RNA–Protein interactions for RNA: ENST00000476932.5

LIMS2-214, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2

Gene LIMS2, Length 2,269 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-214ENST00000476932 DCTN4Q9UJW0 460 aa21.89■■□□□ 1.09
LIMS2-214ENST00000476932 PAPSS1O43252 624 aaPredicted RBP21.89■■□□□ 1.09
LIMS2-214ENST00000476932 TROVE2P10155 538 aaKnown RBP eCLIP21.89■■□□□ 1.09
LIMS2-214ENST00000476932 PYGBP11216 843 aa21.89■■□□□ 1.09
LIMS2-214ENST00000476932 HDAC4P56524 1084 aa21.89■■□□□ 1.09
LIMS2-214ENST00000476932 BCAR1P56945 870 aa21.89■■□□□ 1.09
LIMS2-214ENST00000476932 STILQ15468 1287 aa21.89■■□□□ 1.09
LIMS2-214ENST00000476932 MTDHQ86UE4 582 aaKnown RBP21.89■■□□□ 1.09
LIMS2-214ENST00000476932 LRRC6Q86X45 466 aa21.89■■□□□ 1.09
LIMS2-214ENST00000476932 NT5DC4Q86YG4 428 aa21.89■■□□□ 1.09
LIMS2-214ENST00000476932 AFG1LQ8WV93 481 aa21.89■■□□□ 1.09
LIMS2-214ENST00000476932 NLRP7Q8WX94 980 aa21.89■■□□□ 1.09
LIMS2-214ENST00000476932 FAM111AQ96PZ2 611 aa21.89■■□□□ 1.09
LIMS2-214ENST00000476932 TBC1D10AQ9BXI6 508 aa21.89■■□□□ 1.09
LIMS2-214ENST00000476932 FAM49BQ9NUQ9 324 aa21.89■■□□□ 1.09
LIMS2-214ENST00000476932 GEMIN8Q9NWZ8 242 aaKnown RBP21.89■■□□□ 1.09
LIMS2-214ENST00000476932 ZFP69BQ9UJL9 534 aa21.89■■□□□ 1.09
LIMS2-214ENST00000476932 CFAP69A5D8W1 941 aa21.88■■□□□ 1.09
LIMS2-214ENST00000476932 CXorf49A8MYA2 514 aaPredicted RBP21.88■■□□□ 1.09
LIMS2-214ENST00000476932 TFE3P19532 575 aaPredicted RBP21.88■■□□□ 1.09
LIMS2-214ENST00000476932 GRM5P41594 1212 aa21.88■■□□□ 1.09
LIMS2-214ENST00000476932 SLC6A3Q01959 620 aa21.88■■□□□ 1.09
LIMS2-214ENST00000476932 TMEM110Q86TL2 294 aa21.88■■□□□ 1.09
LIMS2-214ENST00000476932 ACOT1Q86TX2 421 aa21.88■■□□□ 1.09
LIMS2-214ENST00000476932 PPTC7Q8NI37 304 aa21.88■■□□□ 1.09
LIMS2-214ENST00000476932 SLC35F5Q8WV83 523 aa21.88■■□□□ 1.09
LIMS2-214ENST00000476932 N4BP2L2Q92802 583 aaPredicted RBP21.88■■□□□ 1.09
LIMS2-214ENST00000476932 TBCBQ99426 244 aa21.88■■□□□ 1.09
LIMS2-214ENST00000476932 ETNK2Q9NVF9 386 aa21.88■■□□□ 1.09
LIMS2-214ENST00000476932 IKBKGQ9Y6K9 419 aa21.88■■□□□ 1.09
LIMS2-214ENST00000476932 MDM4O15151 490 aa21.87■■□□□ 1.09
LIMS2-214ENST00000476932 ZBED1O96006 694 aa21.87■■□□□ 1.09
LIMS2-214ENST00000476932 OSBPP22059 807 aa21.87■■□□□ 1.09
LIMS2-214ENST00000476932 PRKD1Q15139 912 aaPredicted RBP21.87■■□□□ 1.09
LIMS2-214ENST00000476932 SCUBE3Q8IX30 993 aa21.87■■□□□ 1.09
LIMS2-214ENST00000476932 FAM13CQ8NE31 585 aa21.87■■□□□ 1.09
LIMS2-214ENST00000476932 OPTNQ96CV9 577 aa21.87■■□□□ 1.09
LIMS2-214ENST00000476932 ZMAT2Q96NC0 199 aaKnown RBP21.87■■□□□ 1.09
LIMS2-214ENST00000476932 ZNF670Q9BS34 389 aa21.87■■□□□ 1.09
LIMS2-214ENST00000476932 TSSK1BQ9BXA7 367 aa21.87■■□□□ 1.09
LIMS2-214ENST00000476932 B3GNT5Q9BYG0 378 aa21.87■■□□□ 1.09
LIMS2-214ENST00000476932 FRMD8Q9BZ67 464 aaPredicted RBP21.87■■□□□ 1.09
LIMS2-214ENST00000476932 KCNK13Q9HB14 408 aa21.87■■□□□ 1.09
LIMS2-214ENST00000476932 GM2AP17900 193 aa21.87■■□□□ 1.09
LIMS2-214ENST00000476932 SDC4P31431 198 aa21.87■■□□□ 1.09
LIMS2-214ENST00000476932 MARCH8Q5T0T0 291 aa21.87■■□□□ 1.09
LIMS2-214ENST00000476932 CDHR3Q6ZTQ4 885 aa21.87■■□□□ 1.09
LIMS2-214ENST00000476932 ZNF534Q76KX8 674 aa21.87■■□□□ 1.09
LIMS2-214ENST00000476932 SLC26A11Q86WA9 606 aa21.87■■□□□ 1.09
LIMS2-214ENST00000476932 FBXO41Q8TF61 875 aa21.87■■□□□ 1.09
LIMS2-214ENST00000476932 CXorf56Q9H5V9 222 aa21.87■■□□□ 1.09
LIMS2-214ENST00000476932 SMYD2Q9NRG4 433 aa21.87■■□□□ 1.09
LIMS2-214ENST00000476932 ZNF638Q14966 1978 aaKnown RBP21.87■■□□□ 1.09
LIMS2-214ENST00000476932 PRKCHP24723 683 aa21.86■■□□□ 1.09
LIMS2-214ENST00000476932 EPHB2P29323 1055 aa21.86■■□□□ 1.09
LIMS2-214ENST00000476932 MAGEA3P43357 314 aa21.86■■□□□ 1.09
LIMS2-214ENST00000476932 GPATCH11Q8N954 259 aa21.86■■□□□ 1.09
LIMS2-214ENST00000476932 SHCBP1Q8NEM2 672 aa21.86■■□□□ 1.09
LIMS2-214ENST00000476932 CCDC110Q8TBZ0 833 aa21.86■■□□□ 1.09
LIMS2-214ENST00000476932 C11orf84Q9BUA3 381 aaPredicted RBP21.86■■□□□ 1.09
LIMS2-214ENST00000476932 TLE6Q9H808 572 aa21.86■■□□□ 1.09
LIMS2-214ENST00000476932 SAR1AQ9NR31 198 aa21.86■■□□□ 1.09
LIMS2-214ENST00000476932 LNPEPQ9UIQ6 1025 aa21.86■■□□□ 1.09
LIMS2-214ENST00000476932 TRIM49D1C9J1S8 452 aa21.86■■□□□ 1.09
LIMS2-214ENST00000476932 RPSAP08865 295 aaKnown RBP21.86■■□□□ 1.09
LIMS2-214ENST00000476932 SETSIPP0DME0 302 aa21.86■■□□□ 1.09
LIMS2-214ENST00000476932 BGNP21810 368 aa21.86■■□□□ 1.09
LIMS2-214ENST00000476932 TTC39BQ5VTQ0 682 aaPredicted RBP21.86■■□□□ 1.09
LIMS2-214ENST00000476932 SESTD1Q86VW0 696 aa21.86■■□□□ 1.09
LIMS2-214ENST00000476932 PPM1NQ8N819 430 aa21.86■■□□□ 1.09
LIMS2-214ENST00000476932 CDCA5Q96FF9 252 aa21.86■■□□□ 1.09
LIMS2-214ENST00000476932 LPIN3Q9BQK8 851 aa21.86■■□□□ 1.09
LIMS2-214ENST00000476932 KLC2Q9H0B6 622 aa21.86■■□□□ 1.09
LIMS2-214ENST00000476932 NRDE2Q9H7Z3 1164 aa21.86■■□□□ 1.09
LIMS2-214ENST00000476932 NKX1-2Q9UD57 310 aaPredicted RBP21.86■■□□□ 1.09
LIMS2-214ENST00000476932 ZC3H7BQ9UGR2 993 aaKnown RBP21.86■■□□□ 1.09
LIMS2-214ENST00000476932 SNX9Q9Y5X1 595 aa21.86■■□□□ 1.09
LIMS2-214ENST00000476932 PEX11AO75192 247 aa21.85■■□□□ 1.09
LIMS2-214ENST00000476932 APRTP07741 180 aa21.85■■□□□ 1.09
LIMS2-214ENST00000476932 ZNF792Q3KQV3 632 aa21.85■■□□□ 1.09
LIMS2-214ENST00000476932 LONP2Q86WA8 852 aa21.85■■□□□ 1.09
LIMS2-214ENST00000476932 EMID1Q96A84 441 aaPredicted RBP21.85■■□□□ 1.09
LIMS2-214ENST00000476932 TTC17Q96AE7 1141 aa21.85■■□□□ 1.09
LIMS2-214ENST00000476932 TRIM55Q9BYV6 548 aa21.85■■□□□ 1.09
LIMS2-214ENST00000476932 KATNBL1Q9H079 304 aa21.85■■□□□ 1.09
LIMS2-214ENST00000476932 TUBGCP4Q9UGJ1 667 aa21.85■■□□□ 1.09
LIMS2-214ENST00000476932 ZNF180Q9UJW8 692 aa21.85■■□□□ 1.09
LIMS2-214ENST00000476932 A0A0G2JND7 137 aa21.85■■□□□ 1.09
LIMS2-214ENST00000476932 SLC15A5A6NIM6 579 aa21.85■■□□□ 1.09
LIMS2-214ENST00000476932 ZNF487B1APH4 448 aa21.85■■□□□ 1.09
LIMS2-214ENST00000476932 UGT1A9O60656 530 aa21.85■■□□□ 1.09
LIMS2-214ENST00000476932 DIAPH2O60879 1101 aa21.85■■□□□ 1.09
LIMS2-214ENST00000476932 IL1BP01584 269 aa21.85■■□□□ 1.09
LIMS2-214ENST00000476932 SERPINB4P48594 390 aa21.85■■□□□ 1.09
LIMS2-214ENST00000476932 SLC10A2Q12908 348 aaPredicted RBP21.85■■□□□ 1.09
LIMS2-214ENST00000476932 SKA1Q96BD8 255 aa21.85■■□□□ 1.09
LIMS2-214ENST00000476932 SRPK1Q96SB4 655 aaKnown RBP21.85■■□□□ 1.09
LIMS2-214ENST00000476932 MIPEPQ99797 713 aa21.85■■□□□ 1.09
LIMS2-214ENST00000476932 MAGEB5Q9BZ81 275 aa21.85■■□□□ 1.09
LIMS2-214ENST00000476932 UGT1A7Q9HAW7 530 aa21.85■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms