RNA–Protein interactions for RNA: ENST00000477392.1

LINC00996-201, long intergenic non-protein coding RNA 996, humanhuman

TSL 1 (best) BASIC

Gene LINC00996, Length 2,043 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00996-201ENST00000477392 TRPV1Q8NER1 839 aa16.32■□□□□ 0.2
LINC00996-201ENST00000477392 HSFY1Q96LI6 401 aa16.32■□□□□ 0.2
LINC00996-201ENST00000477392 MAGEB5Q9BZ81 275 aa16.32■□□□□ 0.2
LINC00996-201ENST00000477392 TRABDQ9H4I3 376 aa16.32■□□□□ 0.2
LINC00996-201ENST00000477392 ACSS3Q9H6R3 686 aa16.32■□□□□ 0.2
LINC00996-201ENST00000477392 NRDE2Q9H7Z3 1164 aa16.32■□□□□ 0.2
LINC00996-201ENST00000477392 NKIRAS1Q9NYS0 192 aa16.32■□□□□ 0.2
LINC00996-201ENST00000477392 FETUBQ9UGM5 382 aa16.32■□□□□ 0.2
LINC00996-201ENST00000477392 HEY1Q9Y5J3 304 aa16.32■□□□□ 0.2
LINC00996-201ENST00000477392 ZNF638Q14966 1978 aaKnown RBP16.32■□□□□ 0.2
LINC00996-201ENST00000477392 BCLAF3A2AJT9 711 aaKnown RBP16.31■□□□□ 0.2
LINC00996-201ENST00000477392 XPO1O14980 1071 aaKnown RBP16.31■□□□□ 0.2
LINC00996-201ENST00000477392 KCNN4O15554 427 aa16.31■□□□□ 0.2
LINC00996-201ENST00000477392 PRPF4O43172 522 aaKnown RBP eCLIP16.31■□□□□ 0.2
LINC00996-201ENST00000477392 SNX3O60493 162 aa16.31■□□□□ 0.2
LINC00996-201ENST00000477392 HUS1O60921 280 aa16.31■□□□□ 0.2
LINC00996-201ENST00000477392 ATP2C2O75185 946 aa16.31■□□□□ 0.2
LINC00996-201ENST00000477392 SPAG7O75391 227 aa16.31■□□□□ 0.2
LINC00996-201ENST00000477392 MAP3K6O95382 1288 aa16.31■□□□□ 0.2
LINC00996-201ENST00000477392 GNAT1P11488 350 aa16.31■□□□□ 0.2
LINC00996-201ENST00000477392 IGFBP6P24592 240 aaPredicted RBP16.31■□□□□ 0.2
LINC00996-201ENST00000477392 RBL1P28749 1068 aa16.31■□□□□ 0.2
LINC00996-201ENST00000477392 CTGFP29279 349 aa16.31■□□□□ 0.2
LINC00996-201ENST00000477392 PHBP35232 272 aa16.31■□□□□ 0.2
LINC00996-201ENST00000477392 GEMIN4P57678 1058 aaKnown RBP16.31■□□□□ 0.2
LINC00996-201ENST00000477392 ACTN3Q08043 901 aaPredicted RBP16.31■□□□□ 0.2
LINC00996-201ENST00000477392 PPP6R3Q5H9R7 873 aaPredicted RBP16.31■□□□□ 0.2
LINC00996-201ENST00000477392 CCDC185Q8N715 623 aa16.31■□□□□ 0.2
LINC00996-201ENST00000477392 DENND1AQ8TEH3 1009 aa16.31■□□□□ 0.2
LINC00996-201ENST00000477392 SOCS4Q8WXH5 440 aa16.31■□□□□ 0.2
LINC00996-201ENST00000477392 MRRFQ96E11 262 aaKnown RBP16.31■□□□□ 0.2
LINC00996-201ENST00000477392 ZFP42Q96MM3 310 aa16.31■□□□□ 0.2
LINC00996-201ENST00000477392 KCTD15Q96SI1 283 aaPredicted RBP16.31■□□□□ 0.2
LINC00996-201ENST00000477392 PAK5Q9P286 719 aa16.31■□□□□ 0.2
LINC00996-201ENST00000477392 AP4E1Q9UPM8 1137 aa16.31■□□□□ 0.2
LINC00996-201ENST00000477392 CHMP2BQ9UQN3 213 aa16.31■□□□□ 0.2
LINC00996-201ENST00000477392 TSC2P49815 1807 aa16.31■□□□□ 0.2
LINC00996-201ENST00000477392 GOLGA6L7A0A1B0GV03 622 aa16.31■□□□□ 0.2
LINC00996-201ENST00000477392 CFAP69A5D8W1 941 aa16.31■□□□□ 0.2
LINC00996-201ENST00000477392 MEIS3P2A8K0S8 358 aa16.31■□□□□ 0.2
LINC00996-201ENST00000477392 DNM1LO00429 736 aa16.31■□□□□ 0.2
LINC00996-201ENST00000477392 CHADO15335 359 aa16.31■□□□□ 0.2
LINC00996-201ENST00000477392 TSHRP16473 764 aa16.31■□□□□ 0.2
LINC00996-201ENST00000477392 STX2P32856 288 aa16.31■□□□□ 0.2
LINC00996-201ENST00000477392 MRPS6P82932 125 aaKnown RBP16.31■□□□□ 0.2
LINC00996-201ENST00000477392 LACTB2Q53H82 288 aaPredicted RBP16.31■□□□□ 0.2
LINC00996-201ENST00000477392 C3orf62Q6ZUJ4 267 aa16.31■□□□□ 0.2
LINC00996-201ENST00000477392 PACS2Q86VP3 889 aa16.31■□□□□ 0.2
LINC00996-201ENST00000477392 IFNL1Q8IU54 200 aa16.31■□□□□ 0.2
LINC00996-201ENST00000477392 FUKQ8N0W3 1084 aa16.31■□□□□ 0.2
LINC00996-201ENST00000477392 AGGF1Q8N302 714 aaeCLIP16.31■□□□□ 0.2
LINC00996-201ENST00000477392 FBF1Q8TES7 1133 aa16.31■□□□□ 0.2
LINC00996-201ENST00000477392 LRRN4Q8WUT4 740 aa16.31■□□□□ 0.2
LINC00996-201ENST00000477392 TNIP3Q96KP6 325 aa16.31■□□□□ 0.2
LINC00996-201ENST00000477392 MAGEB18Q96M61 343 aa16.31■□□□□ 0.2
LINC00996-201ENST00000477392 HNRNPABQ99729 332 aaKnown RBP16.31■□□□□ 0.2
LINC00996-201ENST00000477392 DHX35Q9H5Z1 703 aaKnown RBP16.31■□□□□ 0.2
LINC00996-201ENST00000477392 CAPN7Q9Y6W3 813 aa16.31■□□□□ 0.2
LINC00996-201ENST00000477392 PCNTO95613 3336 aa16.3■□□□□ 0.2
LINC00996-201ENST00000477392 CCT8L1PA6NM43 557 aa16.3■□□□□ 0.2
LINC00996-201ENST00000477392 PIAS1O75925 651 aa16.3■□□□□ 0.2
LINC00996-201ENST00000477392 AKR1A1P14550 325 aa16.3■□□□□ 0.2
LINC00996-201ENST00000477392 KRT15P19012 456 aa16.3■□□□□ 0.2
LINC00996-201ENST00000477392 FOXN2P32314 431 aa16.3■□□□□ 0.2
LINC00996-201ENST00000477392 CBLBQ13191 982 aa16.3■□□□□ 0.2
LINC00996-201ENST00000477392 SYCP2LQ5T4T6 812 aa16.3■□□□□ 0.2
LINC00996-201ENST00000477392 OTUD1Q5VV17 481 aaPredicted RBP16.3■□□□□ 0.2
LINC00996-201ENST00000477392 TAF2Q6P1X5 1199 aa16.3■□□□□ 0.2
LINC00996-201ENST00000477392 PAQR9Q6ZVX9 377 aa16.3■□□□□ 0.2
LINC00996-201ENST00000477392 PIGZQ86VD9 579 aa16.3■□□□□ 0.2
LINC00996-201ENST00000477392 ANKS4BQ8N8V4 417 aa16.3■□□□□ 0.2
LINC00996-201ENST00000477392 SGSM3Q96HU1 749 aa16.3■□□□□ 0.2
LINC00996-201ENST00000477392 TGS1Q96RS0 853 aaKnown RBP16.3■□□□□ 0.2
LINC00996-201ENST00000477392 PAFAH2Q99487 392 aa16.3■□□□□ 0.2
LINC00996-201ENST00000477392 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP16.3■□□□□ 0.2
LINC00996-201ENST00000477392 SENP1Q9P0U3 644 aa16.3■□□□□ 0.2
LINC00996-201ENST00000477392 CACNG4Q9UBN1 327 aa16.3■□□□□ 0.2
LINC00996-201ENST00000477392 GTF2IRD1Q9UHL9 959 aa16.3■□□□□ 0.2
LINC00996-201ENST00000477392 CDY2AQ9Y6F7 541 aa16.3■□□□□ 0.2
LINC00996-201ENST00000477392 A0A1W2PPM1 405 aa16.29■□□□□ 0.2
LINC00996-201ENST00000477392 CLDN5O00501 218 aa16.29■□□□□ 0.2
LINC00996-201ENST00000477392 TNPO2O14787 897 aaKnown RBP16.29■□□□□ 0.2
LINC00996-201ENST00000477392 ASMTLO95671 621 aa16.29■□□□□ 0.2
LINC00996-201ENST00000477392 ZBED1O96006 694 aa16.29■□□□□ 0.2
LINC00996-201ENST00000477392 ACAT1P24752 427 aaKnown RBP16.29■□□□□ 0.2
LINC00996-201ENST00000477392 ELK3P41970 407 aa16.29■□□□□ 0.2
LINC00996-201ENST00000477392 ADIGQ0VDE8 80 aa16.29■□□□□ 0.2
LINC00996-201ENST00000477392 SLC10A2Q12908 348 aaPredicted RBP16.29■□□□□ 0.2
LINC00996-201ENST00000477392 WSCD1Q658N2 575 aa16.29■□□□□ 0.2
LINC00996-201ENST00000477392 NUGGCQ68CJ6 796 aa16.29■□□□□ 0.2
LINC00996-201ENST00000477392 ADGRD1Q6QNK2 874 aa16.29■□□□□ 0.2
LINC00996-201ENST00000477392 C4orf33Q8N1A6 199 aa16.29■□□□□ 0.2
LINC00996-201ENST00000477392 MZB1Q8WU39 189 aa16.29■□□□□ 0.2
LINC00996-201ENST00000477392 NDRG1Q92597 394 aaKnown RBP16.29■□□□□ 0.2
LINC00996-201ENST00000477392 WNT8BQ93098 351 aa16.29■□□□□ 0.2
LINC00996-201ENST00000477392 DUSP16Q9BY84 665 aa16.29■□□□□ 0.2
LINC00996-201ENST00000477392 KDM4CQ9H3R0 1056 aa16.29■□□□□ 0.2
LINC00996-201ENST00000477392 ACTR5Q9H9F9 607 aaPredicted RBP16.29■□□□□ 0.2
LINC00996-201ENST00000477392 RAB6BQ9NRW1 208 aa16.29■□□□□ 0.2
LINC00996-201ENST00000477392 USP3Q9Y6I4 520 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms