RNA–Protein interactions for RNA: ENST00000478573.6

CDC42BPA-212, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-212ENST00000478573 SEMA4CQ9C0C4 833 aa4.81□□□□□ -1.64
CDC42BPA-212ENST00000478573 TTYH3Q9C0H2 523 aa4.81□□□□□ -1.64
CDC42BPA-212ENST00000478573 TMX2Q9Y320 296 aa4.81□□□□□ -1.64
CDC42BPA-212ENST00000478573 RICTORQ6R327 1708 aa4.8□□□□□ -1.64
CDC42BPA-212ENST00000478573 PCF11O94913 1555 aaKnown RBP4.8□□□□□ -1.64
CDC42BPA-212ENST00000478573 A0A087WV62 115 aa4.8□□□□□ -1.64
CDC42BPA-212ENST00000478573 H0YIZ8 118 aa4.8□□□□□ -1.64
CDC42BPA-212ENST00000478573 THAP12O43422 761 aa4.8□□□□□ -1.64
CDC42BPA-212ENST00000478573 PLA2G6O60733 806 aa4.8□□□□□ -1.64
CDC42BPA-212ENST00000478573 TXNP10599 105 aaKnown RBP4.8□□□□□ -1.64
CDC42BPA-212ENST00000478573 CYP2C9P11712 490 aa4.8□□□□□ -1.64
CDC42BPA-212ENST00000478573 HARSP12081 509 aaKnown RBP4.8□□□□□ -1.64
CDC42BPA-212ENST00000478573 XRCC6P12956 609 aaKnown RBP eCLIP4.8□□□□□ -1.64
CDC42BPA-212ENST00000478573 CERS1P27544 350 aa4.8□□□□□ -1.64
CDC42BPA-212ENST00000478573 CYP2C18P33260 490 aa4.8□□□□□ -1.64
CDC42BPA-212ENST00000478573 TECP42680 631 aa4.8□□□□□ -1.64
CDC42BPA-212ENST00000478573 HSPA7P48741 367 aa4.8□□□□□ -1.64
CDC42BPA-212ENST00000478573 SSBP2P81877 361 aaPredicted RBP4.8□□□□□ -1.64
CDC42BPA-212ENST00000478573 MPEG1Q2M385 716 aa4.8□□□□□ -1.64
CDC42BPA-212ENST00000478573 SUPT20HL1Q3ZLR7 823 aa4.8□□□□□ -1.64
CDC42BPA-212ENST00000478573 CEP78Q5JTW2 689 aa4.8□□□□□ -1.64
CDC42BPA-212ENST00000478573 DCAF12L1Q5VU92 463 aa4.8□□□□□ -1.64
CDC42BPA-212ENST00000478573 SLC18B1Q6NT16 456 aa4.8□□□□□ -1.64
CDC42BPA-212ENST00000478573 C11orf87Q6NUJ2 197 aa4.8□□□□□ -1.64
CDC42BPA-212ENST00000478573 SLC2A7Q6PXP3 512 aa4.8□□□□□ -1.64
CDC42BPA-212ENST00000478573 UNC13DQ70J99 1090 aa4.8□□□□□ -1.64
CDC42BPA-212ENST00000478573 ZNF804AQ7Z570 1209 aa4.8□□□□□ -1.64
CDC42BPA-212ENST00000478573 GAS2L3Q86XJ1 694 aa4.8□□□□□ -1.64
CDC42BPA-212ENST00000478573 SLC15A4Q8N697 577 aa4.8□□□□□ -1.64
CDC42BPA-212ENST00000478573 IPCEF1Q8WWN9 437 aaPredicted RBP4.8□□□□□ -1.64
CDC42BPA-212ENST00000478573 TBC1D5Q92609 795 aa4.8□□□□□ -1.64
CDC42BPA-212ENST00000478573 REPS1Q96D71 796 aa4.8□□□□□ -1.64
CDC42BPA-212ENST00000478573 MOGAT1Q96PD6 335 aa4.8□□□□□ -1.64
CDC42BPA-212ENST00000478573 GDF15Q99988 308 aa4.8□□□□□ -1.64
CDC42BPA-212ENST00000478573 STK33Q9BYT3 514 aa4.8□□□□□ -1.64
CDC42BPA-212ENST00000478573 CHST8Q9H2A9 424 aa4.8□□□□□ -1.64
CDC42BPA-212ENST00000478573 XPR1Q9UBH6 696 aa4.8□□□□□ -1.64
CDC42BPA-212ENST00000478573 HESX1Q9UBX0 185 aa4.8□□□□□ -1.64
CDC42BPA-212ENST00000478573 CDC23Q9UJX2 597 aa4.8□□□□□ -1.64
CDC42BPA-212ENST00000478573 TBC1D30Q9Y2I9 924 aa4.8□□□□□ -1.64
CDC42BPA-212ENST00000478573 PCDHGB2Q9Y5G2 931 aa4.8□□□□□ -1.64
CDC42BPA-212ENST00000478573 MAGI3Q5TCQ9 1506 aa4.79□□□□□ -1.64
CDC42BPA-212ENST00000478573 TISP43B9A030 160 aa4.79□□□□□ -1.64
CDC42BPA-212ENST00000478573 MYO1CO00159 1063 aa4.79□□□□□ -1.64
CDC42BPA-212ENST00000478573 PPP6CO00743 305 aa4.79□□□□□ -1.64
CDC42BPA-212ENST00000478573 ZNF213O14771 459 aa4.79□□□□□ -1.64
CDC42BPA-212ENST00000478573 HNRNPDLO14979 420 aaKnown RBP4.79□□□□□ -1.64
CDC42BPA-212ENST00000478573 LATS1O95835 1130 aa4.79□□□□□ -1.64
CDC42BPA-212ENST00000478573 ENGP17813 658 aa4.79□□□□□ -1.64
CDC42BPA-212ENST00000478573 EEF1GP26641 437 aaKnown RBP4.79□□□□□ -1.64
CDC42BPA-212ENST00000478573 CARSP49589 748 aaKnown RBP4.79□□□□□ -1.64
CDC42BPA-212ENST00000478573 TOB1P50616 345 aaPredicted RBP4.79□□□□□ -1.64
CDC42BPA-212ENST00000478573 PDE1AP54750 535 aa4.79□□□□□ -1.64
CDC42BPA-212ENST00000478573 EEFSECP57772 596 aaKnown RBP4.79□□□□□ -1.64
CDC42BPA-212ENST00000478573 MAPK7Q13164 816 aa4.79□□□□□ -1.64
CDC42BPA-212ENST00000478573 BOP1Q14137 746 aaKnown RBP4.79□□□□□ -1.64
CDC42BPA-212ENST00000478573 TMEM95Q3KNT9 176 aa4.79□□□□□ -1.64
CDC42BPA-212ENST00000478573 PCID2Q5JVF3 399 aa4.79□□□□□ -1.64
CDC42BPA-212ENST00000478573 TREML2Q5T2D2 321 aa4.79□□□□□ -1.64
CDC42BPA-212ENST00000478573 MORN5Q5VZ52 161 aa4.79□□□□□ -1.64
CDC42BPA-212ENST00000478573 SLC9A4Q6AI14 798 aa4.79□□□□□ -1.64
CDC42BPA-212ENST00000478573 LAYNQ6UX15 382 aa4.79□□□□□ -1.64
CDC42BPA-212ENST00000478573 NAPRTQ6XQN6 538 aa4.79□□□□□ -1.64
CDC42BPA-212ENST00000478573 CNGA4Q8IV77 575 aa4.79□□□□□ -1.64
CDC42BPA-212ENST00000478573 FAM109AQ8N4B1 249 aa4.79□□□□□ -1.64
CDC42BPA-212ENST00000478573 LRRC71Q8N4P6 559 aa4.79□□□□□ -1.64
CDC42BPA-212ENST00000478573 NKAPQ8N5F7 415 aaKnown RBP4.79□□□□□ -1.64
CDC42BPA-212ENST00000478573 CYP2W1Q8TAV3 490 aa4.79□□□□□ -1.64
CDC42BPA-212ENST00000478573 SPSB4Q96A44 273 aa4.79□□□□□ -1.64
CDC42BPA-212ENST00000478573 ZNF48Q96MX3 618 aaPredicted RBP4.79□□□□□ -1.64
CDC42BPA-212ENST00000478573 SLC46A1Q96NT5 459 aa4.79□□□□□ -1.64
CDC42BPA-212ENST00000478573 MESP1Q9BRJ9 268 aa4.79□□□□□ -1.64
CDC42BPA-212ENST00000478573 DHX36Q9H2U1 1008 aaKnown RBP4.79□□□□□ -1.64
CDC42BPA-212ENST00000478573 PPCSQ9HAB8 311 aa4.79□□□□□ -1.64
CDC42BPA-212ENST00000478573 XPNPEP3Q9NQH7 507 aa4.79□□□□□ -1.64
CDC42BPA-212ENST00000478573 SERTAD3Q9UJW9 196 aa4.79□□□□□ -1.64
CDC42BPA-212ENST00000478573 CCNL1Q9UK58 526 aaPredicted RBP4.79□□□□□ -1.64
CDC42BPA-212ENST00000478573 KIF14Q15058 1648 aa4.79□□□□□ -1.64
CDC42BPA-212ENST00000478573 PREX2Q70Z35 1606 aa4.79□□□□□ -1.64
CDC42BPA-212ENST00000478573 ARAP3Q8WWN8 1544 aa4.78□□□□□ -1.64
CDC42BPA-212ENST00000478573 CDC42BPAQ5VT25 1732 aa4.78□□□□□ -1.64
CDC42BPA-212ENST00000478573 ITSN2Q9NZM3 1697 aa4.78□□□□□ -1.64
CDC42BPA-212ENST00000478573 NUP153P49790 1475 aaKnown RBP4.78□□□□□ -1.64
CDC42BPA-212ENST00000478573 TMEM233B4DJY2 109 aa4.78□□□□□ -1.64
CDC42BPA-212ENST00000478573 MYL4P12829 197 aa4.78□□□□□ -1.64
CDC42BPA-212ENST00000478573 LIPAP38571 399 aa4.78□□□□□ -1.64
CDC42BPA-212ENST00000478573 ARHGAP25P42331 645 aa4.78□□□□□ -1.64
CDC42BPA-212ENST00000478573 ZNF134P52741 427 aa4.78□□□□□ -1.64
CDC42BPA-212ENST00000478573 ICA1Q05084 483 aa4.78□□□□□ -1.64
CDC42BPA-212ENST00000478573 RAPGEF1Q13905 1077 aa4.78□□□□□ -1.64
CDC42BPA-212ENST00000478573 PDCD2Q16342 344 aaPredicted RBP4.78□□□□□ -1.64
CDC42BPA-212ENST00000478573 TUBB8Q3ZCM7 444 aa4.78□□□□□ -1.64
CDC42BPA-212ENST00000478573 AARS2Q5JTZ9 985 aaKnown RBP4.78□□□□□ -1.64
CDC42BPA-212ENST00000478573 LCE1AQ5T7P2 110 aa4.78□□□□□ -1.64
CDC42BPA-212ENST00000478573 ANO1Q5XXA6 986 aa4.78□□□□□ -1.64
CDC42BPA-212ENST00000478573 ICE2Q659A1 982 aa4.78□□□□□ -1.64
CDC42BPA-212ENST00000478573 PGBD2Q6P3X8 592 aa4.78□□□□□ -1.64
CDC42BPA-212ENST00000478573 ANKRD16Q6P6B7 361 aa4.78□□□□□ -1.64
CDC42BPA-212ENST00000478573 RNF44Q7L0R7 432 aa4.78□□□□□ -1.64
CDC42BPA-212ENST00000478573 MAVSQ7Z434 540 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms