RNA–Protein interactions for RNA: ENST00000477935.1

VPS50-214, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 760 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-214ENST00000477935 MLC1Q15049 377 aa5.65□□□□□ -1.5
VPS50-214ENST00000477935 PRR16Q569H4 304 aa5.65□□□□□ -1.5
VPS50-214ENST00000477935 FAM160B1Q5W0V3 765 aa5.65□□□□□ -1.5
VPS50-214ENST00000477935 NPNTQ6UXI9 565 aa5.65□□□□□ -1.5
VPS50-214ENST00000477935 TOR1AIP2Q8NFQ8 470 aa5.65□□□□□ -1.5
VPS50-214ENST00000477935 ACTRT2Q8TDY3 377 aa5.65□□□□□ -1.5
VPS50-214ENST00000477935 ZG16BQ96DA0 208 aa5.65□□□□□ -1.5
VPS50-214ENST00000477935 RBM17Q96I25 401 aaKnown RBP5.65□□□□□ -1.5
VPS50-214ENST00000477935 NT5C1BQ96P26 610 aa5.65□□□□□ -1.5
VPS50-214ENST00000477935 OSBPL9Q96SU4 736 aa5.65□□□□□ -1.5
VPS50-214ENST00000477935 HEPHQ9BQS7 1158 aa5.65□□□□□ -1.5
VPS50-214ENST00000477935 B3GNT5Q9BYG0 378 aa5.65□□□□□ -1.5
VPS50-214ENST00000477935 NYXQ9GZU5 481 aa5.65□□□□□ -1.5
VPS50-214ENST00000477935 CNNM1Q9NRU3 951 aa5.65□□□□□ -1.5
VPS50-214ENST00000477935 PIH1D1Q9NWS0 290 aaKnown RBP5.65□□□□□ -1.5
VPS50-214ENST00000477935 POLKQ9UBT6 870 aa5.65□□□□□ -1.5
VPS50-214ENST00000477935 MED16Q9Y2X0 877 aa5.65□□□□□ -1.5
VPS50-214ENST00000477935 UTP18Q9Y5J1 556 aaKnown RBP eCLIP5.65□□□□□ -1.5
VPS50-214ENST00000477935 RAD54BQ9Y620 910 aa5.65□□□□□ -1.5
VPS50-214ENST00000477935 SPTBN5Q9NRC6 3674 aaKnown RBP5.65□□□□□ -1.51
VPS50-214ENST00000477935 ANKRD31Q8N7Z5 1873 aa5.64□□□□□ -1.51
VPS50-214ENST00000477935 ZAR1LA6NP61 321 aa5.64□□□□□ -1.51
VPS50-214ENST00000477935 TRIAP1O43715 76 aa5.64□□□□□ -1.51
VPS50-214ENST00000477935 CAPN2P17655 700 aa5.64□□□□□ -1.51
VPS50-214ENST00000477935 CLK3P49761 638 aaKnown RBP5.64□□□□□ -1.51
VPS50-214ENST00000477935 ITIH3Q06033 890 aa5.64□□□□□ -1.51
VPS50-214ENST00000477935 DLK2Q6UY11 383 aa5.64□□□□□ -1.51
VPS50-214ENST00000477935 B3GALNT2Q8NCR0 500 aa5.64□□□□□ -1.51
VPS50-214ENST00000477935 SIMC1Q8NDZ2 872 aa5.64□□□□□ -1.51
VPS50-214ENST00000477935 CDCA5Q96FF9 252 aa5.64□□□□□ -1.51
VPS50-214ENST00000477935 FBXL20Q96IG2 436 aa5.64□□□□□ -1.51
VPS50-214ENST00000477935 PGBD1Q96JS3 809 aa5.64□□□□□ -1.51
VPS50-214ENST00000477935 MRGPRX1Q96LB2 322 aa5.64□□□□□ -1.51
VPS50-214ENST00000477935 RIOX1Q9H6W3 641 aa5.64□□□□□ -1.51
VPS50-214ENST00000477935 ZMAT3Q9HA38 289 aaKnown RBP5.64□□□□□ -1.51
VPS50-214ENST00000477935 ALG13Q9NP73 1137 aaKnown RBP5.64□□□□□ -1.51
VPS50-214ENST00000477935 MTMR10Q9NXD2 777 aa5.64□□□□□ -1.51
VPS50-214ENST00000477935 FOXJ2Q9P0K8 574 aa5.64□□□□□ -1.51
VPS50-214ENST00000477935 KLHL42Q9P2K6 505 aa5.64□□□□□ -1.51
VPS50-214ENST00000477935 HESX1Q9UBX0 185 aa5.64□□□□□ -1.51
VPS50-214ENST00000477935 ZNHIT2Q9UHR6 403 aa5.64□□□□□ -1.51
VPS50-214ENST00000477935 NIP7Q9Y221 180 aaKnown RBP eCLIP5.64□□□□□ -1.51
VPS50-214ENST00000477935 PLEKHM1Q9Y4G2 1056 aa5.64□□□□□ -1.51
VPS50-214ENST00000477935 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP5.64□□□□□ -1.51
VPS50-214ENST00000477935 HTTP42858 3142 aa5.64□□□□□ -1.51
VPS50-214ENST00000477935 ARFGEF2Q9Y6D5 1785 aa5.63□□□□□ -1.51
VPS50-214ENST00000477935 A0A1W2PPL8 197 aa5.63□□□□□ -1.51
VPS50-214ENST00000477935 MANSC4A6NHS7 340 aaPredicted RBP5.63□□□□□ -1.51
VPS50-214ENST00000477935 ADM5C9JUS6 153 aa5.63□□□□□ -1.51
VPS50-214ENST00000477935 MGST3O14880 152 aa5.63□□□□□ -1.51
VPS50-214ENST00000477935 DCLK1O15075 740 aa5.63□□□□□ -1.51
VPS50-214ENST00000477935 ERC2O15083 957 aa5.63□□□□□ -1.51
VPS50-214ENST00000477935 BBOX1O75936 387 aa5.63□□□□□ -1.51
VPS50-214ENST00000477935 NUDT3O95989 172 aa5.63□□□□□ -1.51
VPS50-214ENST00000477935 GRPP07492 148 aa5.63□□□□□ -1.51
VPS50-214ENST00000477935 GCLCP48506 637 aaPredicted RBP5.63□□□□□ -1.51
VPS50-214ENST00000477935 GPSM2P81274 684 aa5.63□□□□□ -1.51
VPS50-214ENST00000477935 LRIT3Q3SXY7 679 aa5.63□□□□□ -1.51
VPS50-214ENST00000477935 SLC9C1Q4G0N8 1177 aa5.63□□□□□ -1.51
VPS50-214ENST00000477935 RBM20Q5T481 1227 aaKnown RBP5.63□□□□□ -1.51
VPS50-214ENST00000477935 KAZNQ674X7 775 aa5.63□□□□□ -1.51
VPS50-214ENST00000477935 MYO1HQ8N1T3 1032 aa5.63□□□□□ -1.51
VPS50-214ENST00000477935 TFAP2BQ92481 460 aa5.63□□□□□ -1.51
VPS50-214ENST00000477935 TSR2Q969E8 191 aaKnown RBP5.63□□□□□ -1.51
VPS50-214ENST00000477935 PDLIM2Q96JY6 352 aa5.63□□□□□ -1.51
VPS50-214ENST00000477935 SLC46A1Q96NT5 459 aa5.63□□□□□ -1.51
VPS50-214ENST00000477935 P2RX7Q99572 595 aaKnown RBP5.63□□□□□ -1.51
VPS50-214ENST00000477935 TPSD1Q9BZJ3 242 aa5.63□□□□□ -1.51
VPS50-214ENST00000477935 TTYH3Q9C0H2 523 aa5.63□□□□□ -1.51
VPS50-214ENST00000477935 TMEM60Q9H2L4 133 aa5.63□□□□□ -1.51
VPS50-214ENST00000477935 C1orf112Q9NSG2 853 aa5.63□□□□□ -1.51
VPS50-214ENST00000477935 ATP6V0A2Q9Y487 856 aa5.63□□□□□ -1.51
VPS50-214ENST00000477935 TJP1Q07157 1748 aa5.62□□□□□ -1.51
VPS50-214ENST00000477935 BCORQ6W2J9 1755 aa5.62□□□□□ -1.51
VPS50-214ENST00000477935 FAM227AF5H4B4 570 aa5.62□□□□□ -1.51
VPS50-214ENST00000477935 RNMTO43148 476 aaKnown RBP5.62□□□□□ -1.51
VPS50-214ENST00000477935 PHGDHO43175 533 aaKnown RBP5.62□□□□□ -1.51
VPS50-214ENST00000477935 CHRM2P08172 466 aa5.62□□□□□ -1.51
VPS50-214ENST00000477935 NF2P35240 595 aa5.62□□□□□ -1.51
VPS50-214ENST00000477935 TNNT2P45379 298 aaPredicted RBP5.62□□□□□ -1.51
VPS50-214ENST00000477935 RARRES1P49788 294 aa5.62□□□□□ -1.51
VPS50-214ENST00000477935 ZNF134P52741 427 aa5.62□□□□□ -1.51
VPS50-214ENST00000477935 MAPK10P53779 464 aa5.62□□□□□ -1.51
VPS50-214ENST00000477935 NXPH1P58417 271 aa5.62□□□□□ -1.51
VPS50-214ENST00000477935 NANOS3P60323 173 aaKnown RBP5.62□□□□□ -1.51
VPS50-214ENST00000477935 SP3Q02447 781 aa5.62□□□□□ -1.51
VPS50-214ENST00000477935 PTPRRQ15256 657 aa5.62□□□□□ -1.51
VPS50-214ENST00000477935 LONRF3Q496Y0 759 aa5.62□□□□□ -1.51
VPS50-214ENST00000477935 ARHGAP29Q52LW3 1261 aa5.62□□□□□ -1.51
VPS50-214ENST00000477935 SWSAP1Q6NVH7 229 aa5.62□□□□□ -1.51
VPS50-214ENST00000477935 MAEAQ7L5Y9 396 aa5.62□□□□□ -1.51
VPS50-214ENST00000477935 FAM109AQ8N4B1 249 aa5.62□□□□□ -1.51
VPS50-214ENST00000477935 CAGE1Q8TC20 777 aa5.62□□□□□ -1.51
VPS50-214ENST00000477935 SPATA5L1Q9BVQ7 753 aa5.62□□□□□ -1.51
VPS50-214ENST00000477935 R3HDMLQ9H3Y0 253 aa5.62□□□□□ -1.51
VPS50-214ENST00000477935 PRDM13Q9H4Q3 707 aa5.62□□□□□ -1.51
VPS50-214ENST00000477935 ATP6V0A4Q9HBG4 840 aa5.62□□□□□ -1.51
VPS50-214ENST00000477935 TLK1Q9UKI8 766 aa5.62□□□□□ -1.51
VPS50-214ENST00000477935 COL4A5P29400 1685 aa5.62□□□□□ -1.51
VPS50-214ENST00000477935 PIEZO1Q92508 2521 aa5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms