RNA–Protein interactions for RNA: ENST00000477836.1

SMARCB1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 2

Gene SMARCB1, Length 660 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-206ENST00000477836 UTP20O75691 2785 aaKnown RBP10.35□□□□□ -0.75
SMARCB1-206ENST00000477836 DOPEY2Q9Y3R5 2298 aa10.35□□□□□ -0.75
SMARCB1-206ENST00000477836 CABIN1Q9Y6J0 2220 aa10.34□□□□□ -0.75
SMARCB1-206ENST00000477836 KPNA7A9QM74 516 aa10.34□□□□□ -0.75
SMARCB1-206ENST00000477836 SPTLC2O15270 562 aa10.34□□□□□ -0.75
SMARCB1-206ENST00000477836 HOXC11O43248 304 aaPredicted RBP10.34□□□□□ -0.75
SMARCB1-206ENST00000477836 LDOC1O95751 146 aaPredicted RBP10.34□□□□□ -0.75
SMARCB1-206ENST00000477836 ADRB2P07550 413 aa10.34□□□□□ -0.75
SMARCB1-206ENST00000477836 MAPTP10636 758 aaKnown RBP10.34□□□□□ -0.75
SMARCB1-206ENST00000477836 MBL2P11226 248 aaPredicted RBP10.34□□□□□ -0.75
SMARCB1-206ENST00000477836 CDK4P11802 303 aa10.34□□□□□ -0.75
SMARCB1-206ENST00000477836 MUTP22033 750 aa10.34□□□□□ -0.75
SMARCB1-206ENST00000477836 MCM7P33993 719 aa10.34□□□□□ -0.75
SMARCB1-206ENST00000477836 GRIK1P39086 918 aa10.34□□□□□ -0.75
SMARCB1-206ENST00000477836 PCBP4P57723 403 aaKnown RBP10.34□□□□□ -0.75
SMARCB1-206ENST00000477836 UBE2HP62256 183 aa10.34□□□□□ -0.75
SMARCB1-206ENST00000477836 NFATC3Q12968 1075 aa10.34□□□□□ -0.75
SMARCB1-206ENST00000477836 MAPK7Q13164 816 aa10.34□□□□□ -0.75
SMARCB1-206ENST00000477836 ORC2Q13416 577 aaPredicted RBP10.34□□□□□ -0.75
SMARCB1-206ENST00000477836 TEAD4Q15561 434 aa10.34□□□□□ -0.75
SMARCB1-206ENST00000477836 KYAT1Q16773 422 aa10.34□□□□□ -0.75
SMARCB1-206ENST00000477836 INTS6LQ5JSJ4 861 aaKnown RBP10.34□□□□□ -0.75
SMARCB1-206ENST00000477836 GRAMD4Q6IC98 578 aa10.34□□□□□ -0.75
SMARCB1-206ENST00000477836 METTL3Q86U44 580 aaKnown RBP10.34□□□□□ -0.75
SMARCB1-206ENST00000477836 CD302Q8IX05 232 aa10.34□□□□□ -0.75
SMARCB1-206ENST00000477836 LINC00301Q8NCQ3 95 aa10.34□□□□□ -0.75
SMARCB1-206ENST00000477836 TMEM161BQ8NDZ6 487 aa10.34□□□□□ -0.75
SMARCB1-206ENST00000477836 SCFD1Q8WVM8 642 aa10.34□□□□□ -0.75
SMARCB1-206ENST00000477836 CNDP2Q96KP4 475 aaKnown RBP10.34□□□□□ -0.75
SMARCB1-206ENST00000477836 ACBD6Q9BR61 282 aa10.34□□□□□ -0.75
SMARCB1-206ENST00000477836 C17orf75Q9HAS0 396 aa10.34□□□□□ -0.75
SMARCB1-206ENST00000477836 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.34□□□□□ -0.75
SMARCB1-206ENST00000477836 LMBRD1Q9NUN5 540 aa10.34□□□□□ -0.75
SMARCB1-206ENST00000477836 DDX43Q9NXZ2 648 aaKnown RBP10.34□□□□□ -0.75
SMARCB1-206ENST00000477836 RCOR1Q9UKL0 485 aa10.34□□□□□ -0.75
SMARCB1-206ENST00000477836 ZNF840PA6NDX5 716 aa10.33□□□□□ -0.76
SMARCB1-206ENST00000477836 PRRT4C9JH25 899 aa10.33□□□□□ -0.76
SMARCB1-206ENST00000477836 E9PMD0 336 aa10.33□□□□□ -0.76
SMARCB1-206ENST00000477836 OGTO15294 1046 aa10.33□□□□□ -0.76
SMARCB1-206ENST00000477836 FAM189A1O60320 539 aa10.33□□□□□ -0.76
SMARCB1-206ENST00000477836 PPP6R2O75170 966 aa10.33□□□□□ -0.76
SMARCB1-206ENST00000477836 OLFM2O95897 454 aa10.33□□□□□ -0.76
SMARCB1-206ENST00000477836 C1SP09871 688 aa10.33□□□□□ -0.76
SMARCB1-206ENST00000477836 GP1BBP13224 206 aa10.33□□□□□ -0.76
SMARCB1-206ENST00000477836 OXTRP30559 389 aa10.33□□□□□ -0.76
SMARCB1-206ENST00000477836 LIG4P49917 911 aa10.33□□□□□ -0.76
SMARCB1-206ENST00000477836 TPMTP51580 245 aa10.33□□□□□ -0.76
SMARCB1-206ENST00000477836 SMTNP53814 917 aa10.33□□□□□ -0.76
SMARCB1-206ENST00000477836 USP46P62068 366 aa10.33□□□□□ -0.76
SMARCB1-206ENST00000477836 SLC39A14Q15043 492 aa10.33□□□□□ -0.76
SMARCB1-206ENST00000477836 SKOR2Q2VWA4 1001 aaPredicted RBP10.33□□□□□ -0.76
SMARCB1-206ENST00000477836 FUT11Q495W5 492 aa10.33□□□□□ -0.76
SMARCB1-206ENST00000477836 SV2CQ496J9 727 aa10.33□□□□□ -0.76
SMARCB1-206ENST00000477836 CFAP221Q4G0U5 840 aa10.33□□□□□ -0.76
SMARCB1-206ENST00000477836 C6orf132Q5T0Z8 1188 aa10.33□□□□□ -0.76
SMARCB1-206ENST00000477836 KIAA1614Q5VZ46 1190 aa10.33□□□□□ -0.76
SMARCB1-206ENST00000477836 FBXL19Q6PCT2 694 aa10.33□□□□□ -0.76
SMARCB1-206ENST00000477836 LAYNQ6UX15 382 aa10.33□□□□□ -0.76
SMARCB1-206ENST00000477836 ZNF574Q6ZN55 896 aaPredicted RBP10.33□□□□□ -0.76
SMARCB1-206ENST00000477836 DENND5BQ6ZUT9 1274 aa10.33□□□□□ -0.76
SMARCB1-206ENST00000477836 DDX42Q86XP3 938 aaKnown RBP eCLIP10.33□□□□□ -0.76
SMARCB1-206ENST00000477836 TMEM25Q86YD3 366 aa10.33□□□□□ -0.76
SMARCB1-206ENST00000477836 GATAD2AQ86YP4 633 aa10.33□□□□□ -0.76
SMARCB1-206ENST00000477836 PDCL2Q8N4E4 241 aa10.33□□□□□ -0.76
SMARCB1-206ENST00000477836 NTPCRQ9BSD7 190 aaKnown RBP10.33□□□□□ -0.76
SMARCB1-206ENST00000477836 RUSC1Q9BVN2 902 aa10.33□□□□□ -0.76
SMARCB1-206ENST00000477836 CCSER1Q9C0I3 900 aa10.33□□□□□ -0.76
SMARCB1-206ENST00000477836 MKRN2Q9H000 416 aaKnown RBP10.33□□□□□ -0.76
SMARCB1-206ENST00000477836 SPHK2Q9NRA0 654 aa10.33□□□□□ -0.76
SMARCB1-206ENST00000477836 DNAJC17Q9NVM6 304 aaKnown RBP10.33□□□□□ -0.76
SMARCB1-206ENST00000477836 DPP3Q9NY33 737 aa10.33□□□□□ -0.76
SMARCB1-206ENST00000477836 DERAQ9Y315 318 aa10.33□□□□□ -0.76
SMARCB1-206ENST00000477836 MORC2Q9Y6X9 1032 aaPredicted RBP10.33□□□□□ -0.76
SMARCB1-206ENST00000477836 KNL1Q8NG31 2342 aa10.32□□□□□ -0.76
SMARCB1-206ENST00000477836 LAD1O00515 517 aa10.32□□□□□ -0.76
SMARCB1-206ENST00000477836 TERTO14746 1132 aaKnown RBP10.32□□□□□ -0.76
SMARCB1-206ENST00000477836 KLK10O43240 276 aa10.32□□□□□ -0.76
SMARCB1-206ENST00000477836 OAS1P00973 400 aaKnown RBP10.32□□□□□ -0.76
SMARCB1-206ENST00000477836 GLDCP23378 1020 aa10.32□□□□□ -0.76
SMARCB1-206ENST00000477836 ACADVLP49748 655 aa10.32□□□□□ -0.76
SMARCB1-206ENST00000477836 MYL7Q01449 175 aa10.32□□□□□ -0.76
SMARCB1-206ENST00000477836 VAC14Q08AM6 782 aa10.32□□□□□ -0.76
SMARCB1-206ENST00000477836 RAD51AP2Q09MP3 1159 aa10.32□□□□□ -0.76
SMARCB1-206ENST00000477836 STARD3Q14849 445 aa10.32□□□□□ -0.76
SMARCB1-206ENST00000477836 ZNF174Q15697 407 aa10.32□□□□□ -0.76
SMARCB1-206ENST00000477836 KCNT1Q5JUK3 1230 aa10.32□□□□□ -0.76
SMARCB1-206ENST00000477836 RINT1Q6NUQ1 792 aa10.32□□□□□ -0.76
SMARCB1-206ENST00000477836 FAM124AQ86V42 546 aa10.32□□□□□ -0.76
SMARCB1-206ENST00000477836 CACUL1Q86Y37 369 aa10.32□□□□□ -0.76
SMARCB1-206ENST00000477836 DHX40Q8IX18 779 aaKnown RBP10.32□□□□□ -0.76
SMARCB1-206ENST00000477836 OTUB2Q96DC9 234 aa10.32□□□□□ -0.76
SMARCB1-206ENST00000477836 FUBP3Q96I24 572 aaKnown RBP eCLIP10.32□□□□□ -0.76
SMARCB1-206ENST00000477836 SPATA17Q96L03 361 aa10.32□□□□□ -0.76
SMARCB1-206ENST00000477836 PKMYT1Q99640 499 aa10.32□□□□□ -0.76
SMARCB1-206ENST00000477836 MSTO1Q9BUK6 570 aa10.32□□□□□ -0.76
SMARCB1-206ENST00000477836 NUP58Q9BVL2 599 aa10.32□□□□□ -0.76
SMARCB1-206ENST00000477836 TM9SF3Q9HD45 589 aa10.32□□□□□ -0.76
SMARCB1-206ENST00000477836 CPSF3Q9UKF6 684 aaKnown RBP10.32□□□□□ -0.76
SMARCB1-206ENST00000477836 L1RE1Q9UN81 338 aa10.32□□□□□ -0.76
SMARCB1-206ENST00000477836 DNM3Q9UQ16 869 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms