RNA–Protein interactions for RNA: ENST00000478525.1

HPS3-205, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 3

Gene HPS3, Length 601 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-205ENST00000478525 PRTGQ2VWP7 1150 aa3.96□□□□□ -1.78
HPS3-205ENST00000478525 RNF187Q5TA31 235 aaPredicted RBP3.96□□□□□ -1.78
HPS3-205ENST00000478525 C12orf76Q8N812 135 aaPredicted RBP3.96□□□□□ -1.78
HPS3-205ENST00000478525 TRMT61AQ96FX7 289 aaKnown RBP3.96□□□□□ -1.78
HPS3-205ENST00000478525 NUP88Q99567 741 aaPredicted RBP3.96□□□□□ -1.78
HPS3-205ENST00000478525 TMEM204Q9BSN7 226 aa3.96□□□□□ -1.78
HPS3-205ENST00000478525 TM2D2Q9BX73 214 aa3.96□□□□□ -1.78
HPS3-205ENST00000478525 SLC12A5Q9H2X9 1139 aa3.96□□□□□ -1.78
HPS3-205ENST00000478525 ZMAT3Q9HA38 289 aaKnown RBP3.96□□□□□ -1.78
HPS3-205ENST00000478525 MLXIPLQ9NP71 852 aa3.96□□□□□ -1.78
HPS3-205ENST00000478525 TMEM45AQ9NWC5 275 aa3.96□□□□□ -1.78
HPS3-205ENST00000478525 A0A1W2PPL8 197 aa3.95□□□□□ -1.78
HPS3-205ENST00000478525 RRHO14718 337 aa3.95□□□□□ -1.78
HPS3-205ENST00000478525 CTIFO43310 598 aaKnown RBP3.95□□□□□ -1.78
HPS3-205ENST00000478525 RGS10O43665 173 aa3.95□□□□□ -1.78
HPS3-205ENST00000478525 EPN2O95208 641 aa3.95□□□□□ -1.78
HPS3-205ENST00000478525 SYF2O95926 243 aaKnown RBP3.95□□□□□ -1.78
HPS3-205ENST00000478525 PLAUP00749 431 aa3.95□□□□□ -1.78
HPS3-205ENST00000478525 HTR1BP28222 390 aa3.95□□□□□ -1.78
HPS3-205ENST00000478525 GPC5P78333 572 aa3.95□□□□□ -1.78
HPS3-205ENST00000478525 PFKFB3Q16875 520 aaPredicted RBP3.95□□□□□ -1.78
HPS3-205ENST00000478525 EARS2Q5JPH6 523 aaKnown RBP3.95□□□□□ -1.78
HPS3-205ENST00000478525 MANEAQ5SRI9 462 aa3.95□□□□□ -1.78
HPS3-205ENST00000478525 RFX8Q6ZV50 586 aa3.95□□□□□ -1.78
HPS3-205ENST00000478525 ZBTB46Q86UZ6 589 aa3.95□□□□□ -1.78
HPS3-205ENST00000478525 DENND1CQ8IV53 801 aa3.95□□□□□ -1.78
HPS3-205ENST00000478525 OR56A3Q8NH54 315 aa3.95□□□□□ -1.78
HPS3-205ENST00000478525 DIS3LQ8TF46 1054 aaKnown RBP3.95□□□□□ -1.78
HPS3-205ENST00000478525 PPP1R9BQ96SB3 815 aa3.95□□□□□ -1.78
HPS3-205ENST00000478525 XPNPEP3Q9NQH7 507 aa3.95□□□□□ -1.78
HPS3-205ENST00000478525 GABBR1Q9UBS5 961 aa3.95□□□□□ -1.78
HPS3-205ENST00000478525 RIMKLBQ9ULI2 386 aa3.95□□□□□ -1.78
HPS3-205ENST00000478525 SIRT4Q9Y6E7 314 aaPredicted RBP3.95□□□□□ -1.78
HPS3-205ENST00000478525 ZNF814B7Z6K7 855 aa3.94□□□□□ -1.78
HPS3-205ENST00000478525 H7C4K7 107 aa3.94□□□□□ -1.78
HPS3-205ENST00000478525 RRP9O43818 475 aaKnown RBP3.94□□□□□ -1.78
HPS3-205ENST00000478525 TBC1D4O60343 1298 aa3.94□□□□□ -1.78
HPS3-205ENST00000478525 PRAMEF2O60811 474 aa3.94□□□□□ -1.78
HPS3-205ENST00000478525 OFD1O75665 1012 aa3.94□□□□□ -1.78
HPS3-205ENST00000478525 NDUFB8O95169 186 aa3.94□□□□□ -1.78
HPS3-205ENST00000478525 NCLP19338 710 aaKnown RBP3.94□□□□□ -1.78
HPS3-205ENST00000478525 TNFRSF8P28908 595 aa3.94□□□□□ -1.78
HPS3-205ENST00000478525 INPP5JQ15735 1006 aaPredicted RBP3.94□□□□□ -1.78
HPS3-205ENST00000478525 ASIC2Q16515 512 aa3.94□□□□□ -1.78
HPS3-205ENST00000478525 ODF3L2Q3SX64 289 aa3.94□□□□□ -1.78
HPS3-205ENST00000478525 IFIT1BQ5T764 474 aaKnown RBP3.94□□□□□ -1.78
HPS3-205ENST00000478525 COL23A1Q86Y22 540 aaPredicted RBP3.94□□□□□ -1.78
HPS3-205ENST00000478525 RFX6Q8HWS3 928 aa3.94□□□□□ -1.78
HPS3-205ENST00000478525 CHPFQ8IZ52 775 aa3.94□□□□□ -1.78
HPS3-205ENST00000478525 METTL25Q8N6Q8 603 aa3.94□□□□□ -1.78
HPS3-205ENST00000478525 PNPLA1Q8N8W4 532 aa3.94□□□□□ -1.78
HPS3-205ENST00000478525 CHMP4CQ96CF2 233 aa3.94□□□□□ -1.78
HPS3-205ENST00000478525 USP29Q9HBJ7 922 aa3.94□□□□□ -1.78
HPS3-205ENST00000478525 TCF7L1Q9HCS4 588 aa3.94□□□□□ -1.78
HPS3-205ENST00000478525 MSRB1Q9NZV6 116 aa3.94□□□□□ -1.78
HPS3-205ENST00000478525 FZD4Q9ULV1 537 aa3.94□□□□□ -1.78
HPS3-205ENST00000478525 COG5Q9UP83 839 aa3.94□□□□□ -1.78
HPS3-205ENST00000478525 A8MVJ9 347 aa3.93□□□□□ -1.78
HPS3-205ENST00000478525 TLX3O43711 291 aaPredicted RBP3.93□□□□□ -1.78
HPS3-205ENST00000478525 UBXN7O94888 489 aa3.93□□□□□ -1.78
HPS3-205ENST00000478525 CD63P08962 238 aa3.93□□□□□ -1.78
HPS3-205ENST00000478525 PF4V1P10720 104 aa3.93□□□□□ -1.78
HPS3-205ENST00000478525 HOXB2P14652 356 aa3.93□□□□□ -1.78
HPS3-205ENST00000478525 VCAM1P19320 739 aa3.93□□□□□ -1.78
HPS3-205ENST00000478525 EN2P19622 333 aaPredicted RBP3.93□□□□□ -1.78
HPS3-205ENST00000478525 IL6STP40189 918 aaPredicted RBP3.93□□□□□ -1.78
HPS3-205ENST00000478525 PGDP52209 483 aa3.93□□□□□ -1.78
HPS3-205ENST00000478525 ITGA8P53708 1063 aa3.93□□□□□ -1.78
HPS3-205ENST00000478525 FHL3Q13643 280 aa3.93□□□□□ -1.78
HPS3-205ENST00000478525 INSCQ1MX18 579 aa3.93□□□□□ -1.78
HPS3-205ENST00000478525 FAM110CQ1W6H9 321 aa3.93□□□□□ -1.78
HPS3-205ENST00000478525 ZNF324BQ6AW86 544 aaPredicted RBP3.93□□□□□ -1.78
HPS3-205ENST00000478525 FAM57BQ71RH2 274 aa3.93□□□□□ -1.78
HPS3-205ENST00000478525 B4GALNT4Q76KP1 1039 aa3.93□□□□□ -1.78
HPS3-205ENST00000478525 TFAP2DQ7Z6R9 452 aa3.93□□□□□ -1.78
HPS3-205ENST00000478525 DAAM2Q86T65 1068 aa3.93□□□□□ -1.78
HPS3-205ENST00000478525 SPSB4Q96A44 273 aa3.93□□□□□ -1.78
HPS3-205ENST00000478525 FCRL5Q96RD9 977 aa3.93□□□□□ -1.78
HPS3-205ENST00000478525 ZNF518BQ9C0D4 1074 aa3.93□□□□□ -1.78
HPS3-205ENST00000478525 NUAK2Q9H093 628 aa3.93□□□□□ -1.78
HPS3-205ENST00000478525 PCDHA12Q9UN75 941 aa3.93□□□□□ -1.78
HPS3-205ENST00000478525 TMEM272A0A1B0GTI8 110 aa3.92□□□□□ -1.78
HPS3-205ENST00000478525 LOC102723971A0A1B0GUV8 181 aa3.92□□□□□ -1.78
HPS3-205ENST00000478525 SLC22A23A1A5C7 686 aa3.92□□□□□ -1.78
HPS3-205ENST00000478525 IFITM10A6NMD0 228 aa3.92□□□□□ -1.78
HPS3-205ENST00000478525 H3BML4 177 aa3.92□□□□□ -1.78
HPS3-205ENST00000478525 CCP110O43303 1012 aa3.92□□□□□ -1.78
HPS3-205ENST00000478525 PARP1P09874 1014 aaKnown RBP3.92□□□□□ -1.78
HPS3-205ENST00000478525 ADRA1DP25100 572 aa3.92□□□□□ -1.78
HPS3-205ENST00000478525 CDC25AP30304 524 aa3.92□□□□□ -1.78
HPS3-205ENST00000478525 ARRB2P32121 409 aa3.92□□□□□ -1.78
HPS3-205ENST00000478525 PTDSS1P48651 473 aaKnown RBP3.92□□□□□ -1.78
HPS3-205ENST00000478525 ALDH7A1P49419 539 aaKnown RBP3.92□□□□□ -1.78
HPS3-205ENST00000478525 GATMP50440 423 aa3.92□□□□□ -1.78
HPS3-205ENST00000478525 TXNL4AP83876 142 aaKnown RBP3.92□□□□□ -1.78
HPS3-205ENST00000478525 PPATQ06203 517 aa3.92□□□□□ -1.78
HPS3-205ENST00000478525 MICU3Q86XE3 530 aa3.92□□□□□ -1.78
HPS3-205ENST00000478525 C11orf44Q8N8P7 122 aa3.92□□□□□ -1.78
HPS3-205ENST00000478525 NGDNQ8NEJ9 315 aaKnown RBP3.92□□□□□ -1.78
HPS3-205ENST00000478525 PPP1R35Q8TAP8 253 aa3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms