RNA–Protein interactions for RNA: ENST00000478219.1

COL13A1-207, Transcript of collagen type XIII alpha 1 chain, humanhuman

TSL 2

Gene COL13A1, Length 2,586 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-207ENST00000478219 OTOP1Q7RTM1 612 aa10.2□□□□□ -0.78
COL13A1-207ENST00000478219 PPIL6Q8IXY8 311 aa10.2□□□□□ -0.78
COL13A1-207ENST00000478219 SLC7A5P1Q8MH63 180 aa10.2□□□□□ -0.78
COL13A1-207ENST00000478219 CCDC33Q8N5R6 958 aa10.2□□□□□ -0.78
COL13A1-207ENST00000478219 RNF148Q8N7C7 305 aa10.2□□□□□ -0.78
COL13A1-207ENST00000478219 PPM1NQ8N819 430 aa10.2□□□□□ -0.78
COL13A1-207ENST00000478219 TSPAN14Q8NG11 270 aa10.2□□□□□ -0.78
COL13A1-207ENST00000478219 COX4I2Q96KJ9 171 aa10.2□□□□□ -0.78
COL13A1-207ENST00000478219 PKP2Q99959 881 aa10.2□□□□□ -0.78
COL13A1-207ENST00000478219 XAB2Q9HCS7 855 aaKnown RBP10.2□□□□□ -0.78
COL13A1-207ENST00000478219 TRNAU1APQ9NX07 287 aaKnown RBP10.2□□□□□ -0.78
COL13A1-207ENST00000478219 DNAJC16Q9Y2G8 782 aa10.2□□□□□ -0.78
COL13A1-207ENST00000478219 C7orf72A4D263 438 aa10.2□□□□□ -0.78
COL13A1-207ENST00000478219 TBX3O15119 743 aa10.2□□□□□ -0.78
COL13A1-207ENST00000478219 CBFA2T3O75081 653 aa10.2□□□□□ -0.78
COL13A1-207ENST00000478219 OXSR1O95747 527 aaPredicted RBP10.2□□□□□ -0.78
COL13A1-207ENST00000478219 WEE2P0C1S8 567 aa10.2□□□□□ -0.78
COL13A1-207ENST00000478219 EPHA3P29320 983 aa10.2□□□□□ -0.78
COL13A1-207ENST00000478219 YWHAGP61981 247 aaKnown RBP eCLIP10.2□□□□□ -0.78
COL13A1-207ENST00000478219 UBXN2AP68543 259 aa10.2□□□□□ -0.78
COL13A1-207ENST00000478219 CREB5Q02930 508 aa10.2□□□□□ -0.78
COL13A1-207ENST00000478219 TBCCQ15814 346 aa10.2□□□□□ -0.78
COL13A1-207ENST00000478219 NRF1Q16656 503 aa10.2□□□□□ -0.78
COL13A1-207ENST00000478219 RC3H1Q5TC82 1133 aaKnown RBP10.2□□□□□ -0.78
COL13A1-207ENST00000478219 DRICH1Q6PGQ1 229 aaPredicted RBP10.2□□□□□ -0.78
COL13A1-207ENST00000478219 TRIM72Q6ZMU5 477 aa10.2□□□□□ -0.78
COL13A1-207ENST00000478219 CCDC80Q76M96 950 aa10.2□□□□□ -0.78
COL13A1-207ENST00000478219 CTAGE3PQ8IX95 158 aa10.2□□□□□ -0.78
COL13A1-207ENST00000478219 XXYLT1Q8NBI6 393 aa10.2□□□□□ -0.78
COL13A1-207ENST00000478219 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.2□□□□□ -0.78
COL13A1-207ENST00000478219 RAB3IL1Q8TBN0 382 aa10.2□□□□□ -0.78
COL13A1-207ENST00000478219 DDI1Q8WTU0 396 aa10.2□□□□□ -0.78
COL13A1-207ENST00000478219 PAIP1Q9H074 479 aaKnown RBP10.2□□□□□ -0.78
COL13A1-207ENST00000478219 SMYD2Q9NRG4 433 aa10.2□□□□□ -0.78
COL13A1-207ENST00000478219 PNPOQ9NVS9 261 aa10.2□□□□□ -0.78
COL13A1-207ENST00000478219 DRG1Q9Y295 367 aaKnown RBP10.2□□□□□ -0.78
COL13A1-207ENST00000478219 SSX2IPQ9Y2D8 614 aa10.2□□□□□ -0.78
COL13A1-207ENST00000478219 FAM32AQ9Y421 112 aaKnown RBP10.2□□□□□ -0.78
COL13A1-207ENST00000478219 IKBKGQ9Y6K9 419 aa10.2□□□□□ -0.78
COL13A1-207ENST00000478219 AHDC1Q5TGY3 1603 aaPredicted RBP10.19□□□□□ -0.78
COL13A1-207ENST00000478219 hCG_1818297A0A087WSY0 165 aa10.19□□□□□ -0.78
COL13A1-207ENST00000478219 WDR46O15213 610 aaKnown RBP10.19□□□□□ -0.78
COL13A1-207ENST00000478219 NDUFB5O43674 189 aa10.19□□□□□ -0.78
COL13A1-207ENST00000478219 TOM1L1O75674 476 aa10.19□□□□□ -0.78
COL13A1-207ENST00000478219 GSRP00390 522 aa10.19□□□□□ -0.78
COL13A1-207ENST00000478219 ZNF23P17027 643 aa10.19□□□□□ -0.78
COL13A1-207ENST00000478219 CD247P20963 164 aa10.19□□□□□ -0.78
COL13A1-207ENST00000478219 NSFP46459 744 aaKnown RBP10.19□□□□□ -0.78
COL13A1-207ENST00000478219 ALDH3B2P48448 385 aa10.19□□□□□ -0.78
COL13A1-207ENST00000478219 OGDHQ02218 1023 aa10.19□□□□□ -0.78
COL13A1-207ENST00000478219 WASHC5Q12768 1159 aa10.19□□□□□ -0.78
COL13A1-207ENST00000478219 STX3Q13277 289 aa10.19□□□□□ -0.78
COL13A1-207ENST00000478219 ITPK1Q13572 414 aa10.19□□□□□ -0.78
COL13A1-207ENST00000478219 ATP1A4Q13733 1029 aa10.19□□□□□ -0.78
COL13A1-207ENST00000478219 ADGRE1Q14246 886 aa10.19□□□□□ -0.78
COL13A1-207ENST00000478219 C6orf183Q5T699 404 aa10.19□□□□□ -0.78
COL13A1-207ENST00000478219 ATG16L1Q676U5 607 aa10.19□□□□□ -0.78
COL13A1-207ENST00000478219 TMEM214Q6NUQ4 689 aaKnown RBP10.19□□□□□ -0.78
COL13A1-207ENST00000478219 C16orf46Q6P387 395 aa10.19□□□□□ -0.78
COL13A1-207ENST00000478219 MOXD1Q6UVY6 613 aa10.19□□□□□ -0.78
COL13A1-207ENST00000478219 XKR5Q6UX68 686 aa10.19□□□□□ -0.78
COL13A1-207ENST00000478219 TRMT1LQ7Z2T5 733 aaKnown RBP10.19□□□□□ -0.78
COL13A1-207ENST00000478219 NANOGNBQ7Z5D8 188 aa10.19□□□□□ -0.78
COL13A1-207ENST00000478219 CROCCP3Q8IVE0 287 aa10.19□□□□□ -0.78
COL13A1-207ENST00000478219 UNC45BQ8IWX7 931 aa10.19□□□□□ -0.78
COL13A1-207ENST00000478219 TRIML2Q8N7C3 387 aa10.19□□□□□ -0.78
COL13A1-207ENST00000478219 SLC35B2Q8TB61 432 aa10.19□□□□□ -0.78
COL13A1-207ENST00000478219 NKD2Q969F2 451 aaPredicted RBP10.19□□□□□ -0.78
COL13A1-207ENST00000478219 GFM2Q969S9 779 aaKnown RBP10.19□□□□□ -0.78
COL13A1-207ENST00000478219 FAM20AQ96MK3 541 aa10.19□□□□□ -0.78
COL13A1-207ENST00000478219 NLRP4Q96MN2 994 aa10.19□□□□□ -0.78
COL13A1-207ENST00000478219 IFT122Q9HBG6 1241 aa10.19□□□□□ -0.78
COL13A1-207ENST00000478219 PLAC1Q9HBJ0 212 aa10.19□□□□□ -0.78
COL13A1-207ENST00000478219 IGLV3-22A0A075B6J6 115 aa10.19□□□□□ -0.78
COL13A1-207ENST00000478219 HMX2A2RU54 273 aa10.19□□□□□ -0.78
COL13A1-207ENST00000478219 PLOD2O00469 737 aa10.19□□□□□ -0.78
COL13A1-207ENST00000478219 ZBTB14O43829 449 aa10.19□□□□□ -0.78
COL13A1-207ENST00000478219 ITGAVP06756 1048 aa10.19□□□□□ -0.78
COL13A1-207ENST00000478219 GABRB3P28472 473 aa10.19□□□□□ -0.78
COL13A1-207ENST00000478219 GMPRP36959 345 aa10.19□□□□□ -0.78
COL13A1-207ENST00000478219 BCAP31P51572 246 aa10.19□□□□□ -0.78
COL13A1-207ENST00000478219 MS4A2Q01362 244 aa10.19□□□□□ -0.78
COL13A1-207ENST00000478219 OTUD4Q01804 1114 aaKnown RBP10.19□□□□□ -0.78
COL13A1-207ENST00000478219 PDAP1Q13442 181 aaKnown RBP10.19□□□□□ -0.78
COL13A1-207ENST00000478219 BCL2A1Q16548 175 aa10.19□□□□□ -0.78
COL13A1-207ENST00000478219 MAP7D1Q3KQU3 841 aa10.19□□□□□ -0.78
COL13A1-207ENST00000478219 CENPSQ8N2Z9 138 aa10.19□□□□□ -0.78
COL13A1-207ENST00000478219 ACTL9Q8TC94 416 aa10.19□□□□□ -0.78
COL13A1-207ENST00000478219 MKL1Q969V6 931 aa10.19□□□□□ -0.78
COL13A1-207ENST00000478219 VTI1AQ96AJ9 217 aa10.19□□□□□ -0.78
COL13A1-207ENST00000478219 CFAP36Q96G28 342 aa10.19□□□□□ -0.78
COL13A1-207ENST00000478219 LRGUKQ96M69 825 aa10.19□□□□□ -0.78
COL13A1-207ENST00000478219 BIRC8Q96P09 236 aa10.19□□□□□ -0.78
COL13A1-207ENST00000478219 Q9H521 79 aa10.19□□□□□ -0.78
COL13A1-207ENST00000478219 ANLNQ9NQW6 1124 aa10.19□□□□□ -0.78
COL13A1-207ENST00000478219 MAN1C1Q9NR34 630 aa10.19□□□□□ -0.78
COL13A1-207ENST00000478219 RAB20Q9NX57 234 aa10.19□□□□□ -0.78
COL13A1-207ENST00000478219 C6orf203Q9P0P8 240 aaPredicted RBP10.19□□□□□ -0.78
COL13A1-207ENST00000478219 ITGA11Q9UKX5 1188 aa10.19□□□□□ -0.78
COL13A1-207ENST00000478219 CDC14AQ9UNH5 594 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms