RNA–Protein interactions for RNA: ENST00000477739.1

CMC1-209, Transcript of C-X9-C motif containing 1, humanhuman

TSL 1 (best)

Gene CMC1, Length 3,749 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMC1-209ENST00000477739 E2F7Q96AV8 911 aa10.14□□□□□ -0.79
CMC1-209ENST00000477739 L3MBTL3Q96JM7 780 aaPredicted RBP10.14□□□□□ -0.79
CMC1-209ENST00000477739 FBXL18Q96ME1 805 aa10.14□□□□□ -0.79
CMC1-209ENST00000477739 DNAJC16Q9Y2G8 782 aa10.14□□□□□ -0.79
CMC1-209ENST00000477739 CLUHO75153 1309 aa10.14□□□□□ -0.79
CMC1-209ENST00000477739 A0A1B0GVG6 124 aa10.14□□□□□ -0.79
CMC1-209ENST00000477739 A6NJR5 290 aa10.14□□□□□ -0.79
CMC1-209ENST00000477739 GOLGA8CPA6NN73 597 aa10.14□□□□□ -0.79
CMC1-209ENST00000477739 KRT37O76014 449 aa10.14□□□□□ -0.79
CMC1-209ENST00000477739 CACNA2D1P54289 1103 aa10.14□□□□□ -0.79
CMC1-209ENST00000477739 NME5P56597 212 aa10.14□□□□□ -0.79
CMC1-209ENST00000477739 CENPCQ03188 943 aa10.14□□□□□ -0.79
CMC1-209ENST00000477739 CAPSQ13938 189 aa10.14□□□□□ -0.79
CMC1-209ENST00000477739 PDK4Q16654 411 aa10.14□□□□□ -0.79
CMC1-209ENST00000477739 PAN2Q504Q3 1202 aaKnown RBP10.14□□□□□ -0.79
CMC1-209ENST00000477739 FAM219BQ5XKK7 198 aa10.14□□□□□ -0.79
CMC1-209ENST00000477739 MFSD5Q6N075 450 aa10.14□□□□□ -0.79
CMC1-209ENST00000477739 IYDQ6PHW0 289 aa10.14□□□□□ -0.79
CMC1-209ENST00000477739 ALLCQ8N6M5 410 aa10.14□□□□□ -0.79
CMC1-209ENST00000477739 FBXO41Q8TF61 875 aa10.14□□□□□ -0.79
CMC1-209ENST00000477739 NIF3L1Q9GZT8 377 aa10.14□□□□□ -0.79
CMC1-209ENST00000477739 SLC5A4Q9NY91 659 aa10.14□□□□□ -0.79
CMC1-209ENST00000477739 SMG5Q9UPR3 1016 aaKnown RBP10.14□□□□□ -0.79
CMC1-209ENST00000477739 PSTPIP1O43586 416 aa10.14□□□□□ -0.79
CMC1-209ENST00000477739 PROCP04070 461 aa10.14□□□□□ -0.79
CMC1-209ENST00000477739 C6orf222P0C671 652 aaPredicted RBP10.14□□□□□ -0.79
CMC1-209ENST00000477739 ENO3P13929 434 aaPredicted RBP10.14□□□□□ -0.79
CMC1-209ENST00000477739 PTPN4P29074 926 aa10.14□□□□□ -0.79
CMC1-209ENST00000477739 TYK2P29597 1187 aa10.14□□□□□ -0.79
CMC1-209ENST00000477739 CXCR3P49682 368 aa10.14□□□□□ -0.79
CMC1-209ENST00000477739 OAZ1P54368 228 aa10.14□□□□□ -0.79
CMC1-209ENST00000477739 CACNB2Q08289 660 aaPredicted RBP10.14□□□□□ -0.79
CMC1-209ENST00000477739 ASPHQ12797 758 aa10.14□□□□□ -0.79
CMC1-209ENST00000477739 HSDL1Q3SXM5 330 aa10.14□□□□□ -0.79
CMC1-209ENST00000477739 SLC30A9Q6PML9 568 aa10.14□□□□□ -0.79
CMC1-209ENST00000477739 TRIM72Q6ZMU5 477 aa10.14□□□□□ -0.79
CMC1-209ENST00000477739 KIAA0319LQ8IZA0 1049 aa10.14□□□□□ -0.79
CMC1-209ENST00000477739 C3orf20Q8ND61 904 aa10.14□□□□□ -0.79
CMC1-209ENST00000477739 RAB3IL1Q8TBN0 382 aa10.14□□□□□ -0.79
CMC1-209ENST00000477739 ERLEC1Q96DZ1 483 aa10.14□□□□□ -0.79
CMC1-209ENST00000477739 KLRG1Q96E93 195 aa10.14□□□□□ -0.79
CMC1-209ENST00000477739 FGD4Q96M96 766 aa10.14□□□□□ -0.79
CMC1-209ENST00000477739 SPATA33Q96N06 139 aa10.14□□□□□ -0.79
CMC1-209ENST00000477739 CGRRF1Q99675 332 aa10.14□□□□□ -0.79
CMC1-209ENST00000477739 CAB39LQ9H9S4 337 aa10.14□□□□□ -0.79
CMC1-209ENST00000477739 ELP3Q9H9T3 547 aa10.14□□□□□ -0.79
CMC1-209ENST00000477739 NDE1Q9NXR1 346 aa10.14□□□□□ -0.79
CMC1-209ENST00000477739 APPL1Q9UKG1 709 aa10.14□□□□□ -0.79
CMC1-209ENST00000477739 LAMA2P24043 3122 aaKnown RBP10.13□□□□□ -0.79
CMC1-209ENST00000477739 WDR27A2RRH5 827 aa10.13□□□□□ -0.79
CMC1-209ENST00000477739 LUC7L3O95232 432 aaKnown RBP10.13□□□□□ -0.79
CMC1-209ENST00000477739 C4BPAP04003 597 aaKnown RBP10.13□□□□□ -0.79
CMC1-209ENST00000477739 ERBB2P04626 1255 aa10.13□□□□□ -0.79
CMC1-209ENST00000477739 ERVK-10P10266 1014 aa10.13□□□□□ -0.79
CMC1-209ENST00000477739 PKNOX1P55347 436 aa10.13□□□□□ -0.79
CMC1-209ENST00000477739 ZNF252P-AS1Q0IIN9 211 aa10.13□□□□□ -0.79
CMC1-209ENST00000477739 TREML2Q5T2D2 321 aa10.13□□□□□ -0.79
CMC1-209ENST00000477739 ANO7Q6IWH7 933 aa10.13□□□□□ -0.79
CMC1-209ENST00000477739 LRRC74BQ6ZQY2 392 aa10.13□□□□□ -0.79
CMC1-209ENST00000477739 PYROXD2Q8N2H3 581 aa10.13□□□□□ -0.79
CMC1-209ENST00000477739 RYBPQ8N488 228 aaPredicted RBP10.13□□□□□ -0.79
CMC1-209ENST00000477739 GSDMBQ8TAX9 411 aa10.13□□□□□ -0.79
CMC1-209ENST00000477739 ZSCAN18Q8TBC5 510 aaPredicted RBP10.13□□□□□ -0.79
CMC1-209ENST00000477739 FAXDC2Q96IV6 333 aa10.13□□□□□ -0.79
CMC1-209ENST00000477739 TTC25Q96NG3 672 aa10.13□□□□□ -0.79
CMC1-209ENST00000477739 LGMNQ99538 433 aa10.13□□□□□ -0.79
CMC1-209ENST00000477739 ATXN3LQ9H3M9 355 aa10.13□□□□□ -0.79
CMC1-209ENST00000477739 V9GYQ6 96 aa10.13□□□□□ -0.79
CMC1-209ENST00000477739 DCXO43602 365 aa10.13□□□□□ -0.79
CMC1-209ENST00000477739 TPST1O60507 370 aa10.13□□□□□ -0.79
CMC1-209ENST00000477739 OSBPP22059 807 aa10.13□□□□□ -0.79
CMC1-209ENST00000477739 FGFR3P22607 806 aa10.13□□□□□ -0.79
CMC1-209ENST00000477739 ACAT1P24752 427 aaKnown RBP10.13□□□□□ -0.79
CMC1-209ENST00000477739 ITGA9Q13797 1035 aa10.13□□□□□ -0.79
CMC1-209ENST00000477739 KCTD2Q14681 263 aa10.13□□□□□ -0.79
CMC1-209ENST00000477739 ACAP1Q15027 740 aa10.13□□□□□ -0.79
CMC1-209ENST00000477739 CA9Q16790 459 aa10.13□□□□□ -0.79
CMC1-209ENST00000477739 KLHL38Q2WGJ6 581 aa10.13□□□□□ -0.79
CMC1-209ENST00000477739 HABP4Q5JVS0 413 aaKnown RBP10.13□□□□□ -0.79
CMC1-209ENST00000477739 FAM156AQ8NDB6 213 aa10.13□□□□□ -0.79
CMC1-209ENST00000477739 RBM15BQ8NDT2 890 aaKnown RBP10.13□□□□□ -0.79
CMC1-209ENST00000477739 CLEC4CQ8WTT0 213 aa10.13□□□□□ -0.79
CMC1-209ENST00000477739 FAM172AQ8WUF8 416 aa10.13□□□□□ -0.79
CMC1-209ENST00000477739 TMA16Q96EY4 203 aaKnown RBP10.13□□□□□ -0.79
CMC1-209ENST00000477739 KIF12Q96FN5 646 aa10.13□□□□□ -0.79
CMC1-209ENST00000477739 OXNAD1Q96HP4 312 aaPredicted RBP10.13□□□□□ -0.79
CMC1-209ENST00000477739 SIK2Q9H0K1 926 aa10.13□□□□□ -0.79
CMC1-209ENST00000477739 PAPOLBQ9NRJ5 636 aaKnown RBP10.13□□□□□ -0.79
CMC1-209ENST00000477739 DDX18Q9NVP1 670 aaKnown RBP10.13□□□□□ -0.79
CMC1-209ENST00000477739 TAS2R1Q9NYW7 299 aa10.13□□□□□ -0.79
CMC1-209ENST00000477739 PMM2O15305 246 aa10.12□□□□□ -0.79
CMC1-209ENST00000477739 MTA2O94776 668 aa10.12□□□□□ -0.79
CMC1-209ENST00000477739 ZNF286BP0CG31 522 aa10.12□□□□□ -0.79
CMC1-209ENST00000477739 TFE3P19532 575 aaPredicted RBP10.12□□□□□ -0.79
CMC1-209ENST00000477739 KDELR1P24390 212 aa10.12□□□□□ -0.79
CMC1-209ENST00000477739 GBE1Q04446 702 aa10.12□□□□□ -0.79
CMC1-209ENST00000477739 STX3Q13277 289 aa10.12□□□□□ -0.79
CMC1-209ENST00000477739 DPYSL3Q14195 570 aa10.12□□□□□ -0.79
CMC1-209ENST00000477739 CHST13Q8NET6 341 aa10.12□□□□□ -0.79
CMC1-209ENST00000477739 CEP70Q8NHQ1 597 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms