RNA–Protein interactions for RNA: ENST00000477069.5

NUP188-205, Transcript of nucleoporin 188, humanhuman

TSL 1 (best)

Gene NUP188, Length 2,941 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-205ENST00000477069 SPRED3Q2MJR0 410 aa11.97□□□□□ -0.49
NUP188-205ENST00000477069 STRADAQ7RTN6 431 aa11.97□□□□□ -0.49
NUP188-205ENST00000477069 AGGF1Q8N302 714 aaeCLIP11.97□□□□□ -0.49
NUP188-205ENST00000477069 CCDC185Q8N715 623 aa11.97□□□□□ -0.49
NUP188-205ENST00000477069 ATP11CQ8NB49 1132 aa11.97□□□□□ -0.49
NUP188-205ENST00000477069 FBXO36Q8NEA4 188 aa11.97□□□□□ -0.49
NUP188-205ENST00000477069 MGARPQ8TDB4 240 aa11.97□□□□□ -0.49
NUP188-205ENST00000477069 TRAF3IP1Q8TDR0 691 aaPredicted RBP11.97□□□□□ -0.49
NUP188-205ENST00000477069 DENND1AQ8TEH3 1009 aa11.97□□□□□ -0.49
NUP188-205ENST00000477069 MZB1Q8WU39 189 aa11.97□□□□□ -0.49
NUP188-205ENST00000477069 ZFP42Q96MM3 310 aa11.97□□□□□ -0.49
NUP188-205ENST00000477069 UPF3AQ9H1J1 476 aaKnown RBP11.97□□□□□ -0.49
NUP188-205ENST00000477069 ACSS3Q9H6R3 686 aa11.97□□□□□ -0.49
NUP188-205ENST00000477069 NMRK2Q9NPI5 230 aa11.97□□□□□ -0.49
NUP188-205ENST00000477069 CDY2AQ9Y6F7 541 aa11.97□□□□□ -0.49
NUP188-205ENST00000477069 CFAP69A5D8W1 941 aa11.96□□□□□ -0.49
NUP188-205ENST00000477069 KIAA0754O94854 1291 aa11.96□□□□□ -0.49
NUP188-205ENST00000477069 CYP2F1P24903 491 aa11.96□□□□□ -0.49
NUP188-205ENST00000477069 BASP1P80723 227 aaKnown RBP11.96□□□□□ -0.49
NUP188-205ENST00000477069 MGAT3Q09327 533 aa11.96□□□□□ -0.49
NUP188-205ENST00000477069 CRHR2Q13324 411 aa11.96□□□□□ -0.49
NUP188-205ENST00000477069 EFTUD2Q15029 972 aaKnown RBP eCLIP11.96□□□□□ -0.491e-6■■■■■ 27.1
NUP188-205ENST00000477069 PKN2Q16513 984 aaKnown RBP11.96□□□□□ -0.49
NUP188-205ENST00000477069 TWF2Q6IBS0 349 aaKnown RBP11.96□□□□□ -0.49
NUP188-205ENST00000477069 PIGZQ86VD9 579 aa11.96□□□□□ -0.49
NUP188-205ENST00000477069 OTUD6BQ8N6M0 293 aa11.96□□□□□ -0.49
NUP188-205ENST00000477069 PYROXD1Q8WU10 500 aa11.96□□□□□ -0.49
NUP188-205ENST00000477069 PPM1EQ8WY54 764 aa11.96□□□□□ -0.49
NUP188-205ENST00000477069 CCT6BQ92526 530 aa11.96□□□□□ -0.49
NUP188-205ENST00000477069 NT5C3BQ969T7 300 aa11.96□□□□□ -0.49
NUP188-205ENST00000477069 CABS1Q96KC9 395 aa11.96□□□□□ -0.49
NUP188-205ENST00000477069 KCTD15Q96SI1 283 aaPredicted RBP11.96□□□□□ -0.49
NUP188-205ENST00000477069 MTG1Q9BT17 334 aaPredicted RBP11.96□□□□□ -0.49
NUP188-205ENST00000477069 DUSP16Q9BY84 665 aa11.96□□□□□ -0.49
NUP188-205ENST00000477069 MAGEB5Q9BZ81 275 aa11.96□□□□□ -0.49
NUP188-205ENST00000477069 KCNK9Q9NPC2 374 aa11.96□□□□□ -0.49
NUP188-205ENST00000477069 PAK5Q9P286 719 aa11.96□□□□□ -0.49
NUP188-205ENST00000477069 PSMC3IPQ9P2W1 217 aaPredicted RBP11.96□□□□□ -0.49
NUP188-205ENST00000477069 TRPV2Q9Y5S1 764 aa11.96□□□□□ -0.49
NUP188-205ENST00000477069 TEX264Q9Y6I9 313 aa11.96□□□□□ -0.49
NUP188-205ENST00000477069 POC1B-GALNT4F8VUJ3 575 aa11.96□□□□□ -0.5
NUP188-205ENST00000477069 H7C0C1 242 aa11.96□□□□□ -0.5
NUP188-205ENST00000477069 BEST1O76090 585 aa11.96□□□□□ -0.5
NUP188-205ENST00000477069 RBL1P28749 1068 aa11.96□□□□□ -0.5
NUP188-205ENST00000477069 ATP5OP48047 213 aa11.96□□□□□ -0.5
NUP188-205ENST00000477069 BCAR1P56945 870 aa11.96□□□□□ -0.5
NUP188-205ENST00000477069 GEMIN4P57678 1058 aaKnown RBP11.96□□□□□ -0.5
NUP188-205ENST00000477069 GDF6Q6KF10 455 aaPredicted RBP11.96□□□□□ -0.5
NUP188-205ENST00000477069 CAPN12Q6ZSI9 719 aa11.96□□□□□ -0.5
NUP188-205ENST00000477069 IGDCC3Q8IVU1 814 aa11.96□□□□□ -0.5
NUP188-205ENST00000477069 TAB3Q8N5C8 712 aaPredicted RBP11.96□□□□□ -0.5
NUP188-205ENST00000477069 ANKRD42Q8N9B4 389 aa11.96□□□□□ -0.5
NUP188-205ENST00000477069 CCDC197Q8NCU1 140 aa11.96□□□□□ -0.5
NUP188-205ENST00000477069 KCTD13Q8WZ19 329 aa11.96□□□□□ -0.5
NUP188-205ENST00000477069 SENP6Q9GZR1 1112 aaPredicted RBP11.96□□□□□ -0.5
NUP188-205ENST00000477069 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.96□□□□□ -0.5
NUP188-205ENST00000477069 AP4E1Q9UPM8 1137 aa11.96□□□□□ -0.5
NUP188-205ENST00000477069 PATJQ8NI35 1801 aa11.96□□□□□ -0.5
NUP188-205ENST00000477069 FAM47DPA6NHR8 397 aa11.95□□□□□ -0.5
NUP188-205ENST00000477069 CYB561D2O14569 222 aa11.95□□□□□ -0.5
NUP188-205ENST00000477069 KCNN4O15554 427 aa11.95□□□□□ -0.5
NUP188-205ENST00000477069 DAB1O75553 588 aa11.95□□□□□ -0.5
NUP188-205ENST00000477069 ASMTLO95671 621 aa11.95□□□□□ -0.5
NUP188-205ENST00000477069 CHRNA1P02708 482 aa11.95□□□□□ -0.5
NUP188-205ENST00000477069 DESP17661 470 aa11.95□□□□□ -0.5
NUP188-205ENST00000477069 RDXP35241 583 aaKnown RBP11.95□□□□□ -0.5
NUP188-205ENST00000477069 MATKP42679 507 aa11.95□□□□□ -0.5
NUP188-205ENST00000477069 LIG3P49916 1009 aa11.95□□□□□ -0.5
NUP188-205ENST00000477069 WDR4P57081 412 aaKnown RBP11.95□□□□□ -0.5
NUP188-205ENST00000477069 INHBEP58166 350 aa11.95□□□□□ -0.5
NUP188-205ENST00000477069 SLC10A2Q12908 348 aaPredicted RBP11.95□□□□□ -0.5
NUP188-205ENST00000477069 LACTB2Q53H82 288 aaPredicted RBP11.95□□□□□ -0.5
NUP188-205ENST00000477069 ADGRD1Q6QNK2 874 aa11.95□□□□□ -0.5
NUP188-205ENST00000477069 ARHGEF18Q6ZSZ5 1173 aa11.95□□□□□ -0.5
NUP188-205ENST00000477069 MAGEB18Q96M61 343 aa11.95□□□□□ -0.5
NUP188-205ENST00000477069 KIF9Q9HAQ2 790 aa11.95□□□□□ -0.5
NUP188-205ENST00000477069 ZFYVE28Q9HCC9 887 aa11.95□□□□□ -0.5
NUP188-205ENST00000477069 MLXIPLQ9NP71 852 aa11.95□□□□□ -0.5
NUP188-205ENST00000477069 FAM105AQ9NUU6 356 aa11.95□□□□□ -0.5
NUP188-205ENST00000477069 SENP1Q9P0U3 644 aa11.95□□□□□ -0.5
NUP188-205ENST00000477069 CASP8AP2Q9UKL3 1982 aa11.95□□□□□ -0.5
NUP188-205ENST00000477069 TCP11X1B4DZS4 312 aa11.95□□□□□ -0.5
NUP188-205ENST00000477069 TYROBPO43914 113 aa11.95□□□□□ -0.5
NUP188-205ENST00000477069 SNX3O60493 162 aa11.95□□□□□ -0.5
NUP188-205ENST00000477069 VIMP08670 466 aaKnown RBP11.95□□□□□ -0.5
NUP188-205ENST00000477069 C6orf222P0C671 652 aaPredicted RBP11.95□□□□□ -0.5
NUP188-205ENST00000477069 NPR3P17342 541 aa11.95□□□□□ -0.5
NUP188-205ENST00000477069 PHBP35232 272 aa11.95□□□□□ -0.5
NUP188-205ENST00000477069 ADIGQ0VDE8 80 aa11.95□□□□□ -0.5
NUP188-205ENST00000477069 XRCC4Q13426 336 aa11.95□□□□□ -0.5
NUP188-205ENST00000477069 NBPF20Q3BBV1 942 aa11.95□□□□□ -0.5
NUP188-205ENST00000477069 EFHC1Q5JVL4 640 aa11.95□□□□□ -0.5
NUP188-205ENST00000477069 WSCD1Q658N2 575 aa11.95□□□□□ -0.5
NUP188-205ENST00000477069 PPP1R21Q6ZMI0 780 aa11.95□□□□□ -0.5
NUP188-205ENST00000477069 CLEC20AQ6ZU45 233 aa11.95□□□□□ -0.5
NUP188-205ENST00000477069 PDIK1LQ8N165 341 aa11.95□□□□□ -0.5
NUP188-205ENST00000477069 FBF1Q8TES7 1133 aa11.95□□□□□ -0.5
NUP188-205ENST00000477069 DCAKDQ8WVC6 231 aa11.95□□□□□ -0.5
NUP188-205ENST00000477069 SGSM3Q96HU1 749 aa11.95□□□□□ -0.5
NUP188-205ENST00000477069 CSPG4P5Q96PW8 444 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms