RNA–Protein interactions for RNA: ENST00000478469.5

PCCB-214, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 1 (best) BASIC

Gene PCCB, Length 4,502 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-214ENST00000478469 C15orf59Q2T9L4 293 aaPredicted RBP12.47□□□□□ -0.41
PCCB-214ENST00000478469 CCDC149Q6ZUS6 474 aa12.47□□□□□ -0.41
PCCB-214ENST00000478469 SPPL2BQ8TCT7 592 aa12.47□□□□□ -0.41
PCCB-214ENST00000478469 C11orf49Q9H6J7 331 aa12.47□□□□□ -0.41
PCCB-214ENST00000478469 TMEM51Q9NW97 253 aa12.47□□□□□ -0.41
PCCB-214ENST00000478469 ZFATQ9P243 1243 aa12.47□□□□□ -0.41
PCCB-214ENST00000478469 MSRAQ9UJ68 235 aa12.47□□□□□ -0.41
PCCB-214ENST00000478469 ADAM28Q9UKQ2 775 aa12.47□□□□□ -0.41
PCCB-214ENST00000478469 A0A0U1RQF3 1178 aa12.47□□□□□ -0.41
PCCB-214ENST00000478469 MMP8P22894 467 aa12.47□□□□□ -0.41
PCCB-214ENST00000478469 ETFBP38117 255 aa12.47□□□□□ -0.41
PCCB-214ENST00000478469 DDX53Q86TM3 631 aaKnown RBP12.47□□□□□ -0.41
PCCB-214ENST00000478469 SRRM1Q8IYB3 904 aaKnown RBP12.47□□□□□ -0.41
PCCB-214ENST00000478469 TTYH3Q9C0H2 523 aa12.47□□□□□ -0.41
PCCB-214ENST00000478469 APOBEC3GQ9HC16 384 aaKnown RBP12.47□□□□□ -0.41
PCCB-214ENST00000478469 CNGB3Q9NQW8 809 aa12.47□□□□□ -0.41
PCCB-214ENST00000478469 ZC3H7BQ9UGR2 993 aaKnown RBP12.47□□□□□ -0.41
PCCB-214ENST00000478469 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.47□□□□□ -0.41
PCCB-214ENST00000478469 A0A1B0GUL6 1792 aa12.47□□□□□ -0.41
PCCB-214ENST00000478469 SCN9AQ15858 1988 aa12.47□□□□□ -0.41
PCCB-214ENST00000478469 S100BP04271 92 aaPredicted RBP12.47□□□□□ -0.41
PCCB-214ENST00000478469 CSH1P0DML2 217 aa12.47□□□□□ -0.41
PCCB-214ENST00000478469 CSH2P0DML3 217 aa12.47□□□□□ -0.41
PCCB-214ENST00000478469 CYBAP13498 195 aa12.47□□□□□ -0.41
PCCB-214ENST00000478469 ZNF143P52747 638 aaPredicted RBP12.47□□□□□ -0.41
PCCB-214ENST00000478469 TWF1Q12792 350 aa12.47□□□□□ -0.41
PCCB-214ENST00000478469 ASPHQ12797 758 aa12.47□□□□□ -0.41
PCCB-214ENST00000478469 MTA1Q13330 715 aa12.47□□□□□ -0.41
PCCB-214ENST00000478469 CCDC6Q16204 474 aa12.47□□□□□ -0.41
PCCB-214ENST00000478469 PCSK7Q16549 785 aa12.47□□□□□ -0.41
PCCB-214ENST00000478469 GKAP1Q5VSY0 366 aaPredicted RBP12.47□□□□□ -0.41
PCCB-214ENST00000478469 APTXQ7Z2E3 356 aaKnown RBP12.47□□□□□ -0.41
PCCB-214ENST00000478469 RAB44Q7Z6P3 723 aaPredicted RBP12.47□□□□□ -0.41
PCCB-214ENST00000478469 MCUQ8NE86 351 aa12.47□□□□□ -0.41
PCCB-214ENST00000478469 IPMKQ8NFU5 416 aa12.47□□□□□ -0.41
PCCB-214ENST00000478469 EXOC4Q96A65 974 aa12.47□□□□□ -0.41
PCCB-214ENST00000478469 FAXDC2Q96IV6 333 aa12.47□□□□□ -0.41
PCCB-214ENST00000478469 CYTH2Q99418 400 aa12.47□□□□□ -0.41
PCCB-214ENST00000478469 XPO1O14980 1071 aaKnown RBP12.47□□□□□ -0.41
PCCB-214ENST00000478469 RPL7AP62424 266 aaKnown RBP12.47□□□□□ -0.41
PCCB-214ENST00000478469 CREMQ03060 361 aa12.47□□□□□ -0.41
PCCB-214ENST00000478469 STAT4Q14765 748 aa12.47□□□□□ -0.41
PCCB-214ENST00000478469 NAPEPLDQ6IQ20 393 aa12.47□□□□□ -0.41
PCCB-214ENST00000478469 SDCCAG8Q86SQ7 713 aaPredicted RBP12.47□□□□□ -0.41
PCCB-214ENST00000478469 NUP93Q8N1F7 819 aa12.47□□□□□ -0.41
PCCB-214ENST00000478469 PAWRQ96IZ0 340 aaKnown RBP12.47□□□□□ -0.41
PCCB-214ENST00000478469 PCDHB18PQ96TA0 734 aa12.47□□□□□ -0.41
PCCB-214ENST00000478469 FRMD8Q9BZ67 464 aaPredicted RBP12.47□□□□□ -0.41
PCCB-214ENST00000478469 RNF39Q9H2S5 420 aa12.47□□□□□ -0.41
PCCB-214ENST00000478469 SLC27A5Q9Y2P5 690 aa12.47□□□□□ -0.41
PCCB-214ENST00000478469 MTM1Q13496 603 aa12.46□□□□□ -0.41
PCCB-214ENST00000478469 TSTA3Q13630 321 aaPredicted RBP12.46□□□□□ -0.41
PCCB-214ENST00000478469 TTC19Q6DKK2 380 aaPredicted RBP12.46□□□□□ -0.41
PCCB-214ENST00000478469 KLC3Q6P597 504 aa12.46□□□□□ -0.41
PCCB-214ENST00000478469 ZNF662Q6ZS27 426 aa12.46□□□□□ -0.41
PCCB-214ENST00000478469 TRMT10CQ7L0Y3 403 aaKnown RBP12.46□□□□□ -0.41
PCCB-214ENST00000478469 PPIL6Q8IXY8 311 aa12.46□□□□□ -0.41
PCCB-214ENST00000478469 CCDC33Q8N5R6 958 aa12.46□□□□□ -0.41
PCCB-214ENST00000478469 TMEM121Q9BTD3 319 aa12.46□□□□□ -0.41
PCCB-214ENST00000478469 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.46□□□□□ -0.41
PCCB-214ENST00000478469 PCDHB8Q9UN66 801 aa12.46□□□□□ -0.41
PCCB-214ENST00000478469 L1RE1Q9UN81 338 aa12.46□□□□□ -0.41
PCCB-214ENST00000478469 COPEO14579 308 aa12.46□□□□□ -0.41
PCCB-214ENST00000478469 NCAM2O15394 837 aa12.46□□□□□ -0.41
PCCB-214ENST00000478469 CLTBP09497 229 aa12.46□□□□□ -0.41
PCCB-214ENST00000478469 ATP5C1P36542 298 aaKnown RBP12.46□□□□□ -0.41
PCCB-214ENST00000478469 GGCXP38435 758 aa12.46□□□□□ -0.41
PCCB-214ENST00000478469 RAD23BP54727 409 aa12.46□□□□□ -0.41
PCCB-214ENST00000478469 SMAD1Q15797 465 aaKnown RBP12.46□□□□□ -0.41
PCCB-214ENST00000478469 PTPN20Q4JDL3 420 aa12.46□□□□□ -0.41
PCCB-214ENST00000478469 FAXCQ5TGI0 409 aa12.46□□□□□ -0.41
PCCB-214ENST00000478469 TTC30AQ86WT1 665 aa12.46□□□□□ -0.41
PCCB-214ENST00000478469 SCG3Q8WXD2 468 aaKnown RBP12.46□□□□□ -0.41
PCCB-214ENST00000478469 ZNF516Q92618 1163 aa12.46□□□□□ -0.41
PCCB-214ENST00000478469 A0A0U1RQJ8 604 aa12.46□□□□□ -0.42
PCCB-214ENST00000478469 BTNL10A8MVZ5 291 aa12.46□□□□□ -0.42
PCCB-214ENST00000478469 ANXA9O76027 345 aa12.46□□□□□ -0.42
PCCB-214ENST00000478469 RARAP10276 462 aa12.46□□□□□ -0.42
PCCB-214ENST00000478469 PSEN1P49768 467 aa12.46□□□□□ -0.42
PCCB-214ENST00000478469 SMARCB1Q12824 385 aa12.46□□□□□ -0.42
PCCB-214ENST00000478469 TIGD7Q6NT04 549 aaPredicted RBP12.46□□□□□ -0.42
PCCB-214ENST00000478469 SERINC5Q86VE9 423 aa12.46□□□□□ -0.42
PCCB-214ENST00000478469 HERC6Q8IVU3 1022 aa12.46□□□□□ -0.42
PCCB-214ENST00000478469 CACNA2D3Q8IZS8 1091 aa12.46□□□□□ -0.42
PCCB-214ENST00000478469 PPHLN1Q8NEY8 458 aaKnown RBP12.46□□□□□ -0.42
PCCB-214ENST00000478469 ZIC5Q96T25 663 aa12.46□□□□□ -0.42
PCCB-214ENST00000478469 TKTL2Q9H0I9 626 aa12.46□□□□□ -0.42
PCCB-214ENST00000478469 STXBP5LQ9Y2K9 1186 aa12.46□□□□□ -0.42
PCCB-214ENST00000478469 RBM47A0AV96 593 aaKnown RBP12.45□□□□□ -0.42
PCCB-214ENST00000478469 DNM1LO00429 736 aa12.45□□□□□ -0.42
PCCB-214ENST00000478469 PMPCBO75439 489 aa12.45□□□□□ -0.42
PCCB-214ENST00000478469 CKBP12277 381 aa12.45□□□□□ -0.42
PCCB-214ENST00000478469 GLUD2P49448 558 aa12.45□□□□□ -0.42
PCCB-214ENST00000478469 RPS6KA2Q15349 733 aa12.45□□□□□ -0.42
PCCB-214ENST00000478469 FUT10Q6P4F1 479 aa12.45□□□□□ -0.42
PCCB-214ENST00000478469 PDZD8Q8NEN9 1154 aa12.45□□□□□ -0.42
PCCB-214ENST00000478469 ARAP2Q8WZ64 1704 aa12.45□□□□□ -0.42
PCCB-214ENST00000478469 DMGDHQ9UI17 866 aaKnown RBP12.45□□□□□ -0.42
PCCB-214ENST00000478469 ANGPTL3Q9Y5C1 460 aa12.45□□□□□ -0.42
PCCB-214ENST00000478469 CDY1Q9Y6F8 540 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms