RNA–Protein interactions for RNA: ENST00000477485.1

RTFDC1-206, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 464 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-206ENST00000477485 B3GALNT2Q8NCR0 500 aa7.08□□□□□ -1.28
RTFDC1-206ENST00000477485 SCAMP5Q8TAC9 235 aa7.08□□□□□ -1.28
RTFDC1-206ENST00000477485 IPO4Q8TEX9 1081 aaKnown RBP7.08□□□□□ -1.28
RTFDC1-206ENST00000477485 SNX19Q92543 992 aa7.08□□□□□ -1.28
RTFDC1-206ENST00000477485 DNAJC19Q96DA6 116 aa7.08□□□□□ -1.28
RTFDC1-206ENST00000477485 OTUB2Q96DC9 234 aa7.08□□□□□ -1.28
RTFDC1-206ENST00000477485 LRIG1Q96JA1 1093 aa7.08□□□□□ -1.28
RTFDC1-206ENST00000477485 CEP295NLQ96MC4 621 aa7.08□□□□□ -1.28
RTFDC1-206ENST00000477485 KCNK16Q96T55 309 aa7.08□□□□□ -1.28
RTFDC1-206ENST00000477485 ACOX2Q99424 681 aa7.08□□□□□ -1.28
RTFDC1-206ENST00000477485 STRA6Q9BX79 667 aa7.08□□□□□ -1.28
RTFDC1-206ENST00000477485 BBS2Q9BXC9 721 aa7.08□□□□□ -1.28
RTFDC1-206ENST00000477485 B3GNT5Q9BYG0 378 aa7.08□□□□□ -1.28
RTFDC1-206ENST00000477485 FAM124BQ9H5Z6 455 aaPredicted RBP7.08□□□□□ -1.28
RTFDC1-206ENST00000477485 CAPN10Q9HC96 672 aa7.08□□□□□ -1.28
RTFDC1-206ENST00000477485 DMAP1Q9NPF5 467 aaPredicted RBP7.08□□□□□ -1.28
RTFDC1-206ENST00000477485 KRT82Q9NSB4 513 aa7.08□□□□□ -1.28
RTFDC1-206ENST00000477485 CACNA2D2Q9NY47 1150 aa7.08□□□□□ -1.28
RTFDC1-206ENST00000477485 GMIPQ9P107 970 aa7.08□□□□□ -1.28
RTFDC1-206ENST00000477485 SUSD2Q9UGT4 822 aa7.08□□□□□ -1.28
RTFDC1-206ENST00000477485 APOBEC2Q9Y235 224 aaKnown RBP7.08□□□□□ -1.28
RTFDC1-206ENST00000477485 NME7Q9Y5B8 376 aa7.08□□□□□ -1.28
RTFDC1-206ENST00000477485 FASNP49327 2511 aaKnown RBP7.07□□□□□ -1.28
RTFDC1-206ENST00000477485 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP7.07□□□□□ -1.28
RTFDC1-206ENST00000477485 A0A1W2PQF6 199 aa7.07□□□□□ -1.28
RTFDC1-206ENST00000477485 UPK3BL1B0FP48 263 aa7.07□□□□□ -1.28
RTFDC1-206ENST00000477485 UPK3BL2E5RIL1 263 aa7.07□□□□□ -1.28
RTFDC1-206ENST00000477485 HOXC11O43248 304 aaPredicted RBP7.07□□□□□ -1.28
RTFDC1-206ENST00000477485 TACC1O75410 805 aa7.07□□□□□ -1.28
RTFDC1-206ENST00000477485 AP1G2O75843 785 aa7.07□□□□□ -1.28
RTFDC1-206ENST00000477485 CD2BP2O95400 341 aaKnown RBP7.07□□□□□ -1.28
RTFDC1-206ENST00000477485 CST3P01034 146 aaPredicted RBP7.07□□□□□ -1.28
RTFDC1-206ENST00000477485 NCAM1P13591 858 aa7.07□□□□□ -1.28
RTFDC1-206ENST00000477485 CCDC130P13994 396 aa7.07□□□□□ -1.28
RTFDC1-206ENST00000477485 TYRP14679 529 aa7.07□□□□□ -1.28
RTFDC1-206ENST00000477485 MYL6P60660 151 aa7.07□□□□□ -1.28
RTFDC1-206ENST00000477485 ASIC1P78348 528 aa7.07□□□□□ -1.28
RTFDC1-206ENST00000477485 ORC1Q13415 861 aa7.07□□□□□ -1.28
RTFDC1-206ENST00000477485 STARD3Q14849 445 aa7.07□□□□□ -1.28
RTFDC1-206ENST00000477485 SNRNP35Q16560 246 aaKnown RBP7.07□□□□□ -1.28
RTFDC1-206ENST00000477485 TOGARAM2Q6ZUX3 1019 aa7.07□□□□□ -1.28
RTFDC1-206ENST00000477485 NELFCDQ8IXH7 590 aa7.07□□□□□ -1.28
RTFDC1-206ENST00000477485 ETFBKMTQ8IXQ9 262 aa7.07□□□□□ -1.28
RTFDC1-206ENST00000477485 PHTF2Q8N3S3 785 aa7.07□□□□□ -1.28
RTFDC1-206ENST00000477485 GLIS3Q8NEA6 775 aa7.07□□□□□ -1.28
RTFDC1-206ENST00000477485 KCNV2Q8TDN2 545 aa7.07□□□□□ -1.28
RTFDC1-206ENST00000477485 FOXJ1Q92949 421 aa7.07□□□□□ -1.28
RTFDC1-206ENST00000477485 WBP2Q969T9 261 aa7.07□□□□□ -1.28
RTFDC1-206ENST00000477485 ELMO3Q96BJ8 720 aa7.07□□□□□ -1.28
RTFDC1-206ENST00000477485 SMARCD1Q96GM5 515 aa7.07□□□□□ -1.28
RTFDC1-206ENST00000477485 CGRRF1Q99675 332 aa7.07□□□□□ -1.28
RTFDC1-206ENST00000477485 GPR174Q9BXC1 333 aa7.07□□□□□ -1.28
RTFDC1-206ENST00000477485 SMYD3Q9H7B4 428 aa7.07□□□□□ -1.28
RTFDC1-206ENST00000477485 UPF2Q9HAU5 1272 aaKnown RBP7.07□□□□□ -1.28
RTFDC1-206ENST00000477485 PRDM16Q9HAZ2 1276 aa7.07□□□□□ -1.28
RTFDC1-206ENST00000477485 KIAA1586Q9HCI6 787 aa7.07□□□□□ -1.28
RTFDC1-206ENST00000477485 TMEM30AQ9NV96 361 aa7.07□□□□□ -1.28
RTFDC1-206ENST00000477485 DNAAF2Q9NVR5 837 aaKnown RBP7.07□□□□□ -1.28
RTFDC1-206ENST00000477485 PLK2Q9NYY3 685 aa7.07□□□□□ -1.28
RTFDC1-206ENST00000477485 FBXO2Q9UK22 296 aaPredicted RBP7.07□□□□□ -1.28
RTFDC1-206ENST00000477485 RAXQ9Y2V3 346 aa7.07□□□□□ -1.28
RTFDC1-206ENST00000477485 GPSM3Q9Y4H4 160 aa7.07□□□□□ -1.28
RTFDC1-206ENST00000477485 PLXNA2O75051 1894 aa7.07□□□□□ -1.28
RTFDC1-206ENST00000477485 NYNRINQ9P2P1 1898 aaKnown RBP7.07□□□□□ -1.28
RTFDC1-206ENST00000477485 CKAP5Q14008 2032 aa7.06□□□□□ -1.28
RTFDC1-206ENST00000477485 GCN1Q92616 2671 aaKnown RBP7.06□□□□□ -1.28
RTFDC1-206ENST00000477485 A0A0A0MRY4 1105 aa7.06□□□□□ -1.28
RTFDC1-206ENST00000477485 WASH3PC4AMC7 463 aa7.06□□□□□ -1.28
RTFDC1-206ENST00000477485 PRRT4C9JH25 899 aa7.06□□□□□ -1.28
RTFDC1-206ENST00000477485 SYNCRIPO60506 623 aaKnown RBP7.06□□□□□ -1.28
RTFDC1-206ENST00000477485 TLR5O60602 858 aa7.06□□□□□ -1.28
RTFDC1-206ENST00000477485 KIF20AO95235 890 aa7.06□□□□□ -1.28
RTFDC1-206ENST00000477485 ZIC2O95409 532 aaPredicted RBP7.06□□□□□ -1.28
RTFDC1-206ENST00000477485 CER1O95813 267 aa7.06□□□□□ -1.28
RTFDC1-206ENST00000477485 HMBSP08397 361 aa7.06□□□□□ -1.28
RTFDC1-206ENST00000477485 ACADMP11310 421 aa7.06□□□□□ -1.28
RTFDC1-206ENST00000477485 TRIM21P19474 475 aaKnown RBP7.06□□□□□ -1.28
RTFDC1-206ENST00000477485 ADORA2BP29275 332 aa7.06□□□□□ -1.28
RTFDC1-206ENST00000477485 CD6P30203 668 aa7.06□□□□□ -1.28
RTFDC1-206ENST00000477485 DGKGP49619 791 aa7.06□□□□□ -1.28
RTFDC1-206ENST00000477485 CDH8P55286 799 aa7.06□□□□□ -1.28
RTFDC1-206ENST00000477485 MAP3K7CLP57077 242 aa7.06□□□□□ -1.28
RTFDC1-206ENST00000477485 ARID5AQ03989 594 aa7.06□□□□□ -1.28
RTFDC1-206ENST00000477485 SLC14A1Q13336 389 aa7.06□□□□□ -1.28
RTFDC1-206ENST00000477485 ZNF699Q32M78 642 aa7.06□□□□□ -1.28
RTFDC1-206ENST00000477485 ZNF667Q5HYK9 610 aa7.06□□□□□ -1.28
RTFDC1-206ENST00000477485 FAM173BQ6P4H8 233 aa7.06□□□□□ -1.28
RTFDC1-206ENST00000477485 LIMS2Q7Z4I7 341 aa7.06□□□□□ -1.28
RTFDC1-206ENST00000477485 ACOT1Q86TX2 421 aa7.06□□□□□ -1.28
RTFDC1-206ENST00000477485 FAM124AQ86V42 546 aa7.06□□□□□ -1.28
RTFDC1-206ENST00000477485 KIAA1958Q8N8K9 716 aa7.06□□□□□ -1.28
RTFDC1-206ENST00000477485 XXYLT1Q8NBI6 393 aa7.06□□□□□ -1.28
RTFDC1-206ENST00000477485 ADAMTS14Q8WXS8 1223 aa7.06□□□□□ -1.28
RTFDC1-206ENST00000477485 OVCA2Q8WZ82 227 aa7.06□□□□□ -1.28
RTFDC1-206ENST00000477485 SYAP1Q96A49 352 aaPredicted RBP7.06□□□□□ -1.28
RTFDC1-206ENST00000477485 TOE1Q96GM8 510 aaKnown RBP7.06□□□□□ -1.28
RTFDC1-206ENST00000477485 TNIP3Q96KP6 325 aa7.06□□□□□ -1.28
RTFDC1-206ENST00000477485 ZFRQ96KR1 1074 aaKnown RBP7.06□□□□□ -1.28
RTFDC1-206ENST00000477485 MRGPRX1Q96LB2 322 aa7.06□□□□□ -1.28
RTFDC1-206ENST00000477485 DCBLD2Q96PD2 775 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms