1.52
USF3-202ENST00000478658 PRKAR1AP10644 381 aa5.58□□□□□ -1.52
USF3-202ENST00000478658 PLA2G4AP47712 749 aa5.58□□□□□ -1.52
USF3-202ENST00000478658 PCK2Q16822 640 aa5.58□□□□□ -1.52
USF3-202ENST00000478658 DCAF4L1Q3SXM0 396 aa5.58□□□□□ -1.52
USF3-202ENST00000478658 ACSM2BQ68CK6 577 aa5.58□□□□□ -1.52
USF3-202ENST00000478658 RGS9BPQ6ZS82 235 aa5.58□□□□□ -1.52
USF3-202ENST00000478658 FBXO11Q86XK2 927 aa5.58□□□□□ -1.52
USF3-202ENST00000478658 NAT16Q8N8M0 369 aa5.58□□□□□ -1.52
USF3-202ENST00000478658 C22orf15Q8WYQ4 148 aa5.58□□□□□ -1.52
USF3-202ENST00000478658 EME1Q96AY2 570 aa5.58□□□□□ -1.52
USF3-202ENST00000478658 HEXIM2Q96MH2 286 aaKnown RBP5.58□□□□□ -1.52
USF3-202ENST00000478658 BTBD7Q9P203 1132 aa5.58□□□□□ -1.52
USF3-202ENST00000478658 GABBR1Q9UBS5 961 aa5.58□□□□□ -1.52
USF3-202ENST00000478658 RCOR1Q9UKL0 485 aa5.58□□□□□ -1.52
USF3-202ENST00000478658 MAFKO60675 156 aa5.58□□□□□ -1.52
USF3-202ENST00000478658 CTNND1O60716 968 aaKnown RBP5.58□□□□□ -1.52
USF3-202ENST00000478658 TNFAIP8O95379 198 aa5.58□□□□□ -1.52
USF3-202ENST00000478658 CALB2P22676 271 aa5.58□□□□□ -1.52
USF3-202ENST00000478658 MYL9P24844 172 aa5.58□□□□□ -1.52
USF3-202ENST00000478658 CDC25CP30307 473 aa5.58□□□□□ -1.52
USF3-202ENST00000478658 GSTT1P30711 240 aa5.58□□□□□ -1.52
USF3-202ENST00000478658 TTLL4Q14679 1199 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms